Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_H24
         (634 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P19351 Cluster: Troponin T, skeletal muscle; n=46; Panc...   153   3e-36
UniRef50_UPI0000D555FF Cluster: PREDICTED: similar to CG7107-PG,...   150   2e-35
UniRef50_UPI0000DD84C4 Cluster: PREDICTED: hypothetical protein;...    36   0.81 
UniRef50_A7S562 Cluster: Predicted protein; n=1; Nematostella ve...    34   2.5  
UniRef50_UPI000023CA1F Cluster: hypothetical protein FG00284.1; ...    33   7.5  

>UniRef50_P19351 Cluster: Troponin T, skeletal muscle; n=46;
           Pancrustacea|Rep: Troponin T, skeletal muscle -
           Drosophila melanogaster (Fruit fly)
          Length = 397

 Score =  153 bits (372), Expect = 3e-36
 Identities = 82/145 (56%), Positives = 88/145 (60%), Gaps = 1/145 (0%)
 Frame = +3

Query: 201 PAPKQEGEGDPEFIKRQDQKRSDLDEQLKEYINEWRKQRAXXXXXXXXXXXXQAKRKVSX 380
           P    EGEGDPEFIKRQDQKRSDLD+QLKEYI EWRKQR+            QAKRKV+ 
Sbjct: 26  PQTPAEGEGDPEFIKRQDQKRSDLDDQLKEYITEWRKQRSKEEDELKKLKEKQAKRKVTR 85

Query: 381 XXXXXXXXXXXXXXXXXXXXXXXXXXXXDIEEKRQRLEEAEKKRQAMLQAMKDASKTGPN 560
                                       +IEEKR RLEEAEKKRQAMLQAMKD  K GPN
Sbjct: 86  AEEEQKMAQRKKEEEERRVREAEEKKQREIEEKRMRLEEAEKKRQAMLQAMKDKDKKGPN 145

Query: 561 FTIQKKSEN-FGLSNAXLERNKTKE 632
           FTI KK     GLS+A +ERNKTKE
Sbjct: 146 FTIAKKDAGVLGLSSAAMERNKTKE 170


>UniRef50_UPI0000D555FF Cluster: PREDICTED: similar to CG7107-PG,
           isoform G isoform 3; n=1; Tribolium castaneum|Rep:
           PREDICTED: similar to CG7107-PG, isoform G isoform 3 -
           Tribolium castaneum
          Length = 352

 Score =  150 bits (364), Expect = 2e-35
 Identities = 81/146 (55%), Positives = 89/146 (60%), Gaps = 1/146 (0%)
 Frame = +3

Query: 198 TPAPKQEGEGDPEFIKRQDQKRSDLDEQLKEYINEWRKQRAXXXXXXXXXXXXQAKRKVS 377
           T    +EG GDPEFIKRQDQKRSDLDEQL+EYI EWRKQRA            QAKRK+S
Sbjct: 26  TTTKVEEGAGDPEFIKRQDQKRSDLDEQLREYITEWRKQRAKEEDELKKLKEKQAKRKIS 85

Query: 378 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIEEKRQRLEEAEKKRQAMLQAMKDASKT-G 554
                                        DIEEKRQRLEEAEKKRQAM+QA+KD +K  G
Sbjct: 86  RAEEERKMAERKKQEEERRIREIEEKKQRDIEEKRQRLEEAEKKRQAMMQALKDQNKNKG 145

Query: 555 PNFTIQKKSENFGLSNAXLERNKTKE 632
           PNFTI K+  +  LS A LERNKTKE
Sbjct: 146 PNFTITKRDASSNLSAAQLERNKTKE 171


>UniRef50_UPI0000DD84C4 Cluster: PREDICTED: hypothetical protein;
           n=1; Homo sapiens|Rep: PREDICTED: hypothetical protein -
           Homo sapiens
          Length = 125

 Score = 35.9 bits (79), Expect = 0.81
 Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
 Frame = +1

Query: 13  GRPGSPRXSTFQRRCAAGPSH-QCRVPXCPTSX-RAPLNKQPT 135
           GRPG+ R S     C+A P+H + R P CP S  R+P    PT
Sbjct: 47  GRPGNRRGSGLAPGCSAAPAHSRLRSPACPPSAPRSPEPAAPT 89


>UniRef50_A7S562 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 423

 Score = 34.3 bits (75), Expect = 2.5
 Identities = 15/25 (60%), Positives = 21/25 (84%)
 Frame = +3

Query: 468 IEEKRQRLEEAEKKRQAMLQAMKDA 542
           +EE+R+RLE  EK+RQA  QAM++A
Sbjct: 140 LEEERKRLENLEKERQAAQQAMQEA 164


>UniRef50_UPI000023CA1F Cluster: hypothetical protein FG00284.1;
           n=1; Gibberella zeae PH-1|Rep: hypothetical protein
           FG00284.1 - Gibberella zeae PH-1
          Length = 1687

 Score = 32.7 bits (71), Expect = 7.5
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = +3

Query: 471 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSE 584
           EEKR R+E AEK+ +A  QAMK   +      +Q+  E
Sbjct: 231 EEKRARVEAAEKRARARQQAMKAGKQPASGPQVQQSQE 268


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 444,306,583
Number of Sequences: 1657284
Number of extensions: 6412369
Number of successful extensions: 27374
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 25588
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27296
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46881492319
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)