BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_H21
(596 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY146743-1|AAO12103.1| 192|Anopheles gambiae odorant-binding pr... 27 0.46
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 24 3.2
AY146753-1|AAO12068.1| 311|Anopheles gambiae odorant-binding pr... 24 4.3
AY146750-1|AAO12065.1| 311|Anopheles gambiae odorant-binding pr... 24 4.3
AJ439060-8|CAD27759.1| 808|Anopheles gambiae putative V-ATPase ... 24 4.3
AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr... 23 9.9
>AY146743-1|AAO12103.1| 192|Anopheles gambiae odorant-binding
protein AgamOBP11 protein.
Length = 192
Score = 27.1 bits (57), Expect = 0.46
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +2
Query: 62 FHLGKYCETINNEYMLCRQEENDP 133
F LG+ CE +N +++C Q+ + P
Sbjct: 121 FGLGECCENFSNRHLVCLQQNSLP 144
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 24.2 bits (50), Expect = 3.2
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -2
Query: 538 RXSLSVAYSPSFALFRHPVETGAEPWWFLLG 446
R LSV P+ L HP+ TG W++ G
Sbjct: 5 RPRLSVTCRPTKCL--HPLRTGRSQGWYMHG 33
>AY146753-1|AAO12068.1| 311|Anopheles gambiae odorant-binding
protein AgamOBP34 protein.
Length = 311
Score = 23.8 bits (49), Expect = 4.3
Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 3/40 (7%)
Frame = +2
Query: 146 NEGKAVTACTLEFFRKV---KKTCLAEFNQYSNCLDKSSG 256
N A T L+ +K+ K TC ++ + NC +S G
Sbjct: 234 NPNNAQTVACLQNQKKLACKKSTCQQAYDTFQNCFGESRG 273
>AY146750-1|AAO12065.1| 311|Anopheles gambiae odorant-binding
protein AgamOBP37 protein.
Length = 311
Score = 23.8 bits (49), Expect = 4.3
Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 3/40 (7%)
Frame = +2
Query: 146 NEGKAVTACTLEFFRKV---KKTCLAEFNQYSNCLDKSSG 256
N A T L+ +K+ K TC ++ + NC +S G
Sbjct: 234 NPNNAQTVACLQNQKKLACKKSTCQQAYDTFQNCFGESRG 273
>AJ439060-8|CAD27759.1| 808|Anopheles gambiae putative V-ATPase
protein.
Length = 808
Score = 23.8 bits (49), Expect = 4.3
Identities = 6/18 (33%), Positives = 15/18 (83%)
Frame = -2
Query: 319 FLKHALIKDTLSLPAMPE 266
+++ ++KD++++P MPE
Sbjct: 67 YIRREIVKDSVAIPDMPE 84
>AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine
protease protein.
Length = 1322
Score = 22.6 bits (46), Expect = 9.9
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +3
Query: 330 LAPALDISARLESTIPRDRSLYRSQRLSTRTP 425
LAPA IS+R P R L +T+TP
Sbjct: 682 LAPAPAISSRFGDNRPSWRPLIVPHATTTKTP 713
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 567,598
Number of Sequences: 2352
Number of extensions: 10601
Number of successful extensions: 25
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -