Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_H20
         (522 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF283268-1|AAG15373.1|   46|Anopheles gambiae ribosomal protein ...    65   2e-12
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    25   1.2  
AY334007-1|AAR01132.1|  202|Anopheles gambiae odorant receptor 1...    24   2.7  
AY334006-1|AAR01131.1|  202|Anopheles gambiae odorant receptor 1...    24   2.7  
AY334005-1|AAR01130.1|  202|Anopheles gambiae odorant receptor 1...    24   2.7  
AY176051-1|AAO19582.1|  522|Anopheles gambiae cytochrome P450 CY...    23   4.7  
AF364130-1|AAL35506.1|  417|Anopheles gambiae putative odorant r...    23   8.2  
AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein p...    23   8.2  

>AF283268-1|AAG15373.1|   46|Anopheles gambiae ribosomal protein S18
           protein.
          Length = 46

 Score = 64.9 bits (151), Expect = 2e-12
 Identities = 27/29 (93%), Positives = 28/29 (96%)
 Frame = +3

Query: 357 LREDLERLKKIRAHRGMRHYWGLRVRGQH 443
           LREDLERLK+I AHRGMRHYWGLRVRGQH
Sbjct: 1   LREDLERLKRIHAHRGMRHYWGLRVRGQH 29


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 12/40 (30%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +3

Query: 156 YSNIVLKKADIDLDKRAGECTEEEV-EKIITIMSNPRQYK 272
           Y+ IVL +A + LDK   +C  + +  +II +     +Y+
Sbjct: 534 YAYIVLVQAVLPLDKNLNDCNRQSILGRIIRVTDEVIEYR 573


>AY334007-1|AAR01132.1|  202|Anopheles gambiae odorant receptor 1
           protein.
          Length = 202

 Score = 24.2 bits (50), Expect = 2.7
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -3

Query: 295 LFRNQSGILYCLGFDMIVIIFSTSSSVHSPA 203
           + R+ SG+ + + F M V IF+    V SPA
Sbjct: 93  VLRSMSGVFWLMIFLMFVAIFTIIMWVMSPA 123


>AY334006-1|AAR01131.1|  202|Anopheles gambiae odorant receptor 1
           protein.
          Length = 202

 Score = 24.2 bits (50), Expect = 2.7
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -3

Query: 295 LFRNQSGILYCLGFDMIVIIFSTSSSVHSPA 203
           + R+ SG+ + + F M V IF+    V SPA
Sbjct: 93  VLRSMSGVFWLMIFLMFVAIFTIIMWVMSPA 123


>AY334005-1|AAR01130.1|  202|Anopheles gambiae odorant receptor 1
           protein.
          Length = 202

 Score = 24.2 bits (50), Expect = 2.7
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -3

Query: 295 LFRNQSGILYCLGFDMIVIIFSTSSSVHSPA 203
           + R+ SG+ + + F M V IF+    V SPA
Sbjct: 93  VLRSMSGVFWLMIFLMFVAIFTIIMWVMSPA 123


>AY176051-1|AAO19582.1|  522|Anopheles gambiae cytochrome P450
           CYP12F1 protein.
          Length = 522

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
 Frame = +3

Query: 252 SNPRQYK-IPD-WFLNRQKDIVDG-KYSQLTSSNLDSKLREDLERLKKIRAHRG 404
           SN + YK IP    L   K+  +G +Y +LT ++L ++ R+D   L +I+   G
Sbjct: 39  SNAKPYKAIPSPKLLAFAKEFKEGGRYYELTGADLFARWRQDYGDLIRIKGMFG 92


>AF364130-1|AAL35506.1|  417|Anopheles gambiae putative odorant
           receptor Or1 protein.
          Length = 417

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = -3

Query: 295 LFRNQSGILYCLGFDMIVIIFSTSSSVHSPA 203
           + ++ SG+ + + F M V IF+    V SPA
Sbjct: 127 VLQSMSGVFWLMIFLMFVAIFTIIMWVMSPA 157


>AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein
           protein.
          Length = 455

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +1

Query: 100 MANARLCLRXRLSKVLAG 153
           M  ARLCL  + +K LAG
Sbjct: 348 MKRARLCLPTKAAKQLAG 365


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 532,522
Number of Sequences: 2352
Number of extensions: 10506
Number of successful extensions: 30
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)