Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_H14
         (702 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ618927-1|CAF02006.1|  235|Anopheles gambiae odorant-binding pr...    26   1.3  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    23   7.0  
EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton anti...    23   9.3  

>AJ618927-1|CAF02006.1|  235|Anopheles gambiae odorant-binding
           protein OBPjj7a protein.
          Length = 235

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 16/68 (23%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
 Frame = +1

Query: 397 FFNQNNSEDISDIGEAKIIIADLKRKLQELENQLERYKIHSEIDTLNKNLEKSFD-NVPG 573
           F+N+   ED+ D  +  I+    +R   E+++   + K     D   +N+EK  +     
Sbjct: 23  FYNEVLMEDLLDNADEPIMFGRFRRSASEVQDDKCKRKYKCCNDANTENMEKIHEIKKQC 82

Query: 574 YSLVKNRN 597
           +  V+N+N
Sbjct: 83  FMEVRNKN 90


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = +1

Query: 415 SEDISDIGEAKIIIADLKRKLQELENQLERYKIHSEIDTLNKNLE 549
           +E  + IG A I   + +  + + E   +R +   +ID +N NLE
Sbjct: 790 AEFCARIGVANIRQFEERELVLQQERAKKRAEFEQQIDRINNNLE 834


>EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton
           antiporter protein.
          Length = 647

 Score = 23.0 bits (47), Expect = 9.3
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +3

Query: 132 PTRFKKSWNTILYASSSSWCTQTNL 206
           PT FKK + TIL      W  + +L
Sbjct: 252 PTAFKKIYKTILKLGLIPWFVECSL 276


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 691,403
Number of Sequences: 2352
Number of extensions: 13898
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71504505
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)