Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_H14
(702 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81449-11|CAD44106.2| 410|Caenorhabditis elegans Hypothetical p... 32 0.35
Z81449-10|CAB03766.4| 419|Caenorhabditis elegans Hypothetical p... 32 0.35
Z48241-6|CAD44100.2| 410|Caenorhabditis elegans Hypothetical pr... 32 0.35
Z48241-5|CAA88286.4| 419|Caenorhabditis elegans Hypothetical pr... 32 0.35
U58738-3|AAQ81272.1| 349|Caenorhabditis elegans Apex-related ge... 31 0.80
U58738-2|AAQ81271.1| 357|Caenorhabditis elegans Apex-related ge... 31 0.80
U50143-1|AAB02199.1| 349|Caenorhabditis elegans ARG-1 protein. 31 0.80
AF068721-5|AAC19259.1| 1475|Caenorhabditis elegans Holocentric c... 31 1.1
Z35602-1|CAA84669.1| 1469|Caenorhabditis elegans Hypothetical pr... 30 1.8
U80837-8|AAB37908.1| 412|Caenorhabditis elegans Hypothetical pr... 30 1.8
L35274-1|AAA62647.1| 1469|Caenorhabditis elegans chromosome cond... 30 1.8
AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical ... 30 1.8
Z73897-1|CAA98062.1| 344|Caenorhabditis elegans Hypothetical pr... 29 2.4
U00049-7|AAC47054.1| 582|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z36753-17|CAA85342.1| 821|Caenorhabditis elegans Hypothetical p... 29 4.3
AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein. 29 4.3
AF240692-1|AAF61239.1| 821|Caenorhabditis elegans LIN-5 protein. 29 4.3
AC006651-11|AAM48540.1| 428|Caenorhabditis elegans Hypothetical... 29 4.3
AC006651-10|AAF39866.2| 456|Caenorhabditis elegans Hypothetical... 29 4.3
Z19157-2|CAA79568.1| 826|Caenorhabditis elegans Hypothetical pr... 28 5.6
U07628-1|AAA17738.1| 515|Caenorhabditis elegans APX-1 protein. 28 5.6
AF101319-2|AAC69353.4| 515|Caenorhabditis elegans Anterior phar... 28 5.6
Z81466-2|CAC42256.1| 954|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z81466-1|CAB03869.1| 982|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z79694-8|CAB01965.1| 872|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z72506-9|CAA96622.1| 872|Caenorhabditis elegans Hypothetical pr... 28 7.4
X08068-1|CAA30857.1| 882|Caenorhabditis elegans paramyosin prot... 28 7.4
U55364-6|AAA97973.1| 2541|Caenorhabditis elegans Hypothetical pr... 28 7.4
AJ133374-1|CAB40208.1| 954|Caenorhabditis elegans lin-10 protei... 28 7.4
Z92777-5|CAB07171.1| 409|Caenorhabditis elegans Hypothetical pr... 27 9.8
U97006-1|AAC47965.1| 2076|Caenorhabditis elegans Hypothetical pr... 27 9.8
U00040-4|AAM22034.1| 1139|Caenorhabditis elegans Hypothetical pr... 27 9.8
>Z81449-11|CAD44106.2| 410|Caenorhabditis elegans Hypothetical
protein C32A3.3b protein.
Length = 410
Score = 32.3 bits (70), Expect = 0.35
Identities = 19/70 (27%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Frame = +1
Query: 370 TNGANVDNRFFNQNNSEDISDIGEAKIIIAD---LKRKLQELENQLERYKIHSEIDTLNK 540
T+ A D + NQ+N+E + E + +I + LK ++ ELE +L+ +K ++ + +
Sbjct: 232 TDRACKDMQLANQDNNEPRFTLSELREVIKEKNILKGRVMELEEELDNFKPGAKKEIMRL 291
Query: 541 NLEKSFDNVP 570
+ + FD P
Sbjct: 292 DDDDDFDRNP 301
>Z81449-10|CAB03766.4| 419|Caenorhabditis elegans Hypothetical
protein C32A3.3a protein.
Length = 419
Score = 32.3 bits (70), Expect = 0.35
Identities = 19/70 (27%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Frame = +1
Query: 370 TNGANVDNRFFNQNNSEDISDIGEAKIIIAD---LKRKLQELENQLERYKIHSEIDTLNK 540
T+ A D + NQ+N+E + E + +I + LK ++ ELE +L+ +K ++ + +
Sbjct: 241 TDRACKDMQLANQDNNEPRFTLSELREVIKEKNILKGRVMELEEELDNFKPGAKKEIMRL 300
Query: 541 NLEKSFDNVP 570
+ + FD P
Sbjct: 301 DDDDDFDRNP 310
>Z48241-6|CAD44100.2| 410|Caenorhabditis elegans Hypothetical
protein C32A3.3b protein.
Length = 410
Score = 32.3 bits (70), Expect = 0.35
Identities = 19/70 (27%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Frame = +1
Query: 370 TNGANVDNRFFNQNNSEDISDIGEAKIIIAD---LKRKLQELENQLERYKIHSEIDTLNK 540
T+ A D + NQ+N+E + E + +I + LK ++ ELE +L+ +K ++ + +
Sbjct: 232 TDRACKDMQLANQDNNEPRFTLSELREVIKEKNILKGRVMELEEELDNFKPGAKKEIMRL 291
Query: 541 NLEKSFDNVP 570
+ + FD P
Sbjct: 292 DDDDDFDRNP 301
>Z48241-5|CAA88286.4| 419|Caenorhabditis elegans Hypothetical
protein C32A3.3a protein.
Length = 419
Score = 32.3 bits (70), Expect = 0.35
Identities = 19/70 (27%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Frame = +1
Query: 370 TNGANVDNRFFNQNNSEDISDIGEAKIIIAD---LKRKLQELENQLERYKIHSEIDTLNK 540
T+ A D + NQ+N+E + E + +I + LK ++ ELE +L+ +K ++ + +
Sbjct: 241 TDRACKDMQLANQDNNEPRFTLSELREVIKEKNILKGRVMELEEELDNFKPGAKKEIMRL 300
Query: 541 NLEKSFDNVP 570
+ + FD P
Sbjct: 301 DDDDDFDRNP 310
>U58738-3|AAQ81272.1| 349|Caenorhabditis elegans Apex-related genes
protein 1, isoformb protein.
Length = 349
Score = 31.1 bits (67), Expect = 0.80
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Frame = -2
Query: 230 FSVGASLSEICLSTPAARRCVQYCI--PRFFKSCGFNTVLRC 111
F+V L +C S +RC +YCI P C N V +C
Sbjct: 121 FNVTVHLRNVCTSNYYGKRCNRYCIPSPALHWECSTNGVRQC 162
>U58738-2|AAQ81271.1| 357|Caenorhabditis elegans Apex-related genes
protein 1, isoforma protein.
Length = 357
Score = 31.1 bits (67), Expect = 0.80
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Frame = -2
Query: 230 FSVGASLSEICLSTPAARRCVQYCI--PRFFKSCGFNTVLRC 111
F+V L +C S +RC +YCI P C N V +C
Sbjct: 121 FNVTVHLRNVCTSNYYGKRCNRYCIPSPALHWECSTNGVRQC 162
>U50143-1|AAB02199.1| 349|Caenorhabditis elegans ARG-1 protein.
Length = 349
Score = 31.1 bits (67), Expect = 0.80
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Frame = -2
Query: 230 FSVGASLSEICLSTPAARRCVQYCI--PRFFKSCGFNTVLRC 111
F+V L +C S +RC +YCI P C N V +C
Sbjct: 121 FNVTVHLRNVCTSNYYGKRCNRYCIPSPALHWECSTNGVRQC 162
>AF068721-5|AAC19259.1| 1475|Caenorhabditis elegans Holocentric
chromosome bindingprotein protein 1 protein.
Length = 1475
Score = 30.7 bits (66), Expect = 1.1
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Frame = +1
Query: 331 DKDSNRIVNQENVTNG--ANVDN-RFFNQNNSEDISDIGEAKIIIADLKRKLQELENQLE 501
+K S I N E NG A V+ RF NNS + + + + + +++ +LENQLE
Sbjct: 467 EKASENIKNAEEKVNGLEAEVEKLRFEATNNSRVVELEQQLEEFRSLMIKEISDLENQLE 526
Query: 502 RYKIHS-EIDTLNKNLEKS 555
K+ S N LE S
Sbjct: 527 AAKLESGSTSEPNAQLEAS 545
>Z35602-1|CAA84669.1| 1469|Caenorhabditis elegans Hypothetical
protein R13G10.1 protein.
Length = 1469
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/45 (31%), Positives = 27/45 (60%)
Frame = +1
Query: 424 ISDIGEAKIIIADLKRKLQELENQLERYKIHSEIDTLNKNLEKSF 558
+ D+ E + IADLKR+++ E+Q KI +I+ + +++ F
Sbjct: 865 VEDLDEKRAQIADLKRQVE--ESQKSSAKIKQQIEQYKRKMDRMF 907
>U80837-8|AAB37908.1| 412|Caenorhabditis elegans Hypothetical
protein F07E5.9 protein.
Length = 412
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +1
Query: 337 DSNRI-VNQENVTNGANVDNRFFNQNNSEDISDIGEAKIIIADLKRKLQEL 486
D+N + +N N+ N AN DN +NQ D SD ++ L+ + EL
Sbjct: 91 DNNYVPLNGTNMANAANTDNNGYNQIGVFDRSDKRTHNYLLVQLQELVLEL 141
>L35274-1|AAA62647.1| 1469|Caenorhabditis elegans chromosome
condensation protein protein.
Length = 1469
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/45 (31%), Positives = 27/45 (60%)
Frame = +1
Query: 424 ISDIGEAKIIIADLKRKLQELENQLERYKIHSEIDTLNKNLEKSF 558
+ D+ E + IADLKR+++ E+Q KI +I+ + +++ F
Sbjct: 865 VEDLDEKRAQIADLKRQVE--ESQKSSAKIKQQIEQYKRKMDRMF 907
>AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical
protein Y113G7B.12 protein.
Length = 1042
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +1
Query: 499 ERYKIHSEIDTLNKNLEKSFDNVPGYSLVKNRNDL-INKEVQTLFGNEHKLLSKPVINFP 675
E + H +D ++ L +FD VP L+ ND ++ ++ F KL+S +
Sbjct: 879 EYVEAHKRVDLIHFKLSTAFDKVPHEFLISKLNDFNVHPTLRNWF---RKLMSPKTFSVQ 935
Query: 676 ENDQL 690
ND L
Sbjct: 936 VNDHL 940
>Z73897-1|CAA98062.1| 344|Caenorhabditis elegans Hypothetical
protein ZK617.2 protein.
Length = 344
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -2
Query: 197 LSTPAARRCVQYCIPRFFKSCGFNTVLRCLFSDIDDINQFRS 72
+S A + Q C FF C T L C ++DIN F++
Sbjct: 179 ISVAGANQGSQLCALPFFDICNMKTGLMCNSKFLEDINWFKN 220
>U00049-7|AAC47054.1| 582|Caenorhabditis elegans Hypothetical
protein C18F10.7a protein.
Length = 582
Score = 29.1 bits (62), Expect = 3.2
Identities = 22/97 (22%), Positives = 38/97 (39%), Gaps = 1/97 (1%)
Frame = +1
Query: 271 EVPPSQPVTPGRLQSSAWPPDKDSNRIVNQENVTNGANVDNRFFNQNNSED-ISDIGEAK 447
E+P + W D D N N+ V NG N R N S+D + +
Sbjct: 452 EIPDGYAIDDDGRYGITWEDDDDRNNRNNRNQVANG-NTSRRGLGNNYSDDMLLQYAIQQ 510
Query: 448 IIIADLKRKLQELENQLERYKIHSEIDTLNKNLEKSF 558
++ R+ ++ + E I +I+++ N E F
Sbjct: 511 SLLESTARQPSRVQEE-EYVDILEQIESVPVNPETDF 546
>Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical
protein T10G3.5b protein.
Length = 1203
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/45 (35%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Frame = +1
Query: 421 DISDIGEA-KIIIADLKRKLQELENQLERYKIHSEIDTLNKNLEK 552
+I+D E+ K+ + DLKR+L+ +++ + RY+I E+ L K L++
Sbjct: 197 EITDESESGKVEMEDLKRELKVVKSDVVRYEI--EVSRLEKMLDQ 239
>Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical
protein T10G3.5a protein.
Length = 1205
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/45 (35%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Frame = +1
Query: 421 DISDIGEA-KIIIADLKRKLQELENQLERYKIHSEIDTLNKNLEK 552
+I+D E+ K+ + DLKR+L+ +++ + RY+I E+ L K L++
Sbjct: 199 EITDESESGKVEMEDLKRELKVVKSDVVRYEI--EVSRLEKMLDQ 241
>Z36753-17|CAA85342.1| 821|Caenorhabditis elegans Hypothetical
protein T09A5.10 protein.
Length = 821
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +1
Query: 382 NVDNRFFNQNNSEDISDIGEAKIIIADLKRKLQELENQLERYK--IHSEIDTLNKN 543
+ +NR +NS+ SDI + K I + + + +EL LE K +H+ + LN++
Sbjct: 244 SAENRTLKLSNSDLKSDIAKLKGIAEEAQFRAEELSCDLEAKKDEVHNILQQLNES 299
>AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein.
Length = 1205
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/45 (35%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Frame = +1
Query: 421 DISDIGEA-KIIIADLKRKLQELENQLERYKIHSEIDTLNKNLEK 552
+I+D E+ K+ + DLKR+L+ +++ + RY+I E+ L K L++
Sbjct: 199 EITDESESGKVEMEDLKRELKVVKSDVVRYEI--EVSRLEKMLDQ 241
>AF240692-1|AAF61239.1| 821|Caenorhabditis elegans LIN-5 protein.
Length = 821
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +1
Query: 382 NVDNRFFNQNNSEDISDIGEAKIIIADLKRKLQELENQLERYK--IHSEIDTLNKN 543
+ +NR +NS+ SDI + K I + + + +EL LE K +H+ + LN++
Sbjct: 244 SAENRTLKLSNSDLKSDIAKLKGIAEEAQFRAEELSCDLEAKKDEVHNILQQLNES 299
>AC006651-11|AAM48540.1| 428|Caenorhabditis elegans Hypothetical
protein H06I04.1b protein.
Length = 428
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/48 (29%), Positives = 19/48 (39%)
Frame = +1
Query: 271 EVPPSQPVTPGRLQSSAWPPDKDSNRIVNQENVTNGANVDNRFFNQNN 414
E PP + + SS PP D N TN ++ + N NN
Sbjct: 10 EEPPGSSSSAKPVTSSKKPPPNDVTTTTNTTKTTNSNQQEDMYLNGNN 57
>AC006651-10|AAF39866.2| 456|Caenorhabditis elegans Hypothetical
protein H06I04.1a protein.
Length = 456
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/48 (29%), Positives = 19/48 (39%)
Frame = +1
Query: 271 EVPPSQPVTPGRLQSSAWPPDKDSNRIVNQENVTNGANVDNRFFNQNN 414
E PP + + SS PP D N TN ++ + N NN
Sbjct: 10 EEPPGSSSSAKPVTSSKKPPPNDVTTTTNTTKTTNSNQQEDMYLNGNN 57
>Z19157-2|CAA79568.1| 826|Caenorhabditis elegans Hypothetical
protein ZC84.3 protein.
Length = 826
Score = 28.3 bits (60), Expect = 5.6
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -2
Query: 287 CEGGTSIWAQ*YIRLGLNRFSV 222
C+GG +W Q Y +L LN F +
Sbjct: 625 CDGGFGVWEQCYAKLLLNLFEI 646
>U07628-1|AAA17738.1| 515|Caenorhabditis elegans APX-1 protein.
Length = 515
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Frame = -2
Query: 230 FSVGASLSEICLSTPAARRCVQYCI--PRFFKSCGFNTVLRC 111
F+V L +C S +RC +YCI + C + V RC
Sbjct: 122 FNVTVQLRNLCSSNYHGKRCNRYCIANAKLHWECSTHGVRRC 163
>AF101319-2|AAC69353.4| 515|Caenorhabditis elegans Anterior pharynx
in excess protein1 protein.
Length = 515
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Frame = -2
Query: 230 FSVGASLSEICLSTPAARRCVQYCI--PRFFKSCGFNTVLRC 111
F+V L +C S +RC +YCI + C + V RC
Sbjct: 122 FNVTVQLRNLCSSNYHGKRCNRYCIANAKLHWECSTHGVRRC 163
>Z81466-2|CAC42256.1| 954|Caenorhabditis elegans Hypothetical
protein C09H6.2b protein.
Length = 954
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +1
Query: 277 PPSQPVTPGRLQSSAWPPDKDSNRIVNQENVTNGA 381
PPS P+ P R+ + WP + N + TNGA
Sbjct: 441 PPSHPI-PRRVSGNGWPEENKENG--TSTSTTNGA 472
>Z81466-1|CAB03869.1| 982|Caenorhabditis elegans Hypothetical
protein C09H6.2a protein.
Length = 982
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +1
Query: 277 PPSQPVTPGRLQSSAWPPDKDSNRIVNQENVTNGA 381
PPS P+ P R+ + WP + N + TNGA
Sbjct: 469 PPSHPI-PRRVSGNGWPEENKENG--TSTSTTNGA 500
>Z79694-8|CAB01965.1| 872|Caenorhabditis elegans Hypothetical
protein F07A5.7 protein.
Length = 872
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = +1
Query: 406 QNNSEDISDIGEAKIIIADLKRKLQELENQLERYKIHSEIDTLNKNLEKS 555
+ N + ++ EAK +AD RKL EL+ LE ++ EI L L+++
Sbjct: 427 RENKKLHDELHEAKEALADANRKLHELD--LENARLAGEIRELQTALKEA 474
>Z72506-9|CAA96622.1| 872|Caenorhabditis elegans Hypothetical
protein F07A5.7 protein.
Length = 872
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = +1
Query: 406 QNNSEDISDIGEAKIIIADLKRKLQELENQLERYKIHSEIDTLNKNLEKS 555
+ N + ++ EAK +AD RKL EL+ LE ++ EI L L+++
Sbjct: 427 RENKKLHDELHEAKEALADANRKLHELD--LENARLAGEIRELQTALKEA 474
>X08068-1|CAA30857.1| 882|Caenorhabditis elegans paramyosin
protein.
Length = 882
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = +1
Query: 406 QNNSEDISDIGEAKIIIADLKRKLQELENQLERYKIHSEIDTLNKNLEKS 555
+ N + ++ EAK +AD RKL EL+ LE ++ EI L L+++
Sbjct: 443 RENKKLHDELHEAKEALADANRKLHELD--LENARLAGEIRELQTALKEA 490
>U55364-6|AAA97973.1| 2541|Caenorhabditis elegans Hypothetical
protein F21C10.7 protein.
Length = 2541
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/61 (22%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = +1
Query: 472 KLQEL-ENQLERYKIHSEIDTLNKNLEKSFDNVPGYSLVKNRNDLINKEVQTLFGNEHKL 648
K++++ EN+++ + ++ K+LE SFD + +L++N + N++V N ++
Sbjct: 469 KIKDISENRIQIGSTYEQVHKFGKDLEGSFDAL--QTLLENNQEYTNEKVAAQISNVFQM 526
Query: 649 L 651
+
Sbjct: 527 I 527
>AJ133374-1|CAB40208.1| 954|Caenorhabditis elegans lin-10 protein
protein.
Length = 954
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +1
Query: 277 PPSQPVTPGRLQSSAWPPDKDSNRIVNQENVTNGA 381
PPS P+ P R+ + WP + N + TNGA
Sbjct: 441 PPSHPI-PRRVSGNGWPEENKENG--TSTSTTNGA 472
>Z92777-5|CAB07171.1| 409|Caenorhabditis elegans Hypothetical
protein C17H1.7 protein.
Length = 409
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 5/44 (11%)
Frame = +1
Query: 427 SDIGEAKIIIADLKRKLQELEN---QLERYKI--HSEIDTLNKN 543
SDIG +II++ + RK+ +L++ L Y I H + + KN
Sbjct: 276 SDIGLCEIIVSSINRKISKLQDSCIDLSNYAIADHRMVQEMQKN 319
>U97006-1|AAC47965.1| 2076|Caenorhabditis elegans Hypothetical protein
C13F10.4 protein.
Length = 2076
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +1
Query: 58 FQGQMLLNWFMSSISEN-KHLKTVLNPQDLKNLGIQYCTHLLAAGVLRQISD 210
F G M+L F + + + T P ++ ++ Q C+ + +GV R +SD
Sbjct: 1337 FPGHMILEQFQAQVGAALRPAFTDDTPSNVTSVACQVCSTWIGSGVARDLSD 1388
>U00040-4|AAM22034.1| 1139|Caenorhabditis elegans Hypothetical
protein C18H2.5 protein.
Length = 1139
Score = 27.5 bits (58), Expect = 9.8
Identities = 17/64 (26%), Positives = 29/64 (45%)
Frame = +1
Query: 343 NRIVNQENVTNGANVDNRFFNQNNSEDISDIGEAKIIIADLKRKLQELENQLERYKIHSE 522
+ I+N N NG N FN+N G ++ + R+L L + +Y I S+
Sbjct: 585 SEILNSANYDNGVNDKIANFNENKQVKEFWSGSPGYLLEHVVRELDNLNMEARKY-IGSD 643
Query: 523 IDTL 534
+ T+
Sbjct: 644 LGTI 647
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,291,607
Number of Sequences: 27780
Number of extensions: 325804
Number of successful extensions: 1156
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1088
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1155
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -