Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_H13
         (396 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-2366|AAN09393.1|  352|Drosophila melanogaster CG32579-P...    28   3.9  
AY534997-1|AAT07395.1|  352|Drosophila melanogaster XK-related p...    27   9.0  
AY089582-1|AAL90320.1|  304|Drosophila melanogaster RE11615p pro...    27   9.0  
AE014297-4808|AAF57197.2|  304|Drosophila melanogaster CG2126-PA...    27   9.0  

>AE014298-2366|AAN09393.1|  352|Drosophila melanogaster CG32579-PA
           protein.
          Length = 352

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
 Frame = -1

Query: 270 KY-YYLQ*CVLKRIIASSLALAIYSVRQFIIKLHLLAISFFVI 145
           KY +YL  C+L+ IIA +L + +Y +   II L+++ I   +I
Sbjct: 297 KYAFYLTFCLLQNIIACALYIPLY-LATAIIALYIVGIVLLII 338


>AY534997-1|AAT07395.1|  352|Drosophila melanogaster XK-related
           protein.
          Length = 352

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
 Frame = -1

Query: 270 KY-YYLQ*CVLKRIIASSLALAIYSVRQFIIKLHLLAISFFVI 145
           KY +YL  C+L+ IIA +L + +Y +   II L+++ I   ++
Sbjct: 297 KYAFYLTFCLLQNIIACALYIPLY-LATAIIALYIVGIVLLIM 338


>AY089582-1|AAL90320.1|  304|Drosophila melanogaster RE11615p
           protein.
          Length = 304

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 12/36 (33%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
 Frame = -2

Query: 272 LNTIIYNNV-SLKE**LVALHWLFIP*GSS*LNYIY 168
           L  +++++V  LK   ++A+HW+ +  G + LNY Y
Sbjct: 237 LKALVHSSVWELKNVVIIAVHWMLLAYGLTSLNYHY 272


>AE014297-4808|AAF57197.2|  304|Drosophila melanogaster CG2126-PA
           protein.
          Length = 304

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 12/36 (33%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
 Frame = -2

Query: 272 LNTIIYNNV-SLKE**LVALHWLFIP*GSS*LNYIY 168
           L  +++++V  LK   ++A+HW+ +  G + LNY Y
Sbjct: 237 LKALVHSSVWELKNVVIIAVHWMLLAYGLTSLNYHY 272


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,906,227
Number of Sequences: 53049
Number of extensions: 141291
Number of successful extensions: 148
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 148
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1128794130
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)