Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_H10
(694 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23527-1|AAC46575.2| 1147|Caenorhabditis elegans Neuronal igcam ... 31 1.0
AF188751-1|AAF00548.1| 1083|Caenorhabditis elegans tyrosine kina... 31 1.0
AF078787-11|AAC26948.2| 1083|Caenorhabditis elegans Vegf (vascul... 31 1.0
Z47808-11|CAD36487.1| 928|Caenorhabditis elegans Hypothetical p... 27 1.3
Z35595-12|CAD36478.1| 928|Caenorhabditis elegans Hypothetical p... 27 1.3
AJ132946-1|CAC29084.1| 928|Caenorhabditis elegans receptor tyro... 27 1.3
Z47808-12|CAB61003.1| 902|Caenorhabditis elegans Hypothetical p... 27 1.3
Z35595-13|CAA84639.2| 902|Caenorhabditis elegans Hypothetical p... 27 1.3
AJ132947-1|CAC29085.1| 902|Caenorhabditis elegans receptor tyro... 27 1.3
Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical pr... 28 7.3
AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin pr... 28 7.3
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 27 9.6
AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated... 27 9.6
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 27 9.6
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 27 9.6
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 27 9.6
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 27 9.6
>U23527-1|AAC46575.2| 1147|Caenorhabditis elegans Neuronal igcam
protein 1, isoform a protein.
Length = 1147
Score = 30.7 bits (66), Expect = 1.0
Identities = 21/77 (27%), Positives = 36/77 (46%)
Frame = +3
Query: 225 KYTKNEQGIETLHAELPPQHIQQRLLNNVKVYWLKNNKSIEIXXXXXXXXXXXXXXXXXX 404
K T ++ IE AE + + ++N K+ W+K+N +
Sbjct: 259 KETTIDKPIELAVAE-GDDVVLECVINMAKIVWIKHNDTTP--NVTMDDNTSRFQQIWGN 315
Query: 405 LKIRNISNGDAGNYTCV 455
LKIR+++ GD+G YTC+
Sbjct: 316 LKIRSVALGDSGIYTCL 332
>AF188751-1|AAF00548.1| 1083|Caenorhabditis elegans tyrosine kinase
receptor T17A3.1 protein.
Length = 1083
Score = 30.7 bits (66), Expect = 1.0
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +3
Query: 405 LKIRNISNGDAGNYTCVYKQMYEK--KQTSLLKVEDSVDIPTHAPYFPNSNF 554
L IRN + +GNYTCV + + +++LKVE P APY + F
Sbjct: 621 LYIRNATTSASGNYTCVLENQASENFSLSTILKVE-----PIIAPYIVKTGF 667
>AF078787-11|AAC26948.2| 1083|Caenorhabditis elegans Vegf (vascular
endothelial growthfactor) receptor family protein 1
protein.
Length = 1083
Score = 30.7 bits (66), Expect = 1.0
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +3
Query: 405 LKIRNISNGDAGNYTCVYKQMYEK--KQTSLLKVEDSVDIPTHAPYFPNSNF 554
L IRN + +GNYTCV + + +++LKVE P APY + F
Sbjct: 621 LYIRNATTSASGNYTCVLENQASENFSLSTILKVE-----PIIAPYIVKTGF 667
>Z47808-11|CAD36487.1| 928|Caenorhabditis elegans Hypothetical
protein C01G6.8a protein.
Length = 928
Score = 27.5 bits (58), Expect(2) = 1.3
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +3
Query: 150 QHVTRSPGSDVRFKCEA 200
++ T+S G +VRFKCEA
Sbjct: 45 RNATKSSGDEVRFKCEA 61
Score = 21.4 bits (43), Expect(2) = 1.3
Identities = 18/70 (25%), Positives = 26/70 (37%), Gaps = 1/70 (1%)
Frame = +3
Query: 309 VKVYWLKNNKSIEIXXXXXXXXXXXXXXXXXXLKIRNISNGDAGNYTCVYKQ-MYEKKQT 485
+K WLKNN +E L I + D+G Y C+ T
Sbjct: 67 LKFIWLKNNGPVE----KTKRVKIRDKENSSRLVITQLDVLDSGYYQCIVSNPAASVNTT 122
Query: 486 SLLKVEDSVD 515
S+L+V + D
Sbjct: 123 SVLRVNNVPD 132
>Z35595-12|CAD36478.1| 928|Caenorhabditis elegans Hypothetical
protein C01G6.8a protein.
Length = 928
Score = 27.5 bits (58), Expect(2) = 1.3
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +3
Query: 150 QHVTRSPGSDVRFKCEA 200
++ T+S G +VRFKCEA
Sbjct: 45 RNATKSSGDEVRFKCEA 61
Score = 21.4 bits (43), Expect(2) = 1.3
Identities = 18/70 (25%), Positives = 26/70 (37%), Gaps = 1/70 (1%)
Frame = +3
Query: 309 VKVYWLKNNKSIEIXXXXXXXXXXXXXXXXXXLKIRNISNGDAGNYTCVYKQ-MYEKKQT 485
+K WLKNN +E L I + D+G Y C+ T
Sbjct: 67 LKFIWLKNNGPVE----KTKRVKIRDKENSSRLVITQLDVLDSGYYQCIVSNPAASVNTT 122
Query: 486 SLLKVEDSVD 515
S+L+V + D
Sbjct: 123 SVLRVNNVPD 132
>AJ132946-1|CAC29084.1| 928|Caenorhabditis elegans receptor
tyrosine kinase protein.
Length = 928
Score = 27.5 bits (58), Expect(2) = 1.3
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +3
Query: 150 QHVTRSPGSDVRFKCEA 200
++ T+S G +VRFKCEA
Sbjct: 45 RNATKSSGDEVRFKCEA 61
Score = 21.4 bits (43), Expect(2) = 1.3
Identities = 18/70 (25%), Positives = 26/70 (37%), Gaps = 1/70 (1%)
Frame = +3
Query: 309 VKVYWLKNNKSIEIXXXXXXXXXXXXXXXXXXLKIRNISNGDAGNYTCVYKQ-MYEKKQT 485
+K WLKNN +E L I + D+G Y C+ T
Sbjct: 67 LKFIWLKNNGPVE----KTKRVKIRDKENSSRLVITQLDVLDSGYYQCIVSNPAASVNTT 122
Query: 486 SLLKVEDSVD 515
S+L+V + D
Sbjct: 123 SVLRVNNVPD 132
>Z47808-12|CAB61003.1| 902|Caenorhabditis elegans Hypothetical
protein C01G6.8b protein.
Length = 902
Score = 27.5 bits (58), Expect(2) = 1.3
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +3
Query: 150 QHVTRSPGSDVRFKCEA 200
++ T+S G +VRFKCEA
Sbjct: 19 RNATKSSGDEVRFKCEA 35
Score = 21.4 bits (43), Expect(2) = 1.3
Identities = 18/70 (25%), Positives = 26/70 (37%), Gaps = 1/70 (1%)
Frame = +3
Query: 309 VKVYWLKNNKSIEIXXXXXXXXXXXXXXXXXXLKIRNISNGDAGNYTCVYKQ-MYEKKQT 485
+K WLKNN +E L I + D+G Y C+ T
Sbjct: 41 LKFIWLKNNGPVE----KTKRVKIRDKENSSRLVITQLDVLDSGYYQCIVSNPAASVNTT 96
Query: 486 SLLKVEDSVD 515
S+L+V + D
Sbjct: 97 SVLRVNNVPD 106
>Z35595-13|CAA84639.2| 902|Caenorhabditis elegans Hypothetical
protein C01G6.8b protein.
Length = 902
Score = 27.5 bits (58), Expect(2) = 1.3
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +3
Query: 150 QHVTRSPGSDVRFKCEA 200
++ T+S G +VRFKCEA
Sbjct: 19 RNATKSSGDEVRFKCEA 35
Score = 21.4 bits (43), Expect(2) = 1.3
Identities = 18/70 (25%), Positives = 26/70 (37%), Gaps = 1/70 (1%)
Frame = +3
Query: 309 VKVYWLKNNKSIEIXXXXXXXXXXXXXXXXXXLKIRNISNGDAGNYTCVYKQ-MYEKKQT 485
+K WLKNN +E L I + D+G Y C+ T
Sbjct: 41 LKFIWLKNNGPVE----KTKRVKIRDKENSSRLVITQLDVLDSGYYQCIVSNPAASVNTT 96
Query: 486 SLLKVEDSVD 515
S+L+V + D
Sbjct: 97 SVLRVNNVPD 106
>AJ132947-1|CAC29085.1| 902|Caenorhabditis elegans receptor
tyrosine kinase protein.
Length = 902
Score = 27.5 bits (58), Expect(2) = 1.3
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +3
Query: 150 QHVTRSPGSDVRFKCEA 200
++ T+S G +VRFKCEA
Sbjct: 19 RNATKSSGDEVRFKCEA 35
Score = 21.4 bits (43), Expect(2) = 1.3
Identities = 18/70 (25%), Positives = 26/70 (37%), Gaps = 1/70 (1%)
Frame = +3
Query: 309 VKVYWLKNNKSIEIXXXXXXXXXXXXXXXXXXLKIRNISNGDAGNYTCVYKQ-MYEKKQT 485
+K WLKNN +E L I + D+G Y C+ T
Sbjct: 41 LKFIWLKNNGPVE----KTKRVKIRDKENSSRLVITQLDVLDSGYYQCIVSNPAASVNTT 96
Query: 486 SLLKVEDSVD 515
S+L+V + D
Sbjct: 97 SVLRVNNVPD 106
>Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 27.9 bits (59), Expect = 7.3
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +3
Query: 405 LKIRNISNGDAGNYTC 452
LKI I GDAG YTC
Sbjct: 2348 LKITRIKEGDAGKYTC 2363
>Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 27.9 bits (59), Expect = 7.3
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +3
Query: 405 LKIRNISNGDAGNYTC 452
LKI I GDAG YTC
Sbjct: 2348 LKITRIKEGDAGKYTC 2363
>Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 27.9 bits (59), Expect = 7.3
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +3
Query: 405 LKIRNISNGDAGNYTC 452
LKI I GDAG YTC
Sbjct: 2348 LKITRIKEGDAGKYTC 2363
>Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 27.9 bits (59), Expect = 7.3
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +3
Query: 405 LKIRNISNGDAGNYTC 452
LKI I GDAG YTC
Sbjct: 2348 LKITRIKEGDAGKYTC 2363
>AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin
precursor protein.
Length = 5198
Score = 27.9 bits (59), Expect = 7.3
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +3
Query: 405 LKIRNISNGDAGNYTC 452
LKI I GDAG YTC
Sbjct: 2348 LKITRIKEGDAGKYTC 2363
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 27.5 bits (58), Expect = 9.6
Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = +3
Query: 321 WLKNNKSIE-IXXXXXXXXXXXXXXXXXXLKIRNISNGDAGNYTCV 455
WLK+ K IE I L + N++ DAG YTC+
Sbjct: 2920 WLKDGKEIELIARIRVQTRTGPEGHITQELVLDNVTPEDAGKYTCI 2965
>AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated
protein 89, isoform e protein.
Length = 5992
Score = 27.5 bits (58), Expect = 9.6
Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = +3
Query: 321 WLKNNKSIE-IXXXXXXXXXXXXXXXXXXLKIRNISNGDAGNYTCV 455
WLK+ K IE I L + N++ DAG YTC+
Sbjct: 2280 WLKDGKEIELIARIRVQTRTGPEGHITQELVLDNVTPEDAGKYTCI 2325
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 27.5 bits (58), Expect = 9.6
Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = +3
Query: 321 WLKNNKSIE-IXXXXXXXXXXXXXXXXXXLKIRNISNGDAGNYTCV 455
WLK+ K IE I L + N++ DAG YTC+
Sbjct: 2920 WLKDGKEIELIARIRVQTRTGPEGHITQELVLDNVTPEDAGKYTCI 2965
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 27.5 bits (58), Expect = 9.6
Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = +3
Query: 321 WLKNNKSIE-IXXXXXXXXXXXXXXXXXXLKIRNISNGDAGNYTCV 455
WLK+ K IE I L + N++ DAG YTC+
Sbjct: 2920 WLKDGKEIELIARIRVQTRTGPEGHITQELVLDNVTPEDAGKYTCI 2965
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 27.5 bits (58), Expect = 9.6
Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = +3
Query: 321 WLKNNKSIE-IXXXXXXXXXXXXXXXXXXLKIRNISNGDAGNYTCV 455
WLK+ K IE I L + N++ DAG YTC+
Sbjct: 2280 WLKDGKEIELIARIRVQTRTGPEGHITQELVLDNVTPEDAGKYTCI 2325
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 27.5 bits (58), Expect = 9.6
Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = +3
Query: 321 WLKNNKSIE-IXXXXXXXXXXXXXXXXXXLKIRNISNGDAGNYTCV 455
WLK+ K IE I L + N++ DAG YTC+
Sbjct: 2920 WLKDGKEIELIARIRVQTRTGPEGHITQELVLDNVTPEDAGKYTCI 2965
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,821,045
Number of Sequences: 27780
Number of extensions: 267599
Number of successful extensions: 1037
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 869
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1037
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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