Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_H06
(595 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY069570-1|AAL39715.1| 573|Drosophila melanogaster LD30822p pro... 175 4e-44
AE014297-1134|AAF54519.1| 573|Drosophila melanogaster CG6293-PA... 175 4e-44
AY052047-1|AAK93471.1| 683|Drosophila melanogaster LP06732p pro... 29 6.3
AF314193-1|AAK00302.1| 3109|Drosophila melanogaster Toutatis pro... 29 6.3
AE013599-1324|AAM68714.1| 460|Drosophila melanogaster CG10897-P... 29 6.3
AE013599-1323|AAM68712.1| 683|Drosophila melanogaster CG10897-P... 29 6.3
AE013599-1322|AAF58638.2| 3080|Drosophila melanogaster CG10897-P... 29 6.3
AE014297-996|AAF54422.3| 4671|Drosophila melanogaster CG9492-PA ... 28 8.3
>AY069570-1|AAL39715.1| 573|Drosophila melanogaster LD30822p
protein.
Length = 573
Score = 175 bits (426), Expect = 4e-44
Identities = 80/123 (65%), Positives = 96/123 (78%)
Frame = +1
Query: 223 EARKGNVTYGIDDTPPWYLCIFMALQHYLTMIGAIVAIPFILCPALCMEETDPDRSNIIS 402
E K + Y I+D PPWYL IF+A QHYLTMIGAIV+IPFIL PALCM + D +R IIS
Sbjct: 29 EKPKPQLLYAINDNPPWYLSIFLAFQHYLTMIGAIVSIPFILTPALCMSDEDANRGIIIS 88
Query: 403 TMIFVTGLITWLQATFGCRLPIVQGGTISFLVPTLAILNLPAXKCPDEEILVAMSTEXRR 582
TMIFVTG++T+ QAT+G RLPIVQGGTISFLVPTLAIL LP KCP++ ++ AM R
Sbjct: 89 TMIFVTGIVTYFQATWGVRLPIVQGGTISFLVPTLAILALPQWKCPEQAVMDAMDEAERE 148
Query: 583 QVW 591
++W
Sbjct: 149 ELW 151
>AE014297-1134|AAF54519.1| 573|Drosophila melanogaster CG6293-PA
protein.
Length = 573
Score = 175 bits (426), Expect = 4e-44
Identities = 80/123 (65%), Positives = 96/123 (78%)
Frame = +1
Query: 223 EARKGNVTYGIDDTPPWYLCIFMALQHYLTMIGAIVAIPFILCPALCMEETDPDRSNIIS 402
E K + Y I+D PPWYL IF+A QHYLTMIGAIV+IPFIL PALCM + D +R IIS
Sbjct: 29 EKPKPQLLYAINDNPPWYLSIFLAFQHYLTMIGAIVSIPFILTPALCMSDEDANRGIIIS 88
Query: 403 TMIFVTGLITWLQATFGCRLPIVQGGTISFLVPTLAILNLPAXKCPDEEILVAMSTEXRR 582
TMIFVTG++T+ QAT+G RLPIVQGGTISFLVPTLAIL LP KCP++ ++ AM R
Sbjct: 89 TMIFVTGIVTYFQATWGVRLPIVQGGTISFLVPTLAILALPQWKCPEQAVMDAMDEAERE 148
Query: 583 QVW 591
++W
Sbjct: 149 ELW 151
>AY052047-1|AAK93471.1| 683|Drosophila melanogaster LP06732p
protein.
Length = 683
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Frame = +3
Query: 303 LPDDDWGHCRDPVHPLPGS----LHGGNRSRPIQYYIYYDICHR 422
+PD DW +C + V+ + GG+R P+ IY D+C R
Sbjct: 227 IPDGDW-YCYECVNKATNERKCIVCGGHRPSPVGKMIYCDLCPR 269
>AF314193-1|AAK00302.1| 3109|Drosophila melanogaster Toutatis protein.
Length = 3109
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Frame = +3
Query: 303 LPDDDWGHCRDPVHPLPGS----LHGGNRSRPIQYYIYYDICHR 422
+PD DW +C + V+ + GG+R P+ IY D+C R
Sbjct: 2624 IPDGDW-YCYECVNKATNERKCIVCGGHRPSPVGKMIYCDLCPR 2666
>AE013599-1324|AAM68714.1| 460|Drosophila melanogaster CG10897-PD,
isoform D protein.
Length = 460
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Frame = +3
Query: 303 LPDDDWGHCRDPVHPLPGS----LHGGNRSRPIQYYIYYDICHR 422
+PD DW +C + V+ + GG+R P+ IY D+C R
Sbjct: 4 IPDGDW-YCYECVNKATNERKCIVCGGHRPSPVGKMIYCDLCPR 46
>AE013599-1323|AAM68712.1| 683|Drosophila melanogaster CG10897-PC,
isoform C protein.
Length = 683
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Frame = +3
Query: 303 LPDDDWGHCRDPVHPLPGS----LHGGNRSRPIQYYIYYDICHR 422
+PD DW +C + V+ + GG+R P+ IY D+C R
Sbjct: 227 IPDGDW-YCYECVNKATNERKCIVCGGHRPSPVGKMIYCDLCPR 269
>AE013599-1322|AAF58638.2| 3080|Drosophila melanogaster CG10897-PA,
isoform A protein.
Length = 3080
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Frame = +3
Query: 303 LPDDDWGHCRDPVHPLPGS----LHGGNRSRPIQYYIYYDICHR 422
+PD DW +C + V+ + GG+R P+ IY D+C R
Sbjct: 2624 IPDGDW-YCYECVNKATNERKCIVCGGHRPSPVGKMIYCDLCPR 2666
>AE014297-996|AAF54422.3| 4671|Drosophila melanogaster CG9492-PA
protein.
Length = 4671
Score = 28.3 bits (60), Expect = 8.3
Identities = 20/89 (22%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
Frame = -3
Query: 437 SQVIKPVTNIIVDIILDRSGSVSSMQRAGQRMNGIATMAPIIVR*CCKAMNIQRYQGGVS 258
S ++ V N+ +D ++ G++++ +RA + T +I++ K MN++ Y G
Sbjct: 2582 SILVPIVDNVRIDYLI---GTIANQERAVMVIGEQGTGKTVIMKNFMKKMNVESYMGRSF 2638
Query: 257 SIPYVTLPL---RASSGFCSPRTSLTHTP 180
+ T P R + R +T P
Sbjct: 2639 NFSSATSPYQFQRTIESYVEKRVGVTFGP 2667
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,092,552
Number of Sequences: 53049
Number of extensions: 601214
Number of successful extensions: 1376
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1342
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1376
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2400202284
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -