Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_G23
         (747 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0581 - 4153668-4153883,4154070-4155104,4155718-4156292,415...    31   0.74 
10_02_0167 - 6100676-6102111,6102174-6102708,6102967-6103975,610...    30   1.7  
12_02_0931 + 24512496-24512567,24512705-24512806,24512939-245129...    28   6.9  
04_01_0123 - 1283197-1283292,1283330-1284439,1284790-1285177,128...    28   6.9  
02_05_0849 + 32202610-32202880,32204234-32205711,32205993-322061...    28   6.9  
01_01_0598 + 4443768-4443949,4444053-4444150,4444275-4444308,444...    28   6.9  
04_03_0407 - 15542495-15543247                                         28   9.1  
03_01_0055 + 466834-467147,467521-467590,467669-467713,467801-46...    28   9.1  

>06_01_0581 -
           4153668-4153883,4154070-4155104,4155718-4156292,
           4158457-4158826,4159925-4160590,4161008-4161223,
           4161725-4161793
          Length = 1048

 Score = 31.5 bits (68), Expect = 0.74
 Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
 Frame = +2

Query: 449 IARHRDVLRQGSVQQRNQQK*TAGVVHDLRGGEQALRRRA-TPDPRASQDVVRKL 610
           +ARHRD LRQ   +  N+    A   HD+R    A+        P A+ ++V  L
Sbjct: 375 LARHRDALRQAERKSMNKSNAFASASHDIRSALAAVAGLVEVSRPEANPNIVDNL 429


>10_02_0167 -
           6100676-6102111,6102174-6102708,6102967-6103975,
           6104006-6105036
          Length = 1336

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 17/48 (35%), Positives = 27/48 (56%)
 Frame = +2

Query: 545 EQALRRRATPDPRASQDVVRKL*EEVQNARSRYTAASAIRHVKSARWD 688
           ++ L R+ATP PR + D+  ++    +  R+R  A  + RHV S R D
Sbjct: 32  QRELPRQATPPPRGTGDLRDQINGRRKARRTRDDANRSRRHVSSRRHD 79


>12_02_0931 +
           24512496-24512567,24512705-24512806,24512939-24512984,
           24513292-24513355,24513997-24514348,24514497-24514749,
           24515069-24515311,24515399-24515518,24515710-24516158
          Length = 566

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = -2

Query: 599 PHLDLRGGPGSLSAATLVHLLADRGPHQLFTS 504
           P  DL    G+L    LVH+L+D+G   + T+
Sbjct: 335 PSSDLAHSSGNLDIGELVHILSDQGRQNMVTA 366


>04_01_0123 -
           1283197-1283292,1283330-1284439,1284790-1285177,
           1285523-1287609
          Length = 1226

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +2

Query: 560 RRATPDPRASQDVVRKL*EEVQNARSRYTAASAIRHVKSARWD 688
           +RATP PR + D+  ++    +  R+R     + RHV S R D
Sbjct: 278 QRATPPPRGTGDLRDQINGRQEARRTRDNVNRSRRHVSSRRHD 320


>02_05_0849 +
           32202610-32202880,32204234-32205711,32205993-32206143,
           32206378-32206559
          Length = 693

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = +1

Query: 556 AAESDPGPPRKSRCGTKTIRRS-AKCALTIHSSLRNQTRQVCS 681
           AAES P PP + R G  ++R + A C L I + L  Q  Q  S
Sbjct: 32  AAESKPPPPPRGRFGRASVRAALAVCFLAIPAVLLLQRWQAGS 74


>01_01_0598 +
           4443768-4443949,4444053-4444150,4444275-4444308,
           4444629-4444780,4444871-4445051,4445707-4445887,
           4446034-4446142,4446324-4446451,4446758-4446832
          Length = 379

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +1

Query: 547 TSVAAESDPGPPRKSRCGTKTIRRSAKCALTIHSSL 654
           T+ AA S+P PP    CG K   +S    L ++S L
Sbjct: 24  TAAAASSEPAPPVVVVCGPKNAGKSTFSRLLLNSLL 59


>04_03_0407 - 15542495-15543247
          Length = 250

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -1

Query: 534 RSWTTPAVYFCWLRCWTDP 478
           ++ TTP  ++ WL  WTDP
Sbjct: 203 KNCTTPTPWYAWLFPWTDP 221


>03_01_0055 +
           466834-467147,467521-467590,467669-467713,467801-467869,
           468006-468059,469010-469120,469225-469358,469438-469477,
           469790-469849,469934-470115,470290-470785
          Length = 524

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = -1

Query: 585 ARGSGVALRRNACSPPRRSWTTPAVYFCWLR 493
           AR SG A  +NAC     +W +   +  W R
Sbjct: 77  ARVSGAAAEKNACPVCMEAWASQGAHRIWFR 107


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,720,374
Number of Sequences: 37544
Number of extensions: 396448
Number of successful extensions: 1059
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1026
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1059
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1980691104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)