Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_G23
(747 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC041090-1|AAH41090.1| 239|Homo sapiens NK2 homeobox 8 protein. 35 0.36
AF000297-1|AAC71082.1| 239|Homo sapiens nk-2-related transcript... 35 0.36
AF000295-1|AAC71081.1| 239|Homo sapiens nk-2-related transcript... 35 0.36
X82850-1|CAA58053.1| 371|Homo sapiens thyroid transcription fac... 34 0.62
U43203-1|AAA89066.1| 401|Homo sapiens thyroid transcription fac... 34 0.62
U33749-1|AAB52381.1| 371|Homo sapiens thyroid transcription fac... 34 0.62
U19816-1|AAC50125.1| 371|Homo sapiens thyroid transcription fac... 34 0.62
U19756-1|AAA86099.1| 371|Homo sapiens thyroid transcription fac... 34 0.62
D50740-1|BAA23529.1| 371|Homo sapiens thyroid transcriptional f... 34 0.62
D50739-1|BAA23527.1| 358|Homo sapiens thyroid transcription fac... 34 0.62
BT009773-1|AAP88775.1| 401|Homo sapiens thyroid transcription f... 34 0.62
BC006221-1|AAH06221.2| 371|Homo sapiens TITF1 protein protein. 34 0.62
AB023196-1|BAA76823.2| 1483|Homo sapiens KIAA0979 protein protein. 32 1.9
AL158013-1|CAH71494.1| 354|Homo sapiens NK2 transcription facto... 32 2.5
AF202037-1|AAG35617.1| 289|Homo sapiens homeobox transcription ... 32 2.5
BT006903-1|AAP35549.1| 289|Homo sapiens distal-less homeo box 5... 31 3.3
BC006226-1|AAH06226.1| 289|Homo sapiens distal-less homeobox 5 ... 31 3.3
AK023493-1|BAB14587.1| 289|Homo sapiens protein ( Homo sapiens ... 31 3.3
AC004774-2|AAC17833.1| 289|Homo sapiens unknown protein. 31 3.3
>BC041090-1|AAH41090.1| 239|Homo sapiens NK2 homeobox 8 protein.
Length = 239
Score = 34.7 bits (76), Expect = 0.36
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Frame = +3
Query: 576 TPAQVKMWYENYKKKCK-MRAHDTQQPPQSDTSSLL---DGMLWQSIHPLXVKEEDGEP 740
TP QVK+W++N++ K K RA + P S+ L G+L + + P+ V+ DG+P
Sbjct: 124 TPTQVKIWFQNHRYKLKRARAPGAAESPDLAASAELHAAPGLLRRVVVPVLVR--DGQP 180
>AF000297-1|AAC71082.1| 239|Homo sapiens nk-2-related transcription
factor protein.
Length = 239
Score = 34.7 bits (76), Expect = 0.36
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Frame = +3
Query: 576 TPAQVKMWYENYKKKCK-MRAHDTQQPPQSDTSSLL---DGMLWQSIHPLXVKEEDGEP 740
TP QVK+W++N++ K K RA + P S+ L G+L + + P+ V+ DG+P
Sbjct: 124 TPTQVKIWFQNHRYKLKRARAPGAAESPDLAASAELHAAPGLLRRVVVPVLVR--DGQP 180
>AF000295-1|AAC71081.1| 239|Homo sapiens nk-2-related transcription
factor protein.
Length = 239
Score = 34.7 bits (76), Expect = 0.36
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Frame = +3
Query: 576 TPAQVKMWYENYKKKCK-MRAHDTQQPPQSDTSSLL---DGMLWQSIHPLXVKEEDGEP 740
TP QVK+W++N++ K K RA + P S+ L G+L + + P+ V+ DG+P
Sbjct: 124 TPTQVKIWFQNHRYKLKRARAPGAAESPDLAASAELHAAPGLLRRVVVPVLVR--DGQP 180
>X82850-1|CAA58053.1| 371|Homo sapiens thyroid transcription factor
1 protein.
Length = 371
Score = 33.9 bits (74), Expect = 0.62
Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Frame = +3
Query: 576 TPAQVKMWYENYKKKCKMRAHD--TQQPPQSDT 668
TP QVK+W++N++ K K +A D QQ Q D+
Sbjct: 201 TPTQVKIWFQNHRYKMKRQAKDKAAQQQLQQDS 233
>U43203-1|AAA89066.1| 401|Homo sapiens thyroid transcription factor
1 protein.
Length = 401
Score = 33.9 bits (74), Expect = 0.62
Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Frame = +3
Query: 576 TPAQVKMWYENYKKKCKMRAHD--TQQPPQSDT 668
TP QVK+W++N++ K K +A D QQ Q D+
Sbjct: 231 TPTQVKIWFQNHRYKMKRQAKDKAAQQQLQQDS 263
>U33749-1|AAB52381.1| 371|Homo sapiens thyroid transcription
factor-1 protein.
Length = 371
Score = 33.9 bits (74), Expect = 0.62
Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Frame = +3
Query: 576 TPAQVKMWYENYKKKCKMRAHD--TQQPPQSDT 668
TP QVK+W++N++ K K +A D QQ Q D+
Sbjct: 201 TPTQVKIWFQNHRYKMKRQAKDKAAQQQLQQDS 233
>U19816-1|AAC50125.1| 371|Homo sapiens thyroid transcription
factor-1 protein.
Length = 371
Score = 33.9 bits (74), Expect = 0.62
Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Frame = +3
Query: 576 TPAQVKMWYENYKKKCKMRAHD--TQQPPQSDT 668
TP QVK+W++N++ K K +A D QQ Q D+
Sbjct: 201 TPTQVKIWFQNHRYKMKRQAKDKAAQQQLQQDS 233
>U19756-1|AAA86099.1| 371|Homo sapiens thyroid transcription factor
1 protein.
Length = 371
Score = 33.9 bits (74), Expect = 0.62
Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Frame = +3
Query: 576 TPAQVKMWYENYKKKCKMRAHD--TQQPPQSDT 668
TP QVK+W++N++ K K +A D QQ Q D+
Sbjct: 201 TPTQVKIWFQNHRYKMKRQAKDKAAQQQLQQDS 233
>D50740-1|BAA23529.1| 371|Homo sapiens thyroid transcriptional
factor-1 protein.
Length = 371
Score = 33.9 bits (74), Expect = 0.62
Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Frame = +3
Query: 576 TPAQVKMWYENYKKKCKMRAHD--TQQPPQSDT 668
TP QVK+W++N++ K K +A D QQ Q D+
Sbjct: 201 TPTQVKIWFQNHRYKMKRQAKDKAAQQQLQQDS 233
>D50739-1|BAA23527.1| 358|Homo sapiens thyroid transcription
factor-1 protein.
Length = 358
Score = 33.9 bits (74), Expect = 0.62
Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Frame = +3
Query: 576 TPAQVKMWYENYKKKCKMRAHD--TQQPPQSDT 668
TP QVK+W++N++ K K +A D QQ Q D+
Sbjct: 188 TPTQVKIWFQNHRYKMKRQAKDKAAQQQLQQDS 220
>BT009773-1|AAP88775.1| 401|Homo sapiens thyroid transcription
factor 1 protein.
Length = 401
Score = 33.9 bits (74), Expect = 0.62
Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Frame = +3
Query: 576 TPAQVKMWYENYKKKCKMRAHD--TQQPPQSDT 668
TP QVK+W++N++ K K +A D QQ Q D+
Sbjct: 231 TPTQVKIWFQNHRYKMKRQAKDKAAQQQLQQDS 263
>BC006221-1|AAH06221.2| 371|Homo sapiens TITF1 protein protein.
Length = 371
Score = 33.9 bits (74), Expect = 0.62
Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Frame = +3
Query: 576 TPAQVKMWYENYKKKCKMRAHD--TQQPPQSDT 668
TP QVK+W++N++ K K +A D QQ Q D+
Sbjct: 201 TPTQVKIWFQNHRYKMKRQAKDKAAQQQLQQDS 233
>AB023196-1|BAA76823.2| 1483|Homo sapiens KIAA0979 protein protein.
Length = 1483
Score = 32.3 bits (70), Expect = 1.9
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = +1
Query: 538 RR*TSVAAESDPGPPRKSRCGTKTIRRSAKCALTIHSSLRNQTRQV 675
RR AA +DPG PR R RR ++ HS R ++
Sbjct: 4 RRRLDAAAAADPGEPRSERSSESATRRGRNISVMAHSKTRTNDGKI 49
>AL158013-1|CAH71494.1| 354|Homo sapiens NK2 transcription factor
related, locus 4 (Drosophila) protein.
Length = 354
Score = 31.9 bits (69), Expect = 2.5
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +3
Query: 576 TPAQVKMWYENYKKKCKMRAHD 641
TP QVK+W++N++ K K +A D
Sbjct: 229 TPTQVKIWFQNHRYKMKRQAKD 250
>AF202037-1|AAG35617.1| 289|Homo sapiens homeobox transcription
factor protein.
Length = 289
Score = 31.9 bits (69), Expect = 2.5
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +3
Query: 576 TPAQVKMWYENYKKKCKMRAHD 641
TP QVK+W++N++ K K +A D
Sbjct: 229 TPTQVKIWFQNHRYKMKRQAKD 250
>BT006903-1|AAP35549.1| 289|Homo sapiens distal-less homeo box 5
protein.
Length = 289
Score = 31.5 bits (68), Expect = 3.3
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +3
Query: 576 TPAQVKMWYENYKKKCKMRAHDTQQPPQSDTSSLLDGMLWQSIHPLXVKEEDG 734
T QVK+W++N + K K + + PP+ SS D M S V E G
Sbjct: 177 TQTQVKIWFQNKRSKIKKIMKNGEMPPEHSPSS-SDPMACNSPQSPAVWEPQG 228
>BC006226-1|AAH06226.1| 289|Homo sapiens distal-less homeobox 5
protein.
Length = 289
Score = 31.5 bits (68), Expect = 3.3
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +3
Query: 576 TPAQVKMWYENYKKKCKMRAHDTQQPPQSDTSSLLDGMLWQSIHPLXVKEEDG 734
T QVK+W++N + K K + + PP+ SS D M S V E G
Sbjct: 177 TQTQVKIWFQNKRSKIKKIMKNGEMPPEHSPSS-SDPMACNSPQSPAVWEPQG 228
>AK023493-1|BAB14587.1| 289|Homo sapiens protein ( Homo sapiens
cDNA FLJ13431 fis, clone PLACE1002532, highly similar to
HOMEOBOX PROTEIN DLX-5. ).
Length = 289
Score = 31.5 bits (68), Expect = 3.3
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +3
Query: 576 TPAQVKMWYENYKKKCKMRAHDTQQPPQSDTSSLLDGMLWQSIHPLXVKEEDG 734
T QVK+W++N + K K + + PP+ SS D M S V E G
Sbjct: 177 TQTQVKIWFQNKRSKIKKIMKNGEMPPEHSPSS-SDPMACNSPQSPAVWEPQG 228
>AC004774-2|AAC17833.1| 289|Homo sapiens unknown protein.
Length = 289
Score = 31.5 bits (68), Expect = 3.3
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +3
Query: 576 TPAQVKMWYENYKKKCKMRAHDTQQPPQSDTSSLLDGMLWQSIHPLXVKEEDG 734
T QVK+W++N + K K + + PP+ SS D M S V E G
Sbjct: 177 TQTQVKIWFQNKRSKIKKIMKNGEMPPEHSPSS-SDPMACNSPQSPAVWEPQG 228
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,932,057
Number of Sequences: 237096
Number of extensions: 2039551
Number of successful extensions: 5068
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 4811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5063
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8959138240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -