Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_G20
         (773 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC093008-1|AAH93008.1|  206|Homo sapiens hypothetical protein MG...    63   1e-09
BC073997-1|AAH73997.1|  195|Homo sapiens peroxisomal membrane pr...    60   7e-09
AY044439-1|AAK95858.1|  195|Homo sapiens 22 kDa peroxisomal memb...    60   7e-09
AF250136-1|AAF73963.1|  195|Homo sapiens 22kDa peroxisomal membr...    60   7e-09
BC005064-1|AAH05064.1|  181|Homo sapiens FKSG24 protein protein.       39   0.023
AF416712-1|AAL16806.1|  181|Homo sapiens unknown protein.              39   0.023

>BC093008-1|AAH93008.1|  206|Homo sapiens hypothetical protein
           MGC12972 protein.
          Length = 206

 Score = 62.9 bits (146), Expect = 1e-09
 Identities = 32/102 (31%), Positives = 56/102 (54%), Gaps = 2/102 (1%)
 Frame = +2

Query: 470 HYFYETVERLFPEESA-SFP-LAKKLLLERLIFAPLMQAFSLYSLARFEGKTHRAALKQL 643
           HY+Y +++RLFP      FP + KK+L+++L+ +PL+  +    L   EG+T   + ++L
Sbjct: 77  HYWYLSLDRLFPASGLRGFPNVLKKVLVDQLVASPLLGVWYFLGLGCLEGQTVGESCQEL 136

Query: 644 FALYLPVLEANWKWLTLFQVINLAFIPPMLRVLXMNIVGFGW 769
              +    +A+W      Q +N  F+PP  RV  +N +  GW
Sbjct: 137 REKFWEFYKADWCVWPAAQFVNFLFVPPQFRVTYINGLTLGW 178


>BC073997-1|AAH73997.1|  195|Homo sapiens peroxisomal membrane
           protein 2, 22kDa protein.
          Length = 195

 Score = 60.5 bits (140), Expect = 7e-09
 Identities = 35/102 (34%), Positives = 50/102 (49%), Gaps = 2/102 (1%)
 Frame = +2

Query: 470 HYFYETVERLFPEESASFPLA--KKLLLERLIFAPLMQAFSLYSLARFEGKTHRAALKQL 643
           H+FY  +E   P E    PLA  ++LLL+RL+FAP         +   EGK   A   ++
Sbjct: 88  HFFYFFMEHWIPPE---VPLAGLRRLLLDRLVFAPAFLMLFFLIMNFLEGKDASAFAAKM 144

Query: 644 FALYLPVLEANWKWLTLFQVINLAFIPPMLRVLXMNIVGFGW 769
              + P L  NW+  T  Q IN+ ++P   RVL  N+    W
Sbjct: 145 RGGFWPALRMNWRVWTPLQFININYVPLKFRVLFANLAALFW 186


>AY044439-1|AAK95858.1|  195|Homo sapiens 22 kDa peroxisomal
           membrane protein 2 protein.
          Length = 195

 Score = 60.5 bits (140), Expect = 7e-09
 Identities = 35/102 (34%), Positives = 50/102 (49%), Gaps = 2/102 (1%)
 Frame = +2

Query: 470 HYFYETVERLFPEESASFPLA--KKLLLERLIFAPLMQAFSLYSLARFEGKTHRAALKQL 643
           H+FY  +E   P E    PLA  ++LLL+RL+FAP         +   EGK   A   ++
Sbjct: 88  HFFYFFMEHWIPPE---VPLAGLRRLLLDRLVFAPAFLMLFFLIMNFLEGKDASAFAAKM 144

Query: 644 FALYLPVLEANWKWLTLFQVINLAFIPPMLRVLXMNIVGFGW 769
              + P L  NW+  T  Q IN+ ++P   RVL  N+    W
Sbjct: 145 RGGFWPALRMNWRVWTPLQFININYVPLKFRVLFANLAALFW 186


>AF250136-1|AAF73963.1|  195|Homo sapiens 22kDa peroxisomal membrane
           protein-like protein.
          Length = 195

 Score = 60.5 bits (140), Expect = 7e-09
 Identities = 35/102 (34%), Positives = 50/102 (49%), Gaps = 2/102 (1%)
 Frame = +2

Query: 470 HYFYETVERLFPEESASFPLA--KKLLLERLIFAPLMQAFSLYSLARFEGKTHRAALKQL 643
           H+FY  +E   P E    PLA  ++LLL+RL+FAP         +   EGK   A   ++
Sbjct: 88  HFFYFFMEHWIPPE---VPLAGLRRLLLDRLVFAPAFLMLFFLIMNFLEGKDASAFAAKM 144

Query: 644 FALYLPVLEANWKWLTLFQVINLAFIPPMLRVLXMNIVGFGW 769
              + P L  NW+  T  Q IN+ ++P   RVL  N+    W
Sbjct: 145 RGGFWPALRMNWRVWTPLQFININYVPLKFRVLFANLAALFW 186


>BC005064-1|AAH05064.1|  181|Homo sapiens FKSG24 protein protein.
          Length = 181

 Score = 38.7 bits (86), Expect = 0.023
 Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 2/102 (1%)
 Frame = +2

Query: 470 HYFYETVERLFPEES-ASFP-LAKKLLLERLIFAPLMQAFSLYSLARFEGKTHRAALKQL 643
           HY+Y +++RLFP      FP + KK+L+++L+ +PL+  +  Y                 
Sbjct: 77  HYWYLSLDRLFPASGLRGFPNVLKKVLVDQLVASPLLGVWEFY----------------- 119

Query: 644 FALYLPVLEANWKWLTLFQVINLAFIPPMLRVLXMNIVGFGW 769
                   +A+W      Q +N  F+PP  RV  +N +  GW
Sbjct: 120 --------KADWCVWPAAQFVNFLFVPPQFRVTYINGLTLGW 153


>AF416712-1|AAL16806.1|  181|Homo sapiens unknown protein.
          Length = 181

 Score = 38.7 bits (86), Expect = 0.023
 Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 2/102 (1%)
 Frame = +2

Query: 470 HYFYETVERLFPEES-ASFP-LAKKLLLERLIFAPLMQAFSLYSLARFEGKTHRAALKQL 643
           HY+Y +++RLFP      FP + KK+L+++L+ +PL+  +  Y                 
Sbjct: 77  HYWYLSLDRLFPASGLRGFPNVLKKVLVDQLVASPLLGVWEFY----------------- 119

Query: 644 FALYLPVLEANWKWLTLFQVINLAFIPPMLRVLXMNIVGFGW 769
                   +A+W      Q +N  F+PP  RV  +N +  GW
Sbjct: 120 --------KADWCVWPAAQFVNFLFVPPQFRVTYINGLTLGW 153


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,719,852
Number of Sequences: 237096
Number of extensions: 1970321
Number of successful extensions: 4102
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3908
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4098
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9367263024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)