Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_G14
         (511 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132865-1|CAB60595.1|  110|Caenorhabditis elegans Hypothetical ...    69   1e-12
U97194-7|AAB52450.2|  107|Caenorhabditis elegans Hypothetical pr...    66   2e-11
Z70752-5|CAA94758.1|  901|Caenorhabditis elegans Hypothetical pr...    28   4.5  
Z70750-16|CAA94750.1|  901|Caenorhabditis elegans Hypothetical p...    28   4.5  
AF106584-6|AAC78220.1|  424|Caenorhabditis elegans Hypothetical ...    27   6.0  

>AL132865-1|CAB60595.1|  110|Caenorhabditis elegans Hypothetical
           protein Y62E10A.1 protein.
          Length = 110

 Score = 69.3 bits (162), Expect = 1e-12
 Identities = 44/112 (39%), Positives = 53/112 (47%)
 Frame = +3

Query: 30  MRYVAASLLAVLGGKPTPAAADVEXXLSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 209
           MRYV+A LLAVLGG   P   D++  LS+VG++AD E  K V++ L GK VE+LIA G  
Sbjct: 1   MRYVSAYLLAVLGGNANPKVDDLKNILSAVGVDADAETAKLVVSRLAGKTVEELIAEGSA 60

Query: 210 KLSSMPVGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGFGLFD 365
            L S  V GG                                   MGFGLFD
Sbjct: 61  GLVS--VSGGAAPAAAAAPAAGGAAPAADSKPAKKEEPKEESDDDMGFGLFD 110


>U97194-7|AAB52450.2|  107|Caenorhabditis elegans Hypothetical
           protein C37A2.7 protein.
          Length = 107

 Score = 65.7 bits (153), Expect = 2e-11
 Identities = 31/69 (44%), Positives = 44/69 (63%)
 Frame = +3

Query: 30  MRYVAASLLAVLGGKPTPAAADVEXXLSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 209
           M+Y+ A LLA LGG  +P+A DV   L + G++ D E    V+  L GK + ++IA G+ 
Sbjct: 1   MKYLGAYLLATLGGNASPSAQDVLKVLEAGGLDCDMENANSVVDALKGKTISEVIAQGKV 60

Query: 210 KLSSMPVGG 236
           KLSS+P GG
Sbjct: 61  KLSSVPSGG 69


>Z70752-5|CAA94758.1|  901|Caenorhabditis elegans Hypothetical
           protein F25B3.1 protein.
          Length = 901

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = +3

Query: 78  TPAAADVEXXLSSVGIEADGEKLKKVITEL-NGKDVEQLI 194
           TPA+A       + GI    EK+  +ITE+ N KD+E+ +
Sbjct: 445 TPASASDHRISRTFGINESEEKVVAMITEIRNQKDLEEAV 484


>Z70750-16|CAA94750.1|  901|Caenorhabditis elegans Hypothetical
           protein F25B3.1 protein.
          Length = 901

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = +3

Query: 78  TPAAADVEXXLSSVGIEADGEKLKKVITEL-NGKDVEQLI 194
           TPA+A       + GI    EK+  +ITE+ N KD+E+ +
Sbjct: 445 TPASASDHRISRTFGINESEEKVVAMITEIRNQKDLEEAV 484


>AF106584-6|AAC78220.1|  424|Caenorhabditis elegans Hypothetical
           protein F54A5.1 protein.
          Length = 424

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 19/57 (33%), Positives = 26/57 (45%)
 Frame = -1

Query: 238 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRXXSTSAAAGVGLP 68
           P P       SRP+AI  +TS   S +    +  PS S P+ L   + +   GV LP
Sbjct: 340 PSPAVSTFEVSRPSAIISATSSTTSPISIPATIIPSVS-PSALELFAMAQQLGVQLP 395


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,735,655
Number of Sequences: 27780
Number of extensions: 107437
Number of successful extensions: 365
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 361
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 365
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 988489374
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)