Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_G12
(364 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P08570 Cluster: 60S acidic ribosomal protein P1; n=15; ... 78 6e-14
UniRef50_Q16FG5 Cluster: Acidic ribosomal protein P1, putative; ... 60 1e-08
UniRef50_Q17FT7 Cluster: Acidic ribosomal protein P1, putative; ... 59 2e-08
UniRef50_P05386 Cluster: 60S acidic ribosomal protein P1; n=156;... 54 6e-07
UniRef50_P50344 Cluster: 60S acidic ribosomal protein P1; n=14; ... 53 1e-06
UniRef50_Q16VR0 Cluster: Putative uncharacterized protein; n=1; ... 52 3e-06
UniRef50_Q9FLV1 Cluster: 60s acidic ribosomal protein P1; n=1; A... 43 0.002
UniRef50_Q5DBA6 Cluster: SJCHGC09468 protein; n=1; Schistosoma j... 40 0.018
UniRef50_Q0UPB2 Cluster: Putative uncharacterized protein; n=1; ... 37 0.13
UniRef50_Q5CJB8 Cluster: Acidic ribosomal protein P1; n=3; Eimer... 36 0.17
UniRef50_Q9HFQ7 Cluster: 60S acidic ribosomal protein P1-A; n=11... 36 0.17
UniRef50_Q4N3J3 Cluster: 60S acidic ribosomal protein P1, putati... 35 0.51
UniRef50_P10622 Cluster: 60S acidic ribosomal protein P1-beta; n... 34 0.67
UniRef50_Q4QFE2 Cluster: 60S acidic ribosomal protein, putative;... 33 2.1
UniRef50_P05319 Cluster: 60S acidic ribosomal protein P2-alpha; ... 33 2.1
UniRef50_UPI0000499C26 Cluster: 60S acidic ribosomal protein P1;... 31 6.3
UniRef50_Q7R992 Cluster: Acidic ribosomal protein P1-hydromedusa... 31 6.3
UniRef50_Q7R476 Cluster: GLP_480_102976_103332; n=1; Giardia lam... 31 6.3
UniRef50_P26643 Cluster: 60S acidic ribosomal protein P1; n=4; E... 31 8.3
>UniRef50_P08570 Cluster: 60S acidic ribosomal protein P1; n=15;
Eukaryota|Rep: 60S acidic ribosomal protein P1 -
Drosophila melanogaster (Fruit fly)
Length = 112
Score = 77.8 bits (183), Expect = 6e-14
Identities = 38/74 (51%), Positives = 39/74 (52%)
Frame = +2
Query: 2 VXPYWPGLFAKALEGINVRDLITNIGSGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 181
V PYWPGLFAKALEGINV+DLITNIGSGV
Sbjct: 39 VEPYWPGLFAKALEGINVKDLITNIGSGVGAAPAGGAAPAAAAAAPAAESKKEEKKKEEE 98
Query: 182 XXXSDDDMGFGLFD 223
SDDDMGFGLFD
Sbjct: 99 SDQSDDDMGFGLFD 112
>UniRef50_Q16FG5 Cluster: Acidic ribosomal protein P1, putative;
n=2; Aedes aegypti|Rep: Acidic ribosomal protein P1,
putative - Aedes aegypti (Yellowfever mosquito)
Length = 106
Score = 60.1 bits (139), Expect = 1e-08
Identities = 25/29 (86%), Positives = 27/29 (93%)
Frame = +2
Query: 2 VXPYWPGLFAKALEGINVRDLITNIGSGV 88
+ PYWPGLF KALEGINV+DLITNIGSGV
Sbjct: 47 IEPYWPGLFTKALEGINVKDLITNIGSGV 75
>UniRef50_Q17FT7 Cluster: Acidic ribosomal protein P1, putative;
n=1; Aedes aegypti|Rep: Acidic ribosomal protein P1,
putative - Aedes aegypti (Yellowfever mosquito)
Length = 88
Score = 59.3 bits (137), Expect = 2e-08
Identities = 25/29 (86%), Positives = 27/29 (93%)
Frame = +2
Query: 2 VXPYWPGLFAKALEGINVRDLITNIGSGV 88
+ PYWP LFAKALEGINV+DLITNIGSGV
Sbjct: 10 IEPYWPALFAKALEGINVKDLITNIGSGV 38
>UniRef50_P05386 Cluster: 60S acidic ribosomal protein P1; n=156;
Eukaryota|Rep: 60S acidic ribosomal protein P1 - Homo
sapiens (Human)
Length = 114
Score = 54.4 bits (125), Expect = 6e-07
Identities = 28/76 (36%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Frame = +2
Query: 2 VXPYWPGLFAKALEGINVRDLITNIGSG--VXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 175
V P+WPGLFAKAL +N+ LI N+G+G
Sbjct: 39 VEPFWPGLFAKALANVNIGSLICNVGAGGPAPAAGAAPAGGPAPSTAAAPAEEKKVEAKK 98
Query: 176 XXXXXSDDDMGFGLFD 223
SDDDMGFGLFD
Sbjct: 99 EESEESDDDMGFGLFD 114
>UniRef50_P50344 Cluster: 60S acidic ribosomal protein P1; n=14;
Dikarya|Rep: 60S acidic ribosomal protein P1 -
Cladosporium herbarum (Davidiella tassiana)
Length = 110
Score = 53.2 bits (122), Expect = 1e-06
Identities = 28/74 (37%), Positives = 33/74 (44%)
Frame = +2
Query: 2 VXPYWPGLFAKALEGINVRDLITNIGSGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 181
+ P W LFAKALEG +V+DL+ N+GSG
Sbjct: 39 IEPIWTSLFAKALEGKDVKDLLLNVGSG--GGAAPAAGGAAAGGAAAVLDAPAEEKAEEE 96
Query: 182 XXXSDDDMGFGLFD 223
SDDDMGFGLFD
Sbjct: 97 KEESDDDMGFGLFD 110
>UniRef50_Q16VR0 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 88
Score = 52.0 bits (119), Expect = 3e-06
Identities = 23/27 (85%), Positives = 24/27 (88%)
Frame = +2
Query: 2 VXPYWPGLFAKALEGINVRDLITNIGS 82
V PYW LFAKALEGINV+DLITNIGS
Sbjct: 62 VEPYWRALFAKALEGINVKDLITNIGS 88
>UniRef50_Q9FLV1 Cluster: 60s acidic ribosomal protein P1; n=1;
Arabidopsis thaliana|Rep: 60s acidic ribosomal protein
P1 - Arabidopsis thaliana (Mouse-ear cress)
Length = 111
Score = 42.7 bits (96), Expect = 0.002
Identities = 24/74 (32%), Positives = 28/74 (37%)
Frame = +2
Query: 2 VXPYWPGLFAKALEGINVRDLITNIGSGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 181
V YWP LFAK E N+ DLI N+G+G
Sbjct: 38 VESYWPSLFAKLCEKKNIDDLIMNVGAGGCGVARPVTTAAPTASQSVSIPEEKKNEMEVI 97
Query: 182 XXXSDDDMGFGLFD 223
S+DDM GLFD
Sbjct: 98 KEESEDDMIIGLFD 111
>UniRef50_Q5DBA6 Cluster: SJCHGC09468 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09468 protein - Schistosoma
japonicum (Blood fluke)
Length = 116
Score = 39.5 bits (88), Expect = 0.018
Identities = 24/78 (30%), Positives = 30/78 (38%), Gaps = 4/78 (5%)
Frame = +2
Query: 2 VXPYWPGLFAKALEGINVRDLITNIGSGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 181
V Y P LFA +L G NV+DL+ ++GS
Sbjct: 39 VESYLPNLFATSLNGKNVKDLLMSMGSPAPSAAVTSAVPTAASATSAAAEKPKEAVKEEK 98
Query: 182 XXXSDDD----MGFGLFD 223
SDDD +GFGLFD
Sbjct: 99 KVVSDDDSDESIGFGLFD 116
>UniRef50_Q0UPB2 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 114
Score = 36.7 bits (81), Expect = 0.13
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +2
Query: 2 VXPYWPGLFAKALEGINVRDLITNIGS 82
V P W LFAKALEG +V+D++T + S
Sbjct: 40 VEPIWTTLFAKALEGKDVKDILTEVAS 66
>UniRef50_Q5CJB8 Cluster: Acidic ribosomal protein P1; n=3;
Eimeriorina|Rep: Acidic ribosomal protein P1 -
Cryptosporidium hominis
Length = 124
Score = 36.3 bits (80), Expect = 0.17
Identities = 20/76 (26%), Positives = 28/76 (36%), Gaps = 2/76 (2%)
Frame = +2
Query: 2 VXPYWPGLFAKALEGINVRDLITNIGSGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 181
V PY+PGLFA+AL NV D++ G+
Sbjct: 49 VEPYFPGLFAQALSTTNVSDIVAGCGAASVAVPVAGGAGAGAGAAQDSGASAAADDKKKK 108
Query: 182 XXXSDD--DMGFGLFD 223
++ D+GF LFD
Sbjct: 109 EEEEEEEGDLGFSLFD 124
>UniRef50_Q9HFQ7 Cluster: 60S acidic ribosomal protein P1-A; n=11;
Eukaryota|Rep: 60S acidic ribosomal protein P1-A -
Candida albicans (Yeast)
Length = 106
Score = 36.3 bits (80), Expect = 0.17
Identities = 21/70 (30%), Positives = 26/70 (37%)
Frame = +2
Query: 14 WPGLFAKALEGINVRDLITNIGSGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS 193
W LFAKALEG ++++ N + S
Sbjct: 41 WADLFAKALEGKDLKEFFFNFSAAPAAAAAGGAAGGGAAAEEAAEEEKEEEAKEE----S 96
Query: 194 DDDMGFGLFD 223
DDDMGFGLFD
Sbjct: 97 DDDMGFGLFD 106
>UniRef50_Q4N3J3 Cluster: 60S acidic ribosomal protein P1, putative;
n=2; Theileria|Rep: 60S acidic ribosomal protein P1,
putative - Theileria parva
Length = 117
Score = 34.7 bits (76), Expect = 0.51
Identities = 20/72 (27%), Positives = 29/72 (40%)
Frame = +2
Query: 8 PYWPGLFAKALEGINVRDLITNIGSGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 187
P+ P LFA+AL+G ++ L++ +GSG
Sbjct: 51 PFTPMLFARALKGKDLGSLLSAVGSG-----AAAAPAAASASSAAAPEESAKKEEKKEEE 105
Query: 188 XSDDDMGFGLFD 223
D+DMGF LFD
Sbjct: 106 EEDEDMGFSLFD 117
>UniRef50_P10622 Cluster: 60S acidic ribosomal protein P1-beta;
n=21; Ascomycota|Rep: 60S acidic ribosomal protein
P1-beta - Saccharomyces cerevisiae (Baker's yeast)
Length = 106
Score = 34.3 bits (75), Expect = 0.67
Identities = 18/70 (25%), Positives = 28/70 (40%)
Frame = +2
Query: 14 WPGLFAKALEGINVRDLITNIGSGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS 193
W ++AKALEG +++++++ + S
Sbjct: 40 WADVYAKALEGKDLKEILSGFHNA---GPVAGAGAASGAAAAGGDAAAEEEKEEEAAEES 96
Query: 194 DDDMGFGLFD 223
DDDMGFGLFD
Sbjct: 97 DDDMGFGLFD 106
>UniRef50_Q4QFE2 Cluster: 60S acidic ribosomal protein, putative;
n=8; Eukaryota|Rep: 60S acidic ribosomal protein,
putative - Leishmania major
Length = 108
Score = 32.7 bits (71), Expect = 2.1
Identities = 18/66 (27%), Positives = 24/66 (36%)
Frame = +2
Query: 26 FAKALEGINVRDLITNIGSGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDM 205
FA AL +NV +++ +I G +DDDM
Sbjct: 45 FANALAAVNVNEVLGSISFG--GAAAGGAAAPAAAAAASGAAPAAAAAKEEPEEDADDDM 102
Query: 206 GFGLFD 223
GFGLFD
Sbjct: 103 GFGLFD 108
>UniRef50_P05319 Cluster: 60S acidic ribosomal protein P2-alpha;
n=19; Eukaryota|Rep: 60S acidic ribosomal protein
P2-alpha - Saccharomyces cerevisiae (Baker's yeast)
Length = 106
Score = 32.7 bits (71), Expect = 2.1
Identities = 19/63 (30%), Positives = 22/63 (34%)
Frame = +2
Query: 35 ALEGINVRDLITNIGSGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFG 214
ALEG +V +LIT + SDDDMGFG
Sbjct: 44 ALEGKSVDELITEGNEKLAAVPAAGPASAGGAAAASGDAAAEEEKEEEAAEESDDDMGFG 103
Query: 215 LFD 223
LFD
Sbjct: 104 LFD 106
>UniRef50_UPI0000499C26 Cluster: 60S acidic ribosomal protein P1;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: 60S acidic
ribosomal protein P1 - Entamoeba histolytica HM-1:IMSS
Length = 106
Score = 31.1 bits (67), Expect = 6.3
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 2 VXPYWPGLFAKALEGINVRDLITNIGS 82
V +WP + AKAL N+ DLI + GS
Sbjct: 42 VEGFWPIIMAKALTNANIEDLIMDAGS 68
>UniRef50_Q7R992 Cluster: Acidic ribosomal protein P1-hydromedusa;
n=5; Plasmodium|Rep: Acidic ribosomal protein
P1-hydromedusa - Plasmodium yoelii yoelii
Length = 119
Score = 31.1 bits (67), Expect = 6.3
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +2
Query: 2 VXPYWPGLFAKALEGINVRDLITNIGSG 85
V PY P LF KAL+G ++ L++N+ G
Sbjct: 49 VLPYLPMLFEKALKGKDIEGLLSNLSVG 76
>UniRef50_Q7R476 Cluster: GLP_480_102976_103332; n=1; Giardia
lamblia ATCC 50803|Rep: GLP_480_102976_103332 - Giardia
lamblia ATCC 50803
Length = 118
Score = 31.1 bits (67), Expect = 6.3
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +2
Query: 2 VXPYWPGLFAKALEGINVRDLITNIGS 82
V W LFA LEG NV++L+T +GS
Sbjct: 38 VDSIWFTLFANYLEGKNVKELLTTLGS 64
>UniRef50_P26643 Cluster: 60S acidic ribosomal protein P1; n=4;
Eukaryota|Rep: 60S acidic ribosomal protein P1 -
Trypanosoma cruzi
Length = 109
Score = 30.7 bits (66), Expect = 8.3
Identities = 15/66 (22%), Positives = 23/66 (34%)
Frame = +2
Query: 26 FAKALEGINVRDLITNIGSGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDM 205
FA L+ +++ D+++ + G DDDM
Sbjct: 46 FASILKNVDINDVLSKVSFG--GVAPAAGGATAAPAAAAAAAAPAAAAAKKEEEEEDDDM 103
Query: 206 GFGLFD 223
GFGLFD
Sbjct: 104 GFGLFD 109
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,319,556
Number of Sequences: 1657284
Number of extensions: 1837776
Number of successful extensions: 4083
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 4029
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4075
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 12794443530
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -