Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_G12
(364 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17886-1|AAA36471.1| 114|Homo sapiens protein ( Human acidic ri... 54 1e-07
CR450339-1|CAG29335.1| 114|Homo sapiens RPLP1 protein. 54 1e-07
BC007590-1|AAH07590.1| 114|Homo sapiens ribosomal protein, larg... 54 1e-07
BC003369-1|AAH03369.1| 114|Homo sapiens ribosomal protein, larg... 54 1e-07
AB061836-1|BAB79474.1| 114|Homo sapiens ribosomal protein P1 pr... 54 1e-07
CR542209-1|CAG47005.1| 114|Homo sapiens RPLP1 protein. 52 4e-07
AY303789-1|AAP68820.1| 113|Homo sapiens acidic ribosomal phosph... 52 6e-07
M17887-1|AAA36472.1| 115|Homo sapiens protein ( Human acidic ri... 29 5.9
CR542248-1|CAG47044.1| 115|Homo sapiens RPLP2 protein. 29 5.9
CR542212-1|CAG47008.1| 115|Homo sapiens RPLP2 protein. 29 5.9
BC062314-1|AAH62314.1| 115|Homo sapiens ribosomal protein, larg... 29 5.9
BC007573-1|AAH07573.1| 115|Homo sapiens ribosomal protein, larg... 29 5.9
BC005920-1|AAH05920.1| 115|Homo sapiens ribosomal protein, larg... 29 5.9
BC005354-1|AAH05354.1| 115|Homo sapiens ribosomal protein, larg... 29 5.9
AB061837-1|BAB79475.1| 115|Homo sapiens ribosomal protein P2 pr... 29 5.9
>M17886-1|AAA36471.1| 114|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P1 mRNA, complete cds. ).
Length = 114
Score = 54.4 bits (125), Expect = 1e-07
Identities = 28/76 (36%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Frame = +2
Query: 2 VXPYWPGLFAKALEGINVRDLITNIGSG--VXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 175
V P+WPGLFAKAL +N+ LI N+G+G
Sbjct: 39 VEPFWPGLFAKALANVNIGSLICNVGAGGPAPAAGAAPAGGPAPSTAAAPAEEKKVEAKK 98
Query: 176 XXXXXSDDDMGFGLFD 223
SDDDMGFGLFD
Sbjct: 99 EESEESDDDMGFGLFD 114
>CR450339-1|CAG29335.1| 114|Homo sapiens RPLP1 protein.
Length = 114
Score = 54.4 bits (125), Expect = 1e-07
Identities = 28/76 (36%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Frame = +2
Query: 2 VXPYWPGLFAKALEGINVRDLITNIGSG--VXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 175
V P+WPGLFAKAL +N+ LI N+G+G
Sbjct: 39 VEPFWPGLFAKALANVNIGSLICNVGAGGPAPAAGAAPAGGPAPSTAAAPAEEKKVEAKK 98
Query: 176 XXXXXSDDDMGFGLFD 223
SDDDMGFGLFD
Sbjct: 99 EESEESDDDMGFGLFD 114
>BC007590-1|AAH07590.1| 114|Homo sapiens ribosomal protein, large,
P1 protein.
Length = 114
Score = 54.4 bits (125), Expect = 1e-07
Identities = 28/76 (36%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Frame = +2
Query: 2 VXPYWPGLFAKALEGINVRDLITNIGSG--VXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 175
V P+WPGLFAKAL +N+ LI N+G+G
Sbjct: 39 VEPFWPGLFAKALANVNIGSLICNVGAGGPAPAAGAAPAGGPAPSTAAAPAEEKKVEAKK 98
Query: 176 XXXXXSDDDMGFGLFD 223
SDDDMGFGLFD
Sbjct: 99 EESEESDDDMGFGLFD 114
>BC003369-1|AAH03369.1| 114|Homo sapiens ribosomal protein, large,
P1 protein.
Length = 114
Score = 54.4 bits (125), Expect = 1e-07
Identities = 28/76 (36%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Frame = +2
Query: 2 VXPYWPGLFAKALEGINVRDLITNIGSG--VXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 175
V P+WPGLFAKAL +N+ LI N+G+G
Sbjct: 39 VEPFWPGLFAKALANVNIGSLICNVGAGGPAPAAGAAPAGGPAPSTAAAPAEEKKVEAKK 98
Query: 176 XXXXXSDDDMGFGLFD 223
SDDDMGFGLFD
Sbjct: 99 EESEESDDDMGFGLFD 114
>AB061836-1|BAB79474.1| 114|Homo sapiens ribosomal protein P1
protein.
Length = 114
Score = 54.4 bits (125), Expect = 1e-07
Identities = 28/76 (36%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Frame = +2
Query: 2 VXPYWPGLFAKALEGINVRDLITNIGSG--VXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 175
V P+WPGLFAKAL +N+ LI N+G+G
Sbjct: 39 VEPFWPGLFAKALANVNIGSLICNVGAGGPAPAAGAAPAGGPAPSTAAAPAEEKKVEAKK 98
Query: 176 XXXXXSDDDMGFGLFD 223
SDDDMGFGLFD
Sbjct: 99 EESEESDDDMGFGLFD 114
>CR542209-1|CAG47005.1| 114|Homo sapiens RPLP1 protein.
Length = 114
Score = 52.4 bits (120), Expect = 4e-07
Identities = 27/76 (35%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Frame = +2
Query: 2 VXPYWPGLFAKALEGINVRDLITNIGSG--VXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 175
V P+WPGLFAKAL +N+ LI ++G+G
Sbjct: 39 VEPFWPGLFAKALANVNIGSLICDVGAGGPAPAAGAAPAGGPAPSTAAAPAEEKKVEAKK 98
Query: 176 XXXXXSDDDMGFGLFD 223
SDDDMGFGLFD
Sbjct: 99 EESEESDDDMGFGLFD 114
>AY303789-1|AAP68820.1| 113|Homo sapiens acidic ribosomal
phosphoprotein P1 protein.
Length = 113
Score = 52.0 bits (119), Expect = 6e-07
Identities = 27/75 (36%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Frame = +2
Query: 2 VXPYWPGLFAKALEGINVRDLITNIGSG--VXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 175
V P+WPGLFAKAL +N+ LI N+G+G
Sbjct: 39 VEPFWPGLFAKALANVNIGSLICNVGAGGPAPAAGAAPAGGPAPSTAAAPAEEKKVEAKK 98
Query: 176 XXXXXSDDDMGFGLF 220
SDDDMGFGLF
Sbjct: 99 EESEESDDDMGFGLF 113
>M17887-1|AAA36472.1| 115|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P2 mRNA, complete cds. ).
Length = 115
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +2
Query: 191 SDDDMGFGLFD 223
SDDDMGFGLFD
Sbjct: 105 SDDDMGFGLFD 115
>CR542248-1|CAG47044.1| 115|Homo sapiens RPLP2 protein.
Length = 115
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +2
Query: 191 SDDDMGFGLFD 223
SDDDMGFGLFD
Sbjct: 105 SDDDMGFGLFD 115
>CR542212-1|CAG47008.1| 115|Homo sapiens RPLP2 protein.
Length = 115
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +2
Query: 191 SDDDMGFGLFD 223
SDDDMGFGLFD
Sbjct: 105 SDDDMGFGLFD 115
>BC062314-1|AAH62314.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +2
Query: 191 SDDDMGFGLFD 223
SDDDMGFGLFD
Sbjct: 105 SDDDMGFGLFD 115
>BC007573-1|AAH07573.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +2
Query: 191 SDDDMGFGLFD 223
SDDDMGFGLFD
Sbjct: 105 SDDDMGFGLFD 115
>BC005920-1|AAH05920.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +2
Query: 191 SDDDMGFGLFD 223
SDDDMGFGLFD
Sbjct: 105 SDDDMGFGLFD 115
>BC005354-1|AAH05354.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +2
Query: 191 SDDDMGFGLFD 223
SDDDMGFGLFD
Sbjct: 105 SDDDMGFGLFD 115
>AB061837-1|BAB79475.1| 115|Homo sapiens ribosomal protein P2
protein.
Length = 115
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +2
Query: 191 SDDDMGFGLFD 223
SDDDMGFGLFD
Sbjct: 105 SDDDMGFGLFD 115
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,496,163
Number of Sequences: 237096
Number of extensions: 255460
Number of successful extensions: 430
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 421
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 424
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2248517154
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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