Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_G10
         (874 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            25   3.0  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    24   5.3  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            24   5.3  
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    24   5.3  
AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic acetylch...    24   7.0  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    24   7.0  
CR954257-9|CAJ14160.1|  573|Anopheles gambiae putative esterase ...    23   9.2  
AY070234-1|AAL58538.1|  223|Anopheles gambiae glutathione S-tran...    23   9.2  
AF080546-1|AAC29475.1|  432|Anopheles gambiae S-adenosyl-L-homoc...    23   9.2  

>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 25.0 bits (52), Expect = 3.0
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +3

Query: 501 YENDNTHILKLWQNTKNAIYG 563
           Y+ DNTH   + Q+T  A++G
Sbjct: 263 YQRDNTHYRAVAQSTSLAVFG 283


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = +3

Query: 468 SLELILKASKAYENDNTHILKLWQNTKNAIYG 563
           SL  ILK     + D T IL  W+    A+ G
Sbjct: 760 SLNDILKVGPTIQQDTTDILLRWRRRAIAVVG 791


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = +1

Query: 4   PADASICVGKQHRQSFXLKIXQILXTKHVKNHHGSQVK 117
           P DA I VGK+      LK  ++L   H  N + ++V+
Sbjct: 794 PLDAVISVGKKFVVLCDLKTLRVLTINHKGNLNDTEVQ 831


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -2

Query: 762 RRWQDEWCIGVSR 724
           RRWQD+W  G  +
Sbjct: 870 RRWQDQWTTGAGQ 882


>AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 2 protein.
          Length = 569

 Score = 23.8 bits (49), Expect = 7.0
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +1

Query: 259 PVLSHQRYSPCCIE 300
           P   H++Y PCC E
Sbjct: 224 PAERHEKYYPCCAE 237


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.8 bits (49), Expect = 7.0
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = +3

Query: 591 LANKGVTTYFSSNCTEEDSNLVNDWMKTKLIEAYICRT 704
           L + G+T   +S   EE  + VN WM+   +E    +T
Sbjct: 684 LLDPGITPEAASQRAEEAVSAVNLWMENHCLELAPAKT 721


>CR954257-9|CAJ14160.1|  573|Anopheles gambiae putative esterase
           protein.
          Length = 573

 Score = 23.4 bits (48), Expect = 9.2
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +3

Query: 384 VYAGGLFANSGNYKGFGDTKFI 449
           ++ GG   NSGN   FG  K +
Sbjct: 135 IHGGGYSINSGNSVDFGPEKLV 156


>AY070234-1|AAL58538.1|  223|Anopheles gambiae glutathione
           S-transferase E3 protein.
          Length = 223

 Score = 23.4 bits (48), Expect = 9.2
 Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 4/42 (9%)
 Frame = +3

Query: 636 EEDSNLVNDWMKTKLIEAYI----CRTFKTVADDGLPLYTIH 749
           E D   ++   K  + E Y+      T  TV D+G+PLY  H
Sbjct: 28  ELDVQYIDLAKKENMTEEYLKMNPMHTVPTVNDNGVPLYDSH 69


>AF080546-1|AAC29475.1|  432|Anopheles gambiae
           S-adenosyl-L-homocysteine hydrolase protein.
          Length = 432

 Score = 23.4 bits (48), Expect = 9.2
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = -1

Query: 601 LLAKPRLVNLGASP*MAFLVFCHNFSMCVLS 509
           LLA+ RLVNLG +   +  V  ++F+  VL+
Sbjct: 338 LLAEGRLVNLGCAMGHSSFVMSNSFTNQVLA 368


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 899,118
Number of Sequences: 2352
Number of extensions: 18550
Number of successful extensions: 89
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 87
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 89
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93439926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)