Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_G10
(874 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81494-14|CAJ43905.2| 745|Caenorhabditis elegans Hypothetical p... 187 8e-48
Z81494-8|CAB54212.3| 707|Caenorhabditis elegans Hypothetical pr... 187 8e-48
Z81057-7|CAJ43903.2| 745|Caenorhabditis elegans Hypothetical pr... 187 8e-48
Z69792-3|CAA93666.1| 284|Caenorhabditis elegans Hypothetical pr... 32 0.47
U80840-1|AAK68304.1| 498|Caenorhabditis elegans Hypothetical pr... 29 3.3
>Z81494-14|CAJ43905.2| 745|Caenorhabditis elegans Hypothetical
protein F02E9.9b protein.
Length = 745
Score = 187 bits (456), Expect = 8e-48
Identities = 91/241 (37%), Positives = 146/241 (60%)
Frame = +3
Query: 117 IFYLPNNQXFVELDSSQAFDNLTTNEKLYAHYLSQAAWNGGLIVLVQTSPESPKIFSLLH 296
++ +PN +LD++ AF L+ EK Y+HY+++A+++G L V +Q SPES IF +L+
Sbjct: 45 LYIIPNETPVCQLDAADAFKTLSEKEKKYSHYVAKASFDGALAVFLQVSPESAPIFYVLY 104
Query: 297 RVFVAEPLENLKQSALKSGVSEDDFQAFLVYAGGLFANSGNYKGFGDTKFIPNLPAESLE 476
R+F +E +E LK+ AL G ++ ++QAFLVYA ++NSGNYKGFGDTK +P + +
Sbjct: 105 RLFKSESVEQLKEKALSVGFTDAEWQAFLVYAAAFYSNSGNYKGFGDTKIVPGVEQTKIR 164
Query: 477 LILKASKAYENDNTHILKLWQNTKNAIYGLAPRLTSLGLANKGVTTYFSSNCTEEDSNLV 656
+L+ S ++ ++K W++ + I L LG +KGVT Y SSN T+ D+ +
Sbjct: 165 ALLEKSAVGTDEK--VMKTWESVEKVIGSLESNELQLGFGDKGVTCYHSSNVTKADAEKI 222
Query: 657 NDWMKTKLIEAYICRTFKTVADDGLPLYTIHLASVETSSKPPLTMDKESYKGAYFQVTRG 836
+ + K + +E++ R FK V DG YTI LA SS+ + + ++G Q+ RG
Sbjct: 223 DRFFKQRNVESWNSRLFKEVGSDGKTTYTIKLA----SSEEGIVSEAVEFEGDVVQIVRG 278
Query: 837 D 839
D
Sbjct: 279 D 279
>Z81494-8|CAB54212.3| 707|Caenorhabditis elegans Hypothetical
protein F02E9.9a protein.
Length = 707
Score = 187 bits (456), Expect = 8e-48
Identities = 91/241 (37%), Positives = 146/241 (60%)
Frame = +3
Query: 117 IFYLPNNQXFVELDSSQAFDNLTTNEKLYAHYLSQAAWNGGLIVLVQTSPESPKIFSLLH 296
++ +PN +LD++ AF L+ EK Y+HY+++A+++G L V +Q SPES IF +L+
Sbjct: 7 LYIIPNETPVCQLDAADAFKTLSEKEKKYSHYVAKASFDGALAVFLQVSPESAPIFYVLY 66
Query: 297 RVFVAEPLENLKQSALKSGVSEDDFQAFLVYAGGLFANSGNYKGFGDTKFIPNLPAESLE 476
R+F +E +E LK+ AL G ++ ++QAFLVYA ++NSGNYKGFGDTK +P + +
Sbjct: 67 RLFKSESVEQLKEKALSVGFTDAEWQAFLVYAAAFYSNSGNYKGFGDTKIVPGVEQTKIR 126
Query: 477 LILKASKAYENDNTHILKLWQNTKNAIYGLAPRLTSLGLANKGVTTYFSSNCTEEDSNLV 656
+L+ S ++ ++K W++ + I L LG +KGVT Y SSN T+ D+ +
Sbjct: 127 ALLEKSAVGTDEK--VMKTWESVEKVIGSLESNELQLGFGDKGVTCYHSSNVTKADAEKI 184
Query: 657 NDWMKTKLIEAYICRTFKTVADDGLPLYTIHLASVETSSKPPLTMDKESYKGAYFQVTRG 836
+ + K + +E++ R FK V DG YTI LA SS+ + + ++G Q+ RG
Sbjct: 185 DRFFKQRNVESWNSRLFKEVGSDGKTTYTIKLA----SSEEGIVSEAVEFEGDVVQIVRG 240
Query: 837 D 839
D
Sbjct: 241 D 241
>Z81057-7|CAJ43903.2| 745|Caenorhabditis elegans Hypothetical
protein F02E9.9b protein.
Length = 745
Score = 187 bits (456), Expect = 8e-48
Identities = 91/241 (37%), Positives = 146/241 (60%)
Frame = +3
Query: 117 IFYLPNNQXFVELDSSQAFDNLTTNEKLYAHYLSQAAWNGGLIVLVQTSPESPKIFSLLH 296
++ +PN +LD++ AF L+ EK Y+HY+++A+++G L V +Q SPES IF +L+
Sbjct: 45 LYIIPNETPVCQLDAADAFKTLSEKEKKYSHYVAKASFDGALAVFLQVSPESAPIFYVLY 104
Query: 297 RVFVAEPLENLKQSALKSGVSEDDFQAFLVYAGGLFANSGNYKGFGDTKFIPNLPAESLE 476
R+F +E +E LK+ AL G ++ ++QAFLVYA ++NSGNYKGFGDTK +P + +
Sbjct: 105 RLFKSESVEQLKEKALSVGFTDAEWQAFLVYAAAFYSNSGNYKGFGDTKIVPGVEQTKIR 164
Query: 477 LILKASKAYENDNTHILKLWQNTKNAIYGLAPRLTSLGLANKGVTTYFSSNCTEEDSNLV 656
+L+ S ++ ++K W++ + I L LG +KGVT Y SSN T+ D+ +
Sbjct: 165 ALLEKSAVGTDEK--VMKTWESVEKVIGSLESNELQLGFGDKGVTCYHSSNVTKADAEKI 222
Query: 657 NDWMKTKLIEAYICRTFKTVADDGLPLYTIHLASVETSSKPPLTMDKESYKGAYFQVTRG 836
+ + K + +E++ R FK V DG YTI LA SS+ + + ++G Q+ RG
Sbjct: 223 DRFFKQRNVESWNSRLFKEVGSDGKTTYTIKLA----SSEEGIVSEAVEFEGDVVQIVRG 278
Query: 837 D 839
D
Sbjct: 279 D 279
>Z69792-3|CAA93666.1| 284|Caenorhabditis elegans Hypothetical
protein F40E10.5 protein.
Length = 284
Score = 32.3 bits (70), Expect = 0.47
Identities = 25/86 (29%), Positives = 35/86 (40%)
Frame = +3
Query: 423 KGFGDTKFIPNLPAESLELILKASKAYENDNTHILKLWQNTKNAIYGLAPRLTSLGLANK 602
K G KFI LP+E+ E I K + Y NT K + T+N I GL A +
Sbjct: 36 KPCGIPKFINELPSEAAEKITKIWEKYVEGNT-CEKEHEETRNIIRGLTTEERDKVFAGR 94
Query: 603 GVTTYFSSNCTEEDSNLVNDWMKTKL 680
++ + + N W KL
Sbjct: 95 CGPSFLKNVSSTVREEFKNVWFDYKL 120
>U80840-1|AAK68304.1| 498|Caenorhabditis elegans Hypothetical
protein F08D12.6 protein.
Length = 498
Score = 29.5 bits (63), Expect = 3.3
Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Frame = -1
Query: 619 KYVVTPLLAKPRLVNLGASP*MAFLVFCHNFSMCVLSF-SYALDAFKINSNDS--AGKFG 449
K VTPL K R +N+ + +F N M LSF Y D + + S S A +F
Sbjct: 38 KSCVTPLRHKIRKINITVDHPLKIHIFSSNSVMTYLSFYKYNFDLWNVQSCGSIIATEFD 97
Query: 448 MNF 440
NF
Sbjct: 98 TNF 100
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,901,298
Number of Sequences: 27780
Number of extensions: 413931
Number of successful extensions: 1004
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 943
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1001
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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