Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_G10
         (874 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2 pr...    25   0.91 
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    25   0.91 
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    25   0.91 
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    25   0.91 
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    23   3.7  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    23   4.9  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    23   4.9  
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    23   4.9  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    22   8.5  

>DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2
           precursor protein.
          Length = 175

 Score = 25.0 bits (52), Expect = 0.91
 Identities = 15/50 (30%), Positives = 22/50 (44%)
 Frame = -1

Query: 778 GFDDVSTLAR*MVYRGKPSSATVLNVRQMYASMSLVFIQSLTRFESSSVQ 629
           G DD STL R  V   +P + T+L      A   +  + +L     +S Q
Sbjct: 101 GSDDYSTLIRVRVIDVRPQNETILTTVSSEADSDVTTLPTLIGKNETSTQ 150


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 25.0 bits (52), Expect = 0.91
 Identities = 15/50 (30%), Positives = 22/50 (44%)
 Frame = -1

Query: 778 GFDDVSTLAR*MVYRGKPSSATVLNVRQMYASMSLVFIQSLTRFESSSVQ 629
           G DD STL R  V   +P + T+L      A   +  + +L     +S Q
Sbjct: 149 GSDDYSTLIRVRVIDVRPQNETILTTVSSEADSDVTTLPTLIGKNETSTQ 198


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 25.0 bits (52), Expect = 0.91
 Identities = 15/50 (30%), Positives = 22/50 (44%)
 Frame = -1

Query: 778 GFDDVSTLAR*MVYRGKPSSATVLNVRQMYASMSLVFIQSLTRFESSSVQ 629
           G DD STL R  V   +P + T+L      A   +  + +L     +S Q
Sbjct: 149 GSDDYSTLIRVRVIDVRPQNETILTTVSSEADSDVTTLPTLIGKNETSTQ 198


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 25.0 bits (52), Expect = 0.91
 Identities = 15/50 (30%), Positives = 22/50 (44%)
 Frame = -1

Query: 778 GFDDVSTLAR*MVYRGKPSSATVLNVRQMYASMSLVFIQSLTRFESSSVQ 629
           G DD STL R  V   +P + T+L      A   +  + +L     +S Q
Sbjct: 149 GSDDYSTLIRVRVIDVRPQNETILTTVSSEADSDVTTLPTLIGKNETSTQ 198


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -3

Query: 677 FSFHPIVNEIRIFFGTVA*EICCYPLI 597
           F +    NEIRIF  T+     C P+I
Sbjct: 199 FDYLTDTNEIRIFVATIFTFSYCIPMI 225


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 429 NLYSYRCWQIDLLHRREKPENHLQIH 352
           N   Y C ++DLL +RE     +QI+
Sbjct: 224 NTGEYSCLKVDLLFKREFSYYLIQIY 249


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 429 NLYSYRCWQIDLLHRREKPENHLQIH 352
           N   Y C ++DLL +RE     +QI+
Sbjct: 224 NTGEYSCLKVDLLFKREFSYYLIQIY 249


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +1

Query: 259 PVLSHQRYSPCCIE 300
           P   H++Y PCC E
Sbjct: 207 PAERHKKYYPCCDE 220


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 12/40 (30%), Positives = 17/40 (42%)
 Frame = +3

Query: 105 KPSQIFYLPNNQXFVELDSSQAFDNLTTNEKLYAHYLSQA 224
           +P ++ Y P  Q    LDS    DNL         +L+ A
Sbjct: 462 RPFEVRYDPYTQRVEILDSVDRLDNLMAQVNTEMTHLTNA 501


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 240,322
Number of Sequences: 438
Number of extensions: 4864
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28280841
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)