Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_G06
(673 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56255| Best HMM Match : Arf (HMM E-Value=0) 200 1e-51
SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.) 196 1e-50
SB_11310| Best HMM Match : Arf (HMM E-Value=0) 179 2e-45
SB_53421| Best HMM Match : Arf (HMM E-Value=0) 162 2e-40
SB_37042| Best HMM Match : Arf (HMM E-Value=0) 140 7e-34
SB_32972| Best HMM Match : Arf (HMM E-Value=2.66247e-44) 140 7e-34
SB_18358| Best HMM Match : Arf (HMM E-Value=0) 122 3e-28
SB_57342| Best HMM Match : Arf (HMM E-Value=0) 118 6e-27
SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31) 115 4e-26
SB_51371| Best HMM Match : No HMM Matches (HMM E-Value=.) 113 1e-25
SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36) 113 2e-25
SB_55155| Best HMM Match : No HMM Matches (HMM E-Value=.) 100 1e-21
SB_7588| Best HMM Match : DcpS (HMM E-Value=0) 72 4e-13
SB_214| Best HMM Match : Arf (HMM E-Value=0) 71 9e-13
SB_2235| Best HMM Match : Arf (HMM E-Value=3.1e-13) 66 3e-11
SB_6793| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 7e-11
SB_31701| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 9e-09
SB_15207| Best HMM Match : Arf (HMM E-Value=1.9e-05) 57 1e-08
SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 8e-08
SB_4971| Best HMM Match : Ras (HMM E-Value=0) 49 4e-06
SB_27557| Best HMM Match : Ras (HMM E-Value=0) 48 5e-06
SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 8e-05
SB_977| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 8e-05
SB_50855| Best HMM Match : Ras (HMM E-Value=0) 44 8e-05
SB_16166| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_8302| Best HMM Match : G-alpha (HMM E-Value=0) 43 2e-04
SB_49453| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_10811| Best HMM Match : Ras (HMM E-Value=0) 42 5e-04
SB_13045| Best HMM Match : Ras (HMM E-Value=0) 42 6e-04
SB_44625| Best HMM Match : Ras (HMM E-Value=0) 41 8e-04
SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44) 40 0.001
SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21) 40 0.001
SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_38597| Best HMM Match : Arf (HMM E-Value=0.15) 31 0.006
SB_47462| Best HMM Match : Ras (HMM E-Value=0) 36 0.039
SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34) 36 0.039
SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.039
SB_54971| Best HMM Match : Ras (HMM E-Value=0) 34 0.12
SB_9680| Best HMM Match : Ank (HMM E-Value=4e-20) 32 0.37
SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10) 32 0.37
SB_49432| Best HMM Match : Ras (HMM E-Value=1.4e-12) 32 0.48
SB_45581| Best HMM Match : Ras (HMM E-Value=0.069) 32 0.48
SB_48632| Best HMM Match : DUF265 (HMM E-Value=7.6e-22) 31 0.64
SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_21165| Best HMM Match : LRR_1 (HMM E-Value=6.5e-13) 30 1.5
SB_43238| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06) 30 2.0
SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30) 29 2.6
SB_50523| Best HMM Match : Ras (HMM E-Value=0) 29 3.4
SB_19345| Best HMM Match : Arf (HMM E-Value=3.3e-05) 29 3.4
SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_16779| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_8315| Best HMM Match : Ras (HMM E-Value=0) 29 4.5
SB_12271| Best HMM Match : DUF1079 (HMM E-Value=1.2) 29 4.5
SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42) 28 6.0
SB_10598| Best HMM Match : LRR_1 (HMM E-Value=4.4e-19) 28 6.0
SB_27093| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19) 28 7.9
>SB_56255| Best HMM Match : Arf (HMM E-Value=0)
Length = 181
Score = 200 bits (487), Expect = 1e-51
Identities = 93/158 (58%), Positives = 121/158 (76%), Gaps = 1/158 (0%)
Frame = +1
Query: 193 MGGLFS-YFRGLLGAREMRILILGLDGAGKTTILYKLQVGEVVTTIPTIGFNVEQVTYKN 369
MGG+F+ F GL G +EMRIL++GLD AGKTTILYKL++GE+VTTIPTIGFNVE V YKN
Sbjct: 1 MGGMFAKLFAGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
Query: 370 LKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLREEELANAI 549
+ F VWD+GGQ IRP WR Y+ NT +I+VVDS DR+R+G +++EL ML E+EL +A+
Sbjct: 61 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVGEAREELNRMLNEDELRDAV 120
Query: 550 LVVLANKQDMAGCLTVAEVHQALGLDALRDRTFQIFKT 663
L+V ANKQD+ + AE+ LGL +LR+R + I T
Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRNRQWYIQAT 158
>SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 196 bits (478), Expect = 1e-50
Identities = 89/149 (59%), Positives = 118/149 (79%)
Frame = +1
Query: 208 SYFRGLLGAREMRILILGLDGAGKTTILYKLQVGEVVTTIPTIGFNVEQVTYKNLKFQVW 387
S F L G ++MRIL++GLD AGKTTILYKL++GE+VTTIPTIGFNVE V YKN+ F VW
Sbjct: 7 SLFTRLFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVESVEYKNISFTVW 66
Query: 388 DLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLREEELANAILVVLAN 567
D+GGQ IRP WR Y+ NT +IYVVDS DR+R+ SK+EL ML+E+EL +A+++V+AN
Sbjct: 67 DVGGQDKIRPLWRHYFQNTQGLIYVVDSNDRERVNESKEELNKMLQEDELKDAVVLVMAN 126
Query: 568 KQDMAGCLTVAEVHQALGLDALRDRTFQI 654
KQD+ L+V+E+ + LGL ++RDR + I
Sbjct: 127 KQDLPNALSVSEITEKLGLQSIRDRQWYI 155
>SB_11310| Best HMM Match : Arf (HMM E-Value=0)
Length = 255
Score = 179 bits (435), Expect = 2e-45
Identities = 89/160 (55%), Positives = 113/160 (70%), Gaps = 1/160 (0%)
Frame = +1
Query: 187 NKMGG-LFSYFRGLLGAREMRILILGLDGAGKTTILYKLQVGEVVTTIPTIGFNVEQVTY 363
+KMG + S FR LLG E+R+L++GLD AGKTTILY L++ E V TIPTIGFNVE V Y
Sbjct: 72 SKMGNSVLSLFRRLLGKDELRLLMVGLDAAGKTTILYHLKLDEPVNTIPTIGFNVEVVEY 131
Query: 364 KNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLREEELAN 543
KN+KF VWD+GGQ IR WR Y+ T +I+VVDS DRDRI +K+EL +L+EEEL
Sbjct: 132 KNIKFTVWDIGGQDKIRLLWRLYFQETQGLIFVVDSNDRDRIQEAKEELFKLLKEEELKR 191
Query: 544 AILVVLANKQDMAGCLTVAEVHQALGLDALRDRTFQIFKT 663
A L+VLANKQD+ ++ E+ + L L LR R + I T
Sbjct: 192 AALLVLANKQDLPDSMSTTELSEKLSLHTLRSRNWYIQAT 231
>SB_53421| Best HMM Match : Arf (HMM E-Value=0)
Length = 625
Score = 162 bits (394), Expect = 2e-40
Identities = 74/130 (56%), Positives = 98/130 (75%)
Frame = +1
Query: 253 ILGLDGAGKTTILYKLQVGEVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCY 432
++GLD AGKTTILY+L++ EVV+T+PT+GFNVE VTYKN+ F VWD+GGQ IR WR Y
Sbjct: 1 MIGLDNAGKTTILYRLKLEEVVSTVPTLGFNVETVTYKNISFTVWDIGGQDKIRALWRVY 60
Query: 433 YGNTDAIIYVVDSADRDRIGISKDELVHMLREEELANAILVVLANKQDMAGCLTVAEVHQ 612
Y II+VVDSADR+R +++EL +L EEEL IL+V+ANKQDMA +T +E+ +
Sbjct: 61 YQGCQGIIFVVDSADRERAEEARNELHKLLAEEELQQVILLVIANKQDMANAMTASEIRE 120
Query: 613 ALGLDALRDR 642
L L+ +R R
Sbjct: 121 KLKLNEIRGR 130
>SB_37042| Best HMM Match : Arf (HMM E-Value=0)
Length = 188
Score = 140 bits (340), Expect = 7e-34
Identities = 73/149 (48%), Positives = 104/149 (69%), Gaps = 1/149 (0%)
Frame = +1
Query: 181 LINKMGGLFSYFRGLLGAREMRILILGLDGAGKTTILYKLQVGEVVTTIPTIGFNVEQVT 360
L++K+ LFS F G R++RI++LGLD AGKTTILYKL++ E V+TIPTIGFNVE +
Sbjct: 4 LLSKVITLFSEF----GNRQVRIVMLGLDAAGKTTILYKLKLKETVSTIPTIGFNVETLQ 59
Query: 361 -YKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLREEEL 537
KN+ +WD+GGQ IRP WR Y+ T+ +++VVDS+D R+ +K+EL +L +E
Sbjct: 60 PTKNVTLTIWDVGGQDKIRPLWRHYFQGTEGLLFVVDSSDVLRMPEAKEELHGVLDSDEF 119
Query: 538 ANAILVVLANKQDMAGCLTVAEVHQALGL 624
+ +VV+ANKQD+ L E+ + LGL
Sbjct: 120 RDVPVVVVANKQDLPNALKAGEMAKHLGL 148
>SB_32972| Best HMM Match : Arf (HMM E-Value=2.66247e-44)
Length = 257
Score = 140 bits (340), Expect = 7e-34
Identities = 65/92 (70%), Positives = 75/92 (81%)
Frame = +1
Query: 397 GQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLREEELANAILVVLANKQD 576
GQTSIRPYWRCYY NTDA+IYVVDS D+DRIGISK EL+ ML E+EL AIL+V ANKQD
Sbjct: 155 GQTSIRPYWRCYYANTDAVIYVVDSVDKDRIGISKQELLAMLEEDELKKAILIVFANKQD 214
Query: 577 MAGCLTVAEVHQALGLDALRDRTFQIFKTSXV 672
M G ++ +EV ALGL AL+ RT+ IFKTS V
Sbjct: 215 MEGAMSSSEVSNALGLSALKSRTWAIFKTSAV 246
>SB_18358| Best HMM Match : Arf (HMM E-Value=0)
Length = 214
Score = 122 bits (294), Expect = 3e-28
Identities = 60/148 (40%), Positives = 90/148 (60%), Gaps = 2/148 (1%)
Frame = +1
Query: 205 FSYFRGLLGA-REMRILILGLDGAGKTTILYKLQVGEVVTTIPTIGFNVEQVT-YKNLKF 378
F FR +L R +++LGLD +GKT+ILY+ + E V T+PT FNVE + +K ++F
Sbjct: 9 FRRFRPMLKLKRPFHVVMLGLDKSGKTSILYRNKFREYVNTVPTTAFNVETIRPFKGIRF 68
Query: 379 QVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLREEELANAILVV 558
+VWD+GG+ RP W+ Y TDA+IYVVDS ++ ++DEL ++L +L A +++
Sbjct: 69 KVWDIGGREQNRPLWKAYARQTDAVIYVVDSTSAGKLEEARDELFNLLNSAQLNGAPILI 128
Query: 559 LANKQDMAGCLTVAEVHQALGLDALRDR 642
ANKQD + E+ L L L R
Sbjct: 129 FANKQDCPNAIPPREITHMLSLHDLNAR 156
>SB_57342| Best HMM Match : Arf (HMM E-Value=0)
Length = 457
Score = 118 bits (283), Expect = 6e-27
Identities = 56/117 (47%), Positives = 80/117 (68%), Gaps = 1/117 (0%)
Frame = +1
Query: 277 KTTILYKLQVGEVVTTIPTIGFNVEQVT-YKNLKFQVWDLGGQTSIRPYWRCYYGNTDAI 453
KTTILYKL++ E V T+PT+ FNVE ++ KN+ F VWD+GGQ IR WR Y+ + I
Sbjct: 122 KTTILYKLKLKETVNTVPTVAFNVETISPCKNITFSVWDIGGQDKIRRLWRHYFQGAEGI 181
Query: 454 IYVVDSADRDRIGISKDELVHMLREEELANAILVVLANKQDMAGCLTVAEVHQALGL 624
I+VVDSAD++RI ++EL +L+ EL +VV+ANKQD+ G + ++ + L L
Sbjct: 182 IFVVDSADKERIFEVREELTRVLQHSELNGVPVVVVANKQDLLGAIGPDKMAEELSL 238
>SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31)
Length = 650
Score = 115 bits (276), Expect = 4e-26
Identities = 56/116 (48%), Positives = 73/116 (62%), Gaps = 1/116 (0%)
Frame = +1
Query: 229 GAREMRILILGLDGAGKTTILYKLQVGEVVTTI-PTIGFNVEQVTYKNLKFQVWDLGGQT 405
G E R L DG+ ++ Q + + P GFNVE V YKN+ F VWD+GGQ
Sbjct: 462 GQTEQRFFALAQDGSRRSRYKGSRQKTHIQAMVSPVQGFNVETVEYKNISFTVWDVGGQD 521
Query: 406 SIRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLREEELANAILVVLANKQ 573
IRP WR Y+ NT +I+VVDS DR+R G +K+EL ML E+EL +A+L+V ANKQ
Sbjct: 522 KIRPLWRHYFQNTQGLIFVVDSNDRERAGEAKEELSRMLAEDELRDAVLLVFANKQ 577
>SB_51371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1325
Score = 113 bits (272), Expect = 1e-25
Identities = 68/155 (43%), Positives = 87/155 (56%), Gaps = 3/155 (1%)
Frame = +1
Query: 199 GLFSYFRGLLGA--REMRILILGLDGAGKTTILYKLQVGEVVTTIPTIGFNVEQVTYK-N 369
GL S R L REMRIL+LGLD +GKTTIL L +V+ PT GFN++ V K
Sbjct: 2 GLLSLLRKLKSEKDREMRILLLGLDNSGKTTILKSLASEDVLHITPTQGFNIKSVQSKGG 61
Query: 370 LKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLREEELANAI 549
+ VWD+GGQ IRPYW+ Y+ NTD + EL +L EE+L
Sbjct: 62 FRLNVWDIGGQRKIRPYWKNYFENTDIL-----------------ELDELLEEEKLIGVP 104
Query: 550 LVVLANKQDMAGCLTVAEVHQALGLDALRDRTFQI 654
L+V ANKQD+ T AE+ LGL+ +R R +QI
Sbjct: 105 LLVFANKQDLMNAATPAEISSNLGLNTIRSRGWQI 139
>SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36)
Length = 260
Score = 113 bits (271), Expect = 2e-25
Identities = 54/156 (34%), Positives = 92/156 (58%), Gaps = 1/156 (0%)
Frame = +1
Query: 202 LFSYFRGLLGAREMRILILGLDGAGKTTILYKLQVGEVVTT-IPTIGFNVEQVTYKNLKF 378
+ +F+ L EM + ++GL +GKTT + + G+ IPT+GFN+ +V+ N+
Sbjct: 8 ILDWFKSLFWKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVSKGNVTI 67
Query: 379 QVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLREEELANAILVV 558
+VWD+GGQ R W Y + I+Y+VD+AD D++ SK+EL ++L + +LA ++V
Sbjct: 68 KVWDIGGQPRFRSMWERYCRGVNCIVYMVDAADHDKLEASKNELHNLLEKPQLAGIPILV 127
Query: 559 LANKQDMAGCLTVAEVHQALGLDALRDRTFQIFKTS 666
L NK+D+ L E+ + L L +++DR + S
Sbjct: 128 LGNKKDLPNSLDEKELVERLNLTSVQDREICCYSIS 163
>SB_55155| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 487
Score = 100 bits (239), Expect = 1e-21
Identities = 50/133 (37%), Positives = 77/133 (57%), Gaps = 3/133 (2%)
Frame = +1
Query: 238 EMRILILGLDGAGKTTILYKLQVGEVV---TTIPTIGFNVEQVTYKNLKFQVWDLGGQTS 408
E RIL+LGLDG+GK+ L L G+ +T T GFNV +T L +W++GG
Sbjct: 166 EKRILVLGLDGSGKSVFLSALSQGDSSKRPSTTKTEGFNVVCLTTDGLNLNIWEIGGDEK 225
Query: 409 IRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLREEELANAILVVLANKQDMAGC 588
R YW + +T ++YVVDS+D DR S+D L +L L ++++A+KQD+ G
Sbjct: 226 YRAYWPNFIADTQLLVYVVDSSDPDRFNESRDNLKSLLSNSLLNGVPVLLVASKQDLPGA 285
Query: 589 LTVAEVHQALGLD 627
++E+ LG++
Sbjct: 286 RQLSEIVSVLGIN 298
>SB_7588| Best HMM Match : DcpS (HMM E-Value=0)
Length = 446
Score = 72.1 bits (169), Expect = 4e-13
Identities = 29/64 (45%), Positives = 45/64 (70%)
Frame = +1
Query: 388 DLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLREEELANAILVVLAN 567
D+GGQ IRP WR Y+ + +I+VVD ADRDRI ++ EL ++ + E+ + I+++ AN
Sbjct: 143 DVGGQDKIRPLWRHYFAGSQGLIFVVDCADRDRIDEARKELQRIINDREMKDVIILIFAN 202
Query: 568 KQDM 579
KQD+
Sbjct: 203 KQDL 206
>SB_214| Best HMM Match : Arf (HMM E-Value=0)
Length = 148
Score = 70.9 bits (166), Expect = 9e-13
Identities = 31/100 (31%), Positives = 59/100 (59%)
Frame = +1
Query: 325 IPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKD 504
+PT+ E+++ ++F +DLGG R W+ Y+ + I++++D AD +R+ SK
Sbjct: 5 VPTLHPTSEELSMGGMRFTTFDLGGHRQARRIWKDYFPAVNGIVFIIDCADFERLAESKK 64
Query: 505 ELVHMLREEELANAILVVLANKQDMAGCLTVAEVHQALGL 624
EL +L +E+L++ +++L NK D+ G + + Q GL
Sbjct: 65 ELDSLLADEQLSSCPVLILGNKIDIPGAVGEDYIRQNFGL 104
>SB_2235| Best HMM Match : Arf (HMM E-Value=3.1e-13)
Length = 334
Score = 65.7 bits (153), Expect = 3e-11
Identities = 33/91 (36%), Positives = 59/91 (64%)
Frame = +1
Query: 364 KNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLREEELAN 543
KN+ F VWD+GGQ ++R ++ + + +IYVVDS D R+ ++ +L+ +L+E+ + +
Sbjct: 16 KNVHFAVWDIGGQPNLRKHY--FTDDKSGLIYVVDSTDIQRL--NEAQLLGILQEKVMVD 71
Query: 544 AILVVLANKQDMAGCLTVAEVHQALGLDALR 636
+VV+ANKQD+ L ++ + LGL L+
Sbjct: 72 VPVVVVANKQDLPNVLKAGDIAEHLGLLKLK 102
>SB_6793| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 64.5 bits (150), Expect = 7e-11
Identities = 28/53 (52%), Positives = 38/53 (71%)
Frame = +1
Query: 373 KFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLREE 531
K +WD+GGQ S+R YWR Y+ +TD +I+VVDSAD+ R+ K EL +L EE
Sbjct: 3 KLNIWDVGGQRSLRSYWRNYFESTDGLIWVVDSADQRRLADCKMELQGLLVEE 55
>SB_31701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 57.6 bits (133), Expect = 9e-09
Identities = 47/141 (33%), Positives = 67/141 (47%), Gaps = 8/141 (5%)
Frame = +1
Query: 178 KLINKMGGLFSYFRGLLGAREMRILILGLDGAGKTTIL--YKLQVGEVVTTIP------T 333
++ + GL+ Y L E ILILGLD AGKTT+L K + + IP T
Sbjct: 4 EMFTLLSGLWKY---LFQKDEYFILILGLDNAGKTTLLEQIKRKFCKTYNGIPFEKITTT 60
Query: 334 IGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELV 513
+G N+ ++T ++K WDLGGQ +R W D + + R ++ L
Sbjct: 61 VGLNIGKITISHVKLMFWDLGGQQELRTLW-------DKVEVMSVKILMTRFLPVEEALT 113
Query: 514 HMLREEELANAILVVLANKQD 576
H + L L+VLANKQD
Sbjct: 114 H----KALEGVPLLVLANKQD 130
>SB_15207| Best HMM Match : Arf (HMM E-Value=1.9e-05)
Length = 259
Score = 56.8 bits (131), Expect = 1e-08
Identities = 23/50 (46%), Positives = 33/50 (66%)
Frame = +1
Query: 295 KLQVGEVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNT 444
K+++ V + GFNVE V +++LKF +WD+GG +RP WR YY NT
Sbjct: 208 KMEMRAVALGLDGAGFNVETVEHRSLKFTIWDVGGLQKLRPLWRHYYLNT 257
>SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 54.4 bits (125), Expect = 8e-08
Identities = 35/132 (26%), Positives = 57/132 (43%), Gaps = 5/132 (3%)
Frame = +1
Query: 244 RILILGLDGAGKTTILYKLQVGEVV-----TTIPTIGFNVEQVTYKNLKFQVWDLGGQTS 408
++L++G G GKT+++ + G T +G V + +K Q WD GQ
Sbjct: 13 KVLVVGDPGVGKTSLIRRFTKGYFCDNSSSTVGVDVGTRVLDIHGDRVKLQCWDTAGQEK 72
Query: 409 IRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLREEELANAILVVLANKQDMAGC 588
R + YY N DA+I V D +R L+++ + N + V++ NK D+ G
Sbjct: 73 FRGITQSYYRNADAVILVFDITNRGTFASIPQWLMNVQKYTN-KNILKVLVGNKTDLKGA 131
Query: 589 LTVAEVHQALGL 624
A L
Sbjct: 132 SRKVNTRSAANL 143
>SB_4971| Best HMM Match : Ras (HMM E-Value=0)
Length = 209
Score = 48.8 bits (111), Expect = 4e-06
Identities = 31/123 (25%), Positives = 56/123 (45%), Gaps = 5/123 (4%)
Frame = +1
Query: 244 RILILGLDGAGKTTILYKLQVGEVVTT-IPTIG--FNVEQVTY--KNLKFQVWDLGGQTS 408
++L++G G GK+++L + T I TIG F + +T K +K Q+WD GQ
Sbjct: 10 KLLLIGDSGVGKSSLLLRFADDTFSNTYISTIGVDFKIRTLTVDGKTIKLQIWDTAGQER 69
Query: 409 IRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLREEELANAILVVLANKQDMAGC 588
R YY + I+ + D + + + + + + E +++ NK D+ C
Sbjct: 70 FRTLTTAYYRSAHGIVLIYDVNESETF-LHLSQWLEEVSEYACEGVNTILVGNKCDLIDC 128
Query: 589 LTV 597
V
Sbjct: 129 RQV 131
>SB_27557| Best HMM Match : Ras (HMM E-Value=0)
Length = 184
Score = 48.4 bits (110), Expect = 5e-06
Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 6/119 (5%)
Frame = +1
Query: 238 EMRILILGLDGAGKTTILYKLQVGEVV-TTIPTIG--FNVEQVTYKN---LKFQVWDLGG 399
+ RI+++G GK+++L + G+ + PT+G F+V + K +K Q+WD G
Sbjct: 13 QFRIILIGDSTVGKSSLLRQFTEGQFFENSDPTVGVDFHVRVLELKGDVRIKLQIWDTAG 72
Query: 400 QTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLREEELANAILVVLANKQD 576
Q R YY NT + + D +RD D + E A + +++ +K D
Sbjct: 73 QERFRSITYSYYRNTVGCLIIYDITNRDSFVNVMDWYKEAKQCVEEAEVVFMLVGHKID 131
>SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 46.0 bits (104), Expect = 3e-05
Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Frame = +1
Query: 232 AREMRILILGLDGAGKTTILYKLQVGEV-VTTIPTIGFNV-EQVTYKN---LKFQVWDLG 396
A+ +I+I+G GKT + Y+L G+ T TIG + E+ N +K Q+WD
Sbjct: 44 AKTFKIIIIGDSNVGKTCLAYRLCTGKFPERTETTIGVDFWEKSLELNGEFVKLQLWDTA 103
Query: 397 GQTSIRPYWRC-YYGNTDAIIYVVD 468
GQ R C YY N +A++++ D
Sbjct: 104 GQERFRKSMVCHYYRNVNAVVFMYD 128
>SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 44.4 bits (100), Expect = 8e-05
Identities = 29/118 (24%), Positives = 54/118 (45%), Gaps = 5/118 (4%)
Frame = +1
Query: 244 RILILGLDGAGKTTILYKLQVGEVVTTI-PTIG--FNVEQVTY--KNLKFQVWDLGGQTS 408
+I+++G GKT ++ + G PTIG F ++ V + +K Q+WD GQ
Sbjct: 9 KIILVGDANVGKTCLVRQFTKGYFPPNQGPTIGVDFTIKTVDVDGEKVKLQIWDTAGQER 68
Query: 409 IRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLREEELANAILVVLANKQDMA 582
R + YY N D +I D ++ S + + + ++ ++ NK D++
Sbjct: 69 FRSITQSYYHNADGVIVTYDITNKKSFE-SLPQWLDDTNRYTSKDVLIAIVGNKSDLS 125
>SB_977| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 765
Score = 44.4 bits (100), Expect = 8e-05
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Frame = +1
Query: 319 TTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYW-RCYYGNTDAIIYVVDSADRDRIGI 495
T + T G T+K+L F+++D+GGQ S R W C+ G T AII+ V + D +
Sbjct: 177 TRVKTTGIVETHFTFKDLHFKMFDVGGQRSERKKWIHCFEGVT-AIIFCVALSAYDLVLA 235
Query: 496 SKDELVHMLREEELANAI 549
+E+ M+ +L ++I
Sbjct: 236 EDEEMNRMMESMKLFDSI 253
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/54 (31%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Frame = +1
Query: 220 GLLGAREMRILILGLDGAGKTTILYKLQVGEVVTTIPTIGFNVEQVT-YKNLKF 378
G ARE+++L+LG +GK+TI+ ++++ I G++ E+ T YK + +
Sbjct: 27 GERAAREVKLLLLGAGESGKSTIVKQMKI------IHEHGYSTEECTQYKQVVY 74
>SB_50855| Best HMM Match : Ras (HMM E-Value=0)
Length = 733
Score = 44.4 bits (100), Expect = 8e-05
Identities = 31/120 (25%), Positives = 56/120 (46%), Gaps = 5/120 (4%)
Frame = +1
Query: 238 EMRILILGLDGAGKTTILYKLQVGEVVT-TIPTIG--FNVEQVTYKN--LKFQVWDLGGQ 402
+ ++++LG GK++++ + G+ TIG F + V + +KF++WD GQ
Sbjct: 21 QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQ 80
Query: 403 TSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLREEELANAILVVLANKQDMA 582
YY A I V D ++D +K V L+ + N ++ + NK D+A
Sbjct: 81 ERYHSLAPMYYRGAQAAIVVYDITNQDTFARAK-TWVKELQRQASPNIVIALSGNKADLA 139
>SB_16166| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/53 (39%), Positives = 35/53 (66%)
Frame = +1
Query: 496 SKDELVHMLREEELANAILVVLANKQDMAGCLTVAEVHQALGLDALRDRTFQI 654
+K +LV ++ EL A L++LANKQD+ G ++VAE+ + L L ++D + I
Sbjct: 35 NKFQLVAIIAICELKQAALLILANKQDIKGSMSVAEISEQLNLACIKDHGWHI 87
>SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 43.2 bits (97), Expect = 2e-04
Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 5/104 (4%)
Frame = +1
Query: 241 MRILILGLDGAGKTTILYKLQVGEVVTTI-PTIG--FNVEQVTYKN--LKFQVWDLGGQT 405
++ILI+G G GK+++L + I TIG F V+ +T + K +WD GQ
Sbjct: 9 LKILIVGESGVGKSSLLLRFTDDTFDPDIGATIGVDFKVKTLTVEGNKAKLAIWDTAGQE 68
Query: 406 SIRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLREEEL 537
R YY +I V D+ R+ D+L L E E+
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDTNSRETF----DKLEEWLNEVEM 108
>SB_8302| Best HMM Match : G-alpha (HMM E-Value=0)
Length = 315
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/70 (34%), Positives = 37/70 (52%)
Frame = +1
Query: 319 TTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGIS 498
T + T G Q YK L F+++D+GGQ S R W + + AIIY V + D + +
Sbjct: 178 TRVKTTGIVEVQFDYKRLHFKLFDVGGQRSERKKWIHCFEDVTAIIYCVALSAYD-LSLE 236
Query: 499 KDELVHMLRE 528
+DE + + E
Sbjct: 237 EDESTNRMEE 246
>SB_49453| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1117
Score = 42.3 bits (95), Expect = 3e-04
Identities = 24/70 (34%), Positives = 37/70 (52%)
Frame = +1
Query: 319 TTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGIS 498
T + T G Q YK L F+++D+GGQ S R W + + AIIY V + D + +
Sbjct: 226 TRVKTTGIVEVQFDYKRLHFKLFDVGGQRSERKKWIHCFEDVTAIIYCVALSAYD-LTLE 284
Query: 499 KDELVHMLRE 528
+DE + + E
Sbjct: 285 EDESTNRMEE 294
>SB_10811| Best HMM Match : Ras (HMM E-Value=0)
Length = 304
Score = 41.9 bits (94), Expect = 5e-04
Identities = 22/81 (27%), Positives = 37/81 (45%)
Frame = +1
Query: 337 GFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVH 516
G + V K++K Q+WD GQ R R YY + V D + R+ + L
Sbjct: 133 GSKIVNVGGKSVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDISSRETFNSLTNWLTD 192
Query: 517 MLREEELANAILVVLANKQDM 579
R N +++++ NK+D+
Sbjct: 193 -ARTLASPNIVIILVGNKKDL 212
>SB_13045| Best HMM Match : Ras (HMM E-Value=0)
Length = 629
Score = 41.5 bits (93), Expect = 6e-04
Identities = 33/124 (26%), Positives = 55/124 (44%), Gaps = 5/124 (4%)
Frame = +1
Query: 244 RILILGLDGAGKTTILYKLQVGEV-VTTIPTIGFNVE----QVTYKNLKFQVWDLGGQTS 408
+I+++G G GK+++L + E + + TIG QV K +K QVWD GQ
Sbjct: 14 KIVLIGDSGVGKSSLLSRFTRNEFDIESKSTIGVEFATRSIQVEGKIIKAQVWDTAGQER 73
Query: 409 IRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLREEELANAILVVLANKQDMAGC 588
R YY + V D + + L+ +RE +++++ NK D+
Sbjct: 74 YRAITSAYYRGAVGAVLVYDLTKQKTFQDVERWLLE-VREHADPTIVVMLVGNKCDLKHL 132
Query: 589 LTVA 600
VA
Sbjct: 133 RAVA 136
>SB_44625| Best HMM Match : Ras (HMM E-Value=0)
Length = 128
Score = 41.1 bits (92), Expect = 8e-04
Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Frame = +1
Query: 307 GEVVTTIPTIGFNVEQVTY--KNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADR 480
G +TTI + F + + + +K Q+WD GQ R YY T +I V D
Sbjct: 4 GSYITTIG-VDFKIRTINIDGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSA 62
Query: 481 DRIGISKDELVHMLREEELANAILVVLANKQD 576
D ++ +H + ++ + I +++ NK D
Sbjct: 63 DTF-VNVKRWLHEI-DQNCDDVIRILVGNKDD 92
>SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44)
Length = 212
Score = 40.3 bits (90), Expect = 0.001
Identities = 34/128 (26%), Positives = 58/128 (45%), Gaps = 7/128 (5%)
Frame = +1
Query: 244 RILILGLDGAGKTTILYKLQVGEVVT-TIPTIGFN----VEQVTYKNLKFQVWDLGGQTS 408
++++LG G GKT++ Y+L+ TIG + ++ K + VWD G
Sbjct: 13 KVVLLGEAGVGKTSLFYRLKENHFTPGRRNTIGIDSCSKFVKIGEKQVTLSVWDTAGVER 72
Query: 409 IRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLR--EEELANAILVVLANKQDMA 582
R + YY A I + + D S L+H + +E +A+ V++ANK D+
Sbjct: 73 FRTVTKNYYRGAHACILMFNVDDPG----SLQYLLHWIHDTDEFCPDALKVLVANKIDLD 128
Query: 583 GCLTVAEV 606
+T V
Sbjct: 129 EQVTTESV 136
>SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21)
Length = 115
Score = 40.3 bits (90), Expect = 0.001
Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 5/92 (5%)
Frame = +1
Query: 244 RILILGLDGAGKTTILYKLQVGEVVTT-IPTIG--FNVEQV--TYKNLKFQVWDLGGQTS 408
++LI+G GKT+ L++ + + T+G F V+ V K +K Q+WD GQ
Sbjct: 23 KLLIIGNSAVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRNDKRVKLQIWDTAGQER 82
Query: 409 IRPYWRCYYGNTDAIIYVVDSADRDRIGISKD 504
R YY I + D + + +D
Sbjct: 83 YRTITTAYYRGAMGFILMYDITNEESFQAVQD 114
>SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2229
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/89 (24%), Positives = 40/89 (44%), Gaps = 7/89 (7%)
Frame = +1
Query: 217 RGLLGAREMRILILGLDGAGKTTILYKLQVGEVV-TTIPTIGFNVEQVTYKN------LK 375
R G M+++++G + GKTT++++L + T G ++E+ K
Sbjct: 544 RSARGYYSMKLMLVGREAQGKTTLMHRLMLDNTYFINSATNGISMEEFRLKKDFLHREFI 603
Query: 376 FQVWDLGGQTSIRPYWRCYYGNTDAIIYV 462
F++WD GGQ +C+ I V
Sbjct: 604 FKIWDFGGQEDYYATHQCFISTLSLYILV 632
>SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 38.3 bits (85), Expect = 0.006
Identities = 30/90 (33%), Positives = 39/90 (43%), Gaps = 5/90 (5%)
Frame = +1
Query: 325 IPTIG--FNVEQVTY--KNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIG 492
I TIG F + + K +K Q+WD GQ R YY II V D D++
Sbjct: 59 ISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFN 118
Query: 493 ISKDELVHMLREE-ELANAILVVLANKQDM 579
K L + R E N +LV NK D+
Sbjct: 119 NVKQWLQEIDRYACENVNKLLV--GNKCDL 146
>SB_38597| Best HMM Match : Arf (HMM E-Value=0.15)
Length = 188
Score = 30.7 bits (66), Expect(2) = 0.006
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +1
Query: 553 VVLANKQDMAGCLTVAEVHQALGLDAL 633
V LANKQD+ G + EV+Q+L L AL
Sbjct: 28 VRLANKQDLEGAMNDDEVYQSLDLGAL 54
Score = 26.6 bits (56), Expect(2) = 0.006
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +1
Query: 382 VWDLGGQTSIRPYWRCYY 435
V+DLGG IR W+ YY
Sbjct: 8 VYDLGGGAKIRGIWKDYY 25
>SB_47462| Best HMM Match : Ras (HMM E-Value=0)
Length = 385
Score = 35.5 bits (78), Expect = 0.039
Identities = 27/119 (22%), Positives = 49/119 (41%), Gaps = 4/119 (3%)
Frame = +1
Query: 235 REMRILILGLDGAGKTTILYKLQVGEVVTTI-PTI-GFNVEQVTYKNLK--FQVWDLGGQ 402
+E ++++LG G GK+ + + G+ V PTI F +++ N ++ D G
Sbjct: 2 KEYKVVVLGSGGVGKSALTVQFVTGQFVEKYDPTIEDFYRKEIEVDNNPSILEILDTAGT 61
Query: 403 TSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLREEELANAILVVLANKQDM 579
Y N + V +R K +LR + N +V++ NK D+
Sbjct: 62 EQFASMRDLYIKNGQGFLLVYSLINRQTFADLKPMRAQILRVKGSENVPIVLVGNKSDI 120
>SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34)
Length = 241
Score = 35.5 bits (78), Expect = 0.039
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = +1
Query: 364 KNLKFQVWDLGGQTSIRPYWRCYYGNTDAII--YVVDSADRDRIGISKDELVHMLREEEL 537
+++K Q+WD GQ R + YY + + +I Y + D + I E V E
Sbjct: 93 QDVKLQIWDTAGQERFRTITQSYYRSCNGVIIAYDITKCDTFKNVIRWGEDVQKYAPE-- 150
Query: 538 ANAILVVLANKQDM 579
NAI +++ NK+D+
Sbjct: 151 -NAIKLLVGNKKDL 163
>SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 244
Score = 35.5 bits (78), Expect = 0.039
Identities = 24/96 (25%), Positives = 44/96 (45%), Gaps = 10/96 (10%)
Frame = +1
Query: 223 LLGAREMRILILGLDGAGKTTILYKLQVGEVVTTIP-TIGFNVEQVTY---------KNL 372
+ ++RI ++G G GKT++++ + E +++ TIG VE Y K
Sbjct: 1 MAAVEKVRIAVVGDSGVGKTSLVHLICHEESISSAAWTIGCTVEVKLYDYKEGMPGGKTF 60
Query: 373 KFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADR 480
+ WD+GG + +Y + +I V D +R
Sbjct: 61 FLEFWDIGGSANHENSRSIFYNGINGLILVHDLTNR 96
>SB_54971| Best HMM Match : Ras (HMM E-Value=0)
Length = 239
Score = 33.9 bits (74), Expect = 0.12
Identities = 32/115 (27%), Positives = 44/115 (38%), Gaps = 5/115 (4%)
Frame = +1
Query: 250 LILGLDGAGKTTILYKLQVGEVVTT-IPTIGFNVEQVTYKN----LKFQVWDLGGQTSIR 414
L +G G GKTT + + GE I T+G V + + +KF VWD GQ
Sbjct: 36 LQVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLIFFTSRGPIKFNVWDTAGQEKFG 95
Query: 415 PYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLREEELANAILVVLANKQDM 579
YY I + D R+ H E N +V+ NK D+
Sbjct: 96 GLRDGYYIQGQCAIIMFDVT--SRVTYKNVPNWHRDLERVCENIPIVLCGNKVDI 148
>SB_9680| Best HMM Match : Ank (HMM E-Value=4e-20)
Length = 1243
Score = 32.3 bits (70), Expect = 0.37
Identities = 12/38 (31%), Positives = 26/38 (68%)
Frame = +1
Query: 241 MRILILGLDGAGKTTILYKLQVGEVVTTIPTIGFNVEQ 354
M+++++G+ G GKTT+L L+ + + + T+G V++
Sbjct: 667 MKLMVVGIQGYGKTTLLAALKGQPLPSNLSTVGIVVDE 704
>SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10)
Length = 159
Score = 32.3 bits (70), Expect = 0.37
Identities = 28/119 (23%), Positives = 50/119 (42%), Gaps = 7/119 (5%)
Frame = +1
Query: 244 RILILGLDGAGKTTILYKLQVGEVVTTIPTIGFNVEQ-------VTYKNLKFQVWDLGGQ 402
+I + G G GKT+I +L E ++ +++Q + K LK +WD G
Sbjct: 10 KIALCGKMGVGKTSIYTRLSTDEFPEEEQSL-HHIDQCFIPLVCICNKKLKIHLWDTLGM 68
Query: 403 TSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLREEELANAILVVLANKQDM 579
R +Y N+ ++ V D + K+ + A +V++ANK D+
Sbjct: 69 EEYESLTRNHYSNSKVVLVVYSLDLPDSLAQVKE--CTQSAQVNAPAAKIVLVANKMDL 125
>SB_49432| Best HMM Match : Ras (HMM E-Value=1.4e-12)
Length = 460
Score = 31.9 bits (69), Expect = 0.48
Identities = 15/64 (23%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Frame = +1
Query: 235 REMRILILGLDGAGKTTI----LYKLQVGEVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQ 402
+ +R+++LG DG GK+ + L + +GE T+ + ++ Q+ +++ + D G+
Sbjct: 15 KPVRVVVLGKDGVGKSALTVRFLTRRFIGEYDQTLESTHRHILQIDNEDVSLDISDTAGE 74
Query: 403 TSIR 414
+R
Sbjct: 75 VRVR 78
>SB_45581| Best HMM Match : Ras (HMM E-Value=0.069)
Length = 284
Score = 31.9 bits (69), Expect = 0.48
Identities = 40/134 (29%), Positives = 62/134 (46%), Gaps = 7/134 (5%)
Frame = +1
Query: 235 REMRILILGLDGAGKTT----ILYKLQVGEVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQ 402
R +R+++LG DG GK+ +L K +GE +T+ +GF + + LK + L Q
Sbjct: 15 RSLRVVVLGQDGVGKSALTVRLLTKRFIGEYDSTLGEMGFYINTM----LKIREPQLISQ 70
Query: 403 TSIRPYWRCYYGNTDAIIYVVDSADR-DRIGISKDELVHMLREEELANAILVVLANKQDM 579
+ C TD +Y+ + D R G KD VH LR + L Q +
Sbjct: 71 S-------C----TDGYVYLRTAKDTYGRPGTPKDCKVH-LRTAKDTIGRLDTPKYGQVL 118
Query: 580 AGC--LTVAEVHQA 615
+GC +EVH+A
Sbjct: 119 SGCGVFDGSEVHEA 132
>SB_48632| Best HMM Match : DUF265 (HMM E-Value=7.6e-22)
Length = 455
Score = 31.5 bits (68), Expect = 0.64
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 226 LGAREMRILILGLDGAGKTTILYKLQVGEVVTTIPTIGFNVEQV 357
+ A + +L+ G G GKTT+ K++ +PT GF E++
Sbjct: 47 MAAYKKHVLLTGPPGIGKTTLCSKVKQALASRGVPTQGFYTEEI 90
>SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6116
Score = 30.7 bits (66), Expect = 1.1
Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 8/92 (8%)
Frame = +1
Query: 226 LGAREMRILILGLDGAGKTTILY---KLQVGEVVTTIPTIGFNVE---QVTYKNLKFQVW 387
+ A +++I+G GKT +L K Q EV +PT+ N +V K ++ +W
Sbjct: 5925 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVY--VPTVFENYVADIEVDGKQVELALW 5982
Query: 388 DLGGQTSIRPYWRCYYGNTDAII--YVVDSAD 477
D GQ Y +TD I+ + +DS D
Sbjct: 5983 DTAGQEDYDRLRPLSYPDTDVILMCFSIDSPD 6014
>SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 7/85 (8%)
Frame = +1
Query: 235 REMRILILGLDGAGKTTILYKLQVGEVVTTI--PTIGFNVEQVTYK-----NLKFQVWDL 393
R ++L++G GK + + K V + + PTIG + T + ++ Q+W +
Sbjct: 17 RNFKVLVVGDILTGKQSFV-KRYVNNIWHPLYKPTIGVDFALKTIQWAQNTTIRLQIWLI 75
Query: 394 GGQTSIRPYWRCYYGNTDAIIYVVD 468
GQ R YY DA + + D
Sbjct: 76 AGQERFSSMTRVYYKGADACVVLFD 100
>SB_21165| Best HMM Match : LRR_1 (HMM E-Value=6.5e-13)
Length = 1383
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/65 (27%), Positives = 39/65 (60%), Gaps = 8/65 (12%)
Frame = +1
Query: 235 REMRILILGLDGAGKTTIL------YKLQVGEVVTTIP-TIGFNVEQVTY-KNLKFQVWD 390
+++++ I+G +GAGKTT++ Y ++ V+ + T G + + ++L+ +V+D
Sbjct: 566 KQVKVTIVGGEGAGKTTLVKALGFKYNWKLSTVMDSEERTKGLEISNIDLNESLRMKVFD 625
Query: 391 LGGQT 405
LGG +
Sbjct: 626 LGGDS 630
>SB_43238| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2532
Score = 29.9 bits (64), Expect = 2.0
Identities = 21/48 (43%), Positives = 24/48 (50%)
Frame = +1
Query: 190 KMGGLFSYFRGLLGAREMRILILGLDGAGKTTILYKLQVGEVVTTIPT 333
KM GLF L A R+LI G GAGKTT+ KL +PT
Sbjct: 358 KMDGLFVVDGQLKEA--CRVLIEGESGAGKTTLCQKLAFDWAKGELPT 403
Score = 29.9 bits (64), Expect = 2.0
Identities = 21/48 (43%), Positives = 24/48 (50%)
Frame = +1
Query: 190 KMGGLFSYFRGLLGAREMRILILGLDGAGKTTILYKLQVGEVVTTIPT 333
KM GLF L A R+LI G GAGKTT+ KL +PT
Sbjct: 1760 KMDGLFVVDGQLKEA--CRVLIEGESGAGKTTLCQKLAFDWAKGELPT 1805
>SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06)
Length = 965
Score = 29.9 bits (64), Expect = 2.0
Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Frame = +1
Query: 235 REMRILILGLDGAGKTTI----LYKLQVGEVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQ 402
R ++++I+G DG GK+ + L K +GE T+ + +V + + ++ D G+
Sbjct: 860 RIVKVVIIGEDGVGKSALTVRFLTKRFIGEYDDTLESTYRQDAEVAGEVVAIELTDTAGE 919
Query: 403 TSIRPYWRCY-YGNTDAIIYVVDS 471
S RC G ++Y + S
Sbjct: 920 NSPAKLERCLEIGEVFVVLYSITS 943
>SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30)
Length = 421
Score = 29.5 bits (63), Expect = 2.6
Identities = 21/76 (27%), Positives = 29/76 (38%)
Frame = +1
Query: 355 VTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLREEE 534
V K KF +WD GQ + YY + A I V D S + L+
Sbjct: 4 VNDKAYKFNIWDTAGQERFKSLAPLYYRDAAAAILVYDITIESTFH-SLRPWIRELQRYG 62
Query: 535 LANAILVVLANKQDMA 582
+ ++ V NK D A
Sbjct: 63 PQDIVIAVAGNKCDKA 78
>SB_50523| Best HMM Match : Ras (HMM E-Value=0)
Length = 154
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/35 (34%), Positives = 15/35 (42%)
Frame = +1
Query: 364 KNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVD 468
K +K Q+WD GQ YY I+ V D
Sbjct: 3 KKIKLQIWDTAGQERFHTITTAYYRGAMGIMLVYD 37
>SB_19345| Best HMM Match : Arf (HMM E-Value=3.3e-05)
Length = 222
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +1
Query: 439 NTDAIIYVVD-SADRDRIGISKDELVHMLREEE 534
N DA IYVVD SA+ R+ I EL M+ +
Sbjct: 126 NVDAFIYVVDSSAESQRVNIGDKELQAMMNNSK 158
>SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 310
Score = 29.1 bits (62), Expect = 3.4
Identities = 32/126 (25%), Positives = 55/126 (43%), Gaps = 4/126 (3%)
Frame = +1
Query: 235 REMRILILGLDGAGKTTILYKLQVGEVVTTI-PTIGFNVEQVTYKNLKFQVWDLGGQTSI 411
R+ +++LG G GK+ +L + G + PT+ + + L +
Sbjct: 126 RDYSLVLLGQAGVGKSALLVRFCTGRFIHEYDPTLEMTYD--VSATIDEDPATLHITDTA 183
Query: 412 RPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLRE--EELANAILVVLA-NKQDMA 582
Y Y + I VV S + R + +LV ++RE ++ A L+VLA NK D+
Sbjct: 184 STYEPVYLSQNEGFI-VVYSINELRTFETAKQLVKLIREIKKQKALTTLIVLAGNKCDLK 242
Query: 583 GCLTVA 600
C V+
Sbjct: 243 HCRAVS 248
>SB_16779| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 81
Score = 29.1 bits (62), Expect = 3.4
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +1
Query: 235 REMRILILGLDGAGKTTILYKLQV 306
+ +R++++G DG GKT I Y L +
Sbjct: 13 KAVRVMVMGQDGVGKTDIRYTLAI 36
>SB_8315| Best HMM Match : Ras (HMM E-Value=0)
Length = 565
Score = 28.7 bits (61), Expect = 4.5
Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 16/92 (17%)
Frame = +1
Query: 241 MRILILGLDGAGKTTILYKLQVGEV-VTTIPTIG--FNVEQVTY-------------KNL 372
++ L LG G GKT++LY+ +PTIG F ++V + + +
Sbjct: 107 IKFLALGDSGVGKTSLLYQYTDSHFNPRFVPTIGIDFREKRVVHHPLNPDGERSTRGQRI 166
Query: 373 KFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVD 468
Q+WD GQ R ++ + + V D
Sbjct: 167 HLQLWDTAGQERFRSLTTAFFRDAMGFLLVFD 198
>SB_12271| Best HMM Match : DUF1079 (HMM E-Value=1.2)
Length = 1716
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +3
Query: 531 RISERDTRCFSQQTGHGRMSDSSRGTPGPGLGRL 632
R S R T + Q +GR D +RG P G GR+
Sbjct: 477 RSSSRRTSDYQQHDQNGRGVDENRGEPSYGRGRI 510
>SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42)
Length = 704
Score = 28.3 bits (60), Expect = 6.0
Identities = 29/123 (23%), Positives = 49/123 (39%), Gaps = 9/123 (7%)
Frame = +1
Query: 238 EMRILILGLDGAGKTTILYKLQ-----VGEVVTTIPTIGFNVEQVTY--KNLKFQVWDLG 396
E + LI+G G GK+ ++ KL+ + V +T+ E Y K +K + D
Sbjct: 350 EFKTLIIGNSGVGKSCLVNKLKNPHFDLKFVTSTVSMNDIFWEYFLYDNKKIKLTIGDTA 409
Query: 397 GQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLREEELA--NAILVVLANK 570
GQ Y+ + V D + + + R A N L+++ NK
Sbjct: 410 GQERYFSILPAYFRGVQGVFLVFDITVEITF-LQLHRWIDLARTTSGADSNIQLILVGNK 468
Query: 571 QDM 579
+DM
Sbjct: 469 KDM 471
>SB_10598| Best HMM Match : LRR_1 (HMM E-Value=4.4e-19)
Length = 811
Score = 28.3 bits (60), Expect = 6.0
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 7/82 (8%)
Frame = +1
Query: 178 KLINKMGGLFSYFRGL--LGAREMRILILGLDGAGKTTILYKLQVGEVVTTI---PTIGF 342
K +N + G F + + ++ +++++LG GAGKT+ + L E + T+G
Sbjct: 238 KGMNSIRGFFESMKKSRPVHSKRIKLVLLGESGAGKTSCAHGLVECEAINQTLNDGTVGV 297
Query: 343 NVE--QVTYKNLKFQVWDLGGQ 402
+ QV L+ QV D GQ
Sbjct: 298 VIRNWQVEPDGLEVQVVDCAGQ 319
>SB_27093| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 683
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/26 (50%), Positives = 21/26 (80%)
Frame = +1
Query: 238 EMRILILGLDGAGKTTILYKLQVGEV 315
E RI ++G +G+GKTT+L K+ +GE+
Sbjct: 364 ESRIAVVGDNGSGKTTLL-KILLGEL 388
>SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19)
Length = 351
Score = 27.9 bits (59), Expect = 7.9
Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 7/88 (7%)
Frame = +1
Query: 226 LGAREMRILILGLDGAGKTTILYKLQVGEVVTT-IPTIGFNVEQ-VTYK---NLKFQVWD 390
L A R+++LG G GKT+++ + G PT+G E+ VT N ++ D
Sbjct: 103 LPAAVFRVVVLGSGGVGKTSLVKRFISGTFSEQYTPTVGDLYEKSVTLSKDFNAFLEIMD 162
Query: 391 LGGQTSIRPYWRCYYGNTDA--IIYVVD 468
G + N DA ++Y VD
Sbjct: 163 TAGSYPFPAMKKLTIQNADAFVLVYSVD 190
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,743,217
Number of Sequences: 59808
Number of extensions: 427532
Number of successful extensions: 1092
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 1009
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1079
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1721264831
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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