BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_G06
(673 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127647-1|ABL74413.1| 213|Anopheles gambiae Rab5 protein. 43 1e-05
DQ182016-1|ABA56308.1| 353|Anopheles gambiae G(alpha)i protein. 42 1e-05
DQ182015-1|ABA56307.1| 353|Anopheles gambiae G(alpha)q2 protein. 36 9e-04
DQ182017-1|ABA56309.1| 383|Anopheles gambiae G(alpha)s protein. 29 0.18
AY724802-1|AAW50311.1| 134|Anopheles gambiae G protein alpha su... 28 0.31
AY724801-1|AAW50310.1| 134|Anopheles gambiae G protein alpha su... 28 0.31
AY752910-1|AAV30084.1| 250|Anopheles gambiae peroxidase 15 prot... 24 5.0
U29486-1|AAC46995.1| 695|Anopheles gambiae ATP-binding-cassette... 23 6.6
U29485-1|AAC46994.1| 695|Anopheles gambiae ATP-binding-cassette... 23 6.6
U29484-1|AAC47423.1| 673|Anopheles gambiae ATP-binding-cassette... 23 6.6
AJ438610-4|CAD27476.1| 593|Anopheles gambiae putative transcrip... 23 8.8
>EF127647-1|ABL74413.1| 213|Anopheles gambiae Rab5 protein.
Length = 213
Score = 42.7 bits (96), Expect = 1e-05
Identities = 31/125 (24%), Positives = 56/125 (44%), Gaps = 5/125 (4%)
Frame = +1
Query: 238 EMRILILGLDGAGKTTILYKLQVGEVVT-TIPTIG--FNVEQVTYKN--LKFQVWDLGGQ 402
+ ++++LG GK++++ + G+ TIG F + + + +KF++WD GQ
Sbjct: 24 QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCIDDTTVKFEIWDTAGQ 83
Query: 403 TSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLREEELANAILVVLANKQDMA 582
YY A I V D + D +K V L+ + N ++ + NK D+A
Sbjct: 84 ERYHSLAPMYYRGAQAAIVVYDIQNSDSFARAK-TWVKELQRQASPNIVIALAGNKADLA 142
Query: 583 GCLTV 597
V
Sbjct: 143 NSRVV 147
>DQ182016-1|ABA56308.1| 353|Anopheles gambiae G(alpha)i protein.
Length = 353
Score = 42.3 bits (95), Expect = 1e-05
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Frame = +1
Query: 319 TTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYW-RCYYGNTDAIIYVVDSADRDRIGI 495
T + T G ++K++ F+++D+GGQ S R W C+ G T AII+ V + D +
Sbjct: 176 TRVKTTGIVETHFSFKSIHFKMFDVGGQRSERKKWIHCFEGVT-AIIFCVALSGYDLVLA 234
Query: 496 SKDELVHMLREEELANAI 549
+E+ M+ +L ++I
Sbjct: 235 EDEEMNRMIESMKLFDSI 252
Score = 25.8 bits (54), Expect = 1.2
Identities = 10/29 (34%), Positives = 21/29 (72%)
Frame = +1
Query: 220 GLLGAREMRILILGLDGAGKTTILYKLQV 306
G A E+++L+LG +GK+TI+ ++++
Sbjct: 26 GERAASEVKLLLLGAGESGKSTIVKQMKI 54
>DQ182015-1|ABA56307.1| 353|Anopheles gambiae G(alpha)q2 protein.
Length = 353
Score = 36.3 bits (80), Expect = 9e-04
Identities = 20/76 (26%), Positives = 37/76 (48%)
Frame = +1
Query: 325 IPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKD 504
+PT G + ++F++ D+GGQ S R W + N +II++V ++ D+I +
Sbjct: 178 VPTTGIIEYPFDLEEIRFRMVDVGGQRSERRKWIHCFENVTSIIFLVALSEYDQILFESE 237
Query: 505 ELVHMLREEELANAIL 552
M + L I+
Sbjct: 238 NENRMEESKALFKTII 253
Score = 25.4 bits (53), Expect = 1.6
Identities = 8/24 (33%), Positives = 19/24 (79%)
Frame = +1
Query: 235 REMRILILGLDGAGKTTILYKLQV 306
RE+++L+LG +GK+T + ++++
Sbjct: 32 RELKLLLLGTGESGKSTFIKQMRI 55
>DQ182017-1|ABA56309.1| 383|Anopheles gambiae G(alpha)s protein.
Length = 383
Score = 28.7 bits (61), Expect = 0.18
Identities = 15/53 (28%), Positives = 28/53 (52%)
Frame = +1
Query: 370 LKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLRE 528
+ F ++D+GGQ R W + + AII+V + + + + +D + LRE
Sbjct: 206 VNFHMFDVGGQRDERRKWIQCFNDVTAIIFVTACSSYNMV-LREDPTQNRLRE 257
Score = 23.0 bits (47), Expect = 8.8
Identities = 8/21 (38%), Positives = 17/21 (80%)
Frame = +1
Query: 244 RILILGLDGAGKTTILYKLQV 306
R+L+LG +GK+TI+ ++++
Sbjct: 46 RLLLLGAGESGKSTIVKQMRI 66
>AY724802-1|AAW50311.1| 134|Anopheles gambiae G protein alpha
subunit AgOn protein.
Length = 134
Score = 27.9 bits (59), Expect = 0.31
Identities = 9/29 (31%), Positives = 23/29 (79%)
Frame = +1
Query: 220 GLLGAREMRILILGLDGAGKTTILYKLQV 306
G+ A+++++L+LG +GK+TI+ ++++
Sbjct: 14 GIQAAKDIKLLLLGAGESGKSTIVKQMKI 42
>AY724801-1|AAW50310.1| 134|Anopheles gambiae G protein alpha
subunit AgOa protein.
Length = 134
Score = 27.9 bits (59), Expect = 0.31
Identities = 9/29 (31%), Positives = 23/29 (79%)
Frame = +1
Query: 220 GLLGAREMRILILGLDGAGKTTILYKLQV 306
G+ A+++++L+LG +GK+TI+ ++++
Sbjct: 14 GIQAAKDIKLLLLGAGESGKSTIVKQMKI 42
>AY752910-1|AAV30084.1| 250|Anopheles gambiae peroxidase 15
protein.
Length = 250
Score = 23.8 bits (49), Expect = 5.0
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = -1
Query: 322 WSRPHRLVIYKELSSFRHRPIQVSKS 245
WS+ H+ + K LS RP + ++
Sbjct: 151 WSKAHKFIASKRLSDLIRRPYDLYRA 176
>U29486-1|AAC46995.1| 695|Anopheles gambiae ATP-binding-cassette
protein protein.
Length = 695
Score = 23.4 bits (48), Expect = 6.6
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1
Query: 247 ILILGLDGAGKTTILYKL 300
+ ++G GAGKTT+L L
Sbjct: 129 LAVMGSSGAGKTTLLNAL 146
>U29485-1|AAC46994.1| 695|Anopheles gambiae ATP-binding-cassette
protein protein.
Length = 695
Score = 23.4 bits (48), Expect = 6.6
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1
Query: 247 ILILGLDGAGKTTILYKL 300
+ ++G GAGKTT+L L
Sbjct: 129 LAVMGSSGAGKTTLLNAL 146
>U29484-1|AAC47423.1| 673|Anopheles gambiae ATP-binding-cassette
protein protein.
Length = 673
Score = 23.4 bits (48), Expect = 6.6
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1
Query: 247 ILILGLDGAGKTTILYKL 300
+ ++G GAGKTT+L L
Sbjct: 107 LAVMGSSGAGKTTLLNAL 124
>AJ438610-4|CAD27476.1| 593|Anopheles gambiae putative
transcription factor protein.
Length = 593
Score = 23.0 bits (47), Expect = 8.8
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 4/35 (11%)
Frame = -2
Query: 468 VYNIYYCICVAI--VTSPIRP--NTGLSPKIPHLE 376
++ I +C C+ I P TG+SP PH E
Sbjct: 408 IHRIQHCTCMLQNNARESISPASGTGMSPSYPHSE 442
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 702,992
Number of Sequences: 2352
Number of extensions: 13197
Number of successful extensions: 31
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67322955
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -