Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_G03
(763 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q7QVU3 Cluster: GLP_178_48815_48117; n=1; Giardia lambl... 37 0.47
UniRef50_UPI00015B932D Cluster: UPI00015B932D related cluster; n... 36 1.1
UniRef50_A0V6M7 Cluster: ATP-dependent transcriptional regulator... 35 1.9
UniRef50_Q4Q1T2 Cluster: Putative uncharacterized protein; n=3; ... 35 1.9
UniRef50_Q6CNF1 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 35 1.9
UniRef50_A6RZZ7 Cluster: Putative uncharacterized protein; n=1; ... 35 1.9
UniRef50_UPI00015B5672 Cluster: PREDICTED: similar to RACK7; n=1... 35 2.5
UniRef50_A4AKJ9 Cluster: ATP-dependent helicase HrpA; n=2; Actin... 35 2.5
UniRef50_Q9VR49 Cluster: CG3047-PA; n=3; Drosophila melanogaster... 34 3.3
UniRef50_Q872N0 Cluster: Putative uncharacterized protein B19A17... 34 3.3
UniRef50_A6S492 Cluster: Predicted protein; n=2; Eukaryota|Rep: ... 34 3.3
UniRef50_Q7WZL7 Cluster: Putative mating pair formation protein;... 34 4.4
UniRef50_A6G5J6 Cluster: Translation initiation factor IF-2; n=1... 34 4.4
UniRef50_Q0UZX4 Cluster: Putative uncharacterized protein; n=1; ... 34 4.4
UniRef50_Q2P155 Cluster: Putative uncharacterized protein XOO296... 33 5.8
UniRef50_Q0LR67 Cluster: Putative uncharacterized protein; n=1; ... 33 5.8
UniRef50_A1VA79 Cluster: Radical SAM domain protein; n=2; Desulf... 33 5.8
UniRef50_A0UNM8 Cluster: Putative uncharacterized protein; n=1; ... 33 5.8
UniRef50_A7NX26 Cluster: Chromosome chr5 scaffold_2, whole genom... 33 5.8
UniRef50_A0B9L0 Cluster: Putative uncharacterized protein; n=1; ... 33 5.8
UniRef50_Q1L8C0 Cluster: Novel tub family member protein; n=11; ... 33 7.7
UniRef50_Q11BJ4 Cluster: Putative uncharacterized protein precur... 33 7.7
UniRef50_Q0H230 Cluster: TMP repeat protein; n=2; unclassified M... 33 7.7
>UniRef50_Q7QVU3 Cluster: GLP_178_48815_48117; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_178_48815_48117 - Giardia lamblia
ATCC 50803
Length = 232
Score = 37.1 bits (82), Expect = 0.47
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = +1
Query: 607 PREDPCLPDGLRSRGQPCSGVRRPTH 684
P DPC PDGL P GV+RP H
Sbjct: 180 PSPDPCFPDGLGDFADPLQGVKRPKH 205
>UniRef50_UPI00015B932D Cluster: UPI00015B932D related cluster; n=1;
unknown|Rep: UPI00015B932D UniRef100 entry - unknown
Length = 1018
Score = 35.9 bits (79), Expect = 1.1
Identities = 18/34 (52%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = +2
Query: 308 HLRRVSYVGTRLNLVLAVPRVSA-SVGSAEGEIR 406
HLRR++YVG R+N + A P SA VG+ +G IR
Sbjct: 355 HLRRITYVGARVNALAAGPGGSAVFVGAEDGSIR 388
>UniRef50_A0V6M7 Cluster: ATP-dependent transcriptional regulator,
MalT-like, LuxR family; n=1; Delftia acidovorans
SPH-1|Rep: ATP-dependent transcriptional regulator,
MalT-like, LuxR family - Delftia acidovorans SPH-1
Length = 924
Score = 35.1 bits (77), Expect = 1.9
Identities = 30/104 (28%), Positives = 45/104 (43%), Gaps = 7/104 (6%)
Frame = -2
Query: 531 IAAPMSLTMMLSARETEAVASATTFSRASPPEAKDLRTRLKMRISPSAEPTDAETLGTAR 352
+ AP+ ++ + S T + A+ PEA RL + AEP D L A
Sbjct: 789 LLAPVLQRVLSPSLSLSQTPSLTRRTEAAEPEAAAHAQRLLSALGEPAEPADPPELQAAD 848
Query: 351 TKLSRVPT-----*LTRRKCR--ELKSSALTSVTRPEKLMMSDA 241
VP LTR++ R EL +S ++ EKL +SD+
Sbjct: 849 APQGPVPATALAEPLTRKELRVLELLASGYSNAAMAEKLFVSDS 892
>UniRef50_Q4Q1T2 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 5609
Score = 35.1 bits (77), Expect = 1.9
Identities = 21/77 (27%), Positives = 37/77 (48%)
Frame = -2
Query: 600 LTAGPTSRPKRLIWRLDLTSPIVIAAPMSLTMMLSARETEAVASATTFSRASPPEAKDLR 421
LT TS + + R+ L P+V ++ ++ ET+++ +RA+PP+ +D
Sbjct: 2310 LTLHRTSVVQVRVQRMLLDIPVVPLFSLAREVVRQVMETQSIEGMRPHARAAPPDGRDAE 2369
Query: 420 TRLKMRISPSAEPTDAE 370
+ I AE TD E
Sbjct: 2370 SPALTYIDMEAELTDVE 2386
>UniRef50_Q6CNF1 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome E of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=2; Saccharomycetales|Rep: Kluyveromyces lactis
strain NRRL Y-1140 chromosome E of strain NRRL Y- 1140
of Kluyveromyces lactis - Kluyveromyces lactis (Yeast)
(Candida sphaerica)
Length = 368
Score = 35.1 bits (77), Expect = 1.9
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 4/109 (3%)
Frame = -1
Query: 565 DLEVRFDIANSYCSSDVTDNDVVCEGDGSGSLS-NDVLKGKSSGSERPQDAAENADFSFS 389
D +V+ + S SS+ +D+ G GSGS S +D G S S D+ N+D S S
Sbjct: 20 DKKVKSSSSGSESSSNSSDSSSSGSGSGSGSGSDSDSDSGSDSSSSSSSDSESNSDSSSS 79
Query: 388 GTD*C*NSGNSQD*VESGAD---VADTTQMQGAEVISLDVSHAAREVND 251
+ +S +S S +D +D++ ++ S S A+ E +D
Sbjct: 80 SSSSSSSSSSSDSDSSSDSDSSSSSDSSSSSDSDSDSDSSSSASSESDD 128
>UniRef50_A6RZZ7 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 368
Score = 35.1 bits (77), Expect = 1.9
Identities = 22/94 (23%), Positives = 43/94 (45%)
Frame = -1
Query: 283 DVSHAAREVNDV*CTRRAPGASVAVTAERISRSQQFTDFIEQV*DHDVKDALRIRLEIDI 104
++ ARE++D+ AP V + ++ + + +E + D ++ RIR +D
Sbjct: 273 EIVKVARELDDL----DAPLTQVGIQFFQVGKVAEAKQALEDL-DDALEHRYRIRDMVDT 327
Query: 103 AMWHSRHAXXXXXXXXRPSLLIGFSLKKLNHRPA 2
W+ R ++G +KKL+H+PA
Sbjct: 328 VTWNGRDTEAGLTGDGIVKAVLGAIIKKLDHKPA 361
>UniRef50_UPI00015B5672 Cluster: PREDICTED: similar to RACK7; n=1;
Nasonia vitripennis|Rep: PREDICTED: similar to RACK7 -
Nasonia vitripennis
Length = 1098
Score = 34.7 bits (76), Expect = 2.5
Identities = 23/70 (32%), Positives = 32/70 (45%)
Frame = -2
Query: 543 SPIVIAAPMSLTMMLSARETEAVASATTFSRASPPEAKDLRTRLKMRISPSAEPTDAETL 364
+P A P S + S T+A ASA PP++ DLR+ P A P A+
Sbjct: 845 TPTTSATPPSSSSSSSYPLTKAAASANDAMVYIPPQSNDLRSSAYELPPPEAGPATAQIH 904
Query: 363 GTARTKLSRV 334
T+R +RV
Sbjct: 905 NTSRDLANRV 914
>UniRef50_A4AKJ9 Cluster: ATP-dependent helicase HrpA; n=2;
Actinobacteria (class)|Rep: ATP-dependent helicase HrpA -
marine actinobacterium PHSC20C1
Length = 1285
Score = 34.7 bits (76), Expect = 2.5
Identities = 33/109 (30%), Positives = 49/109 (44%), Gaps = 11/109 (10%)
Frame = +2
Query: 374 ASVGSAEGEIRIFSRV----LRSFASGGL-----ALENVVAEATASVSLADNII--VSDI 520
A V S G+ IFS+ LR+ S GL A ++VA + LAD I + +
Sbjct: 1105 ACVDSVMGDREIFSQSEFDSLRNEISAGLVDSLFATVSLVASIVSGARLADKAIRAATSM 1164
Query: 521 GAAITIGDVKSNLQINLFGREVGPAVNNFLEKIPVYLTDYAAEVSRVLE 667
+GD + L +F V L ++PVYLT A V+++ E
Sbjct: 1165 HLIAPLGDAREQLDSLVFPGFVSATGLTQLRRLPVYLTGIAHRVTKLTE 1213
>UniRef50_Q9VR49 Cluster: CG3047-PA; n=3; Drosophila melanogaster|Rep:
CG3047-PA - Drosophila melanogaster (Fruit fly)
Length = 1286
Score = 34.3 bits (75), Expect = 3.3
Identities = 31/110 (28%), Positives = 45/110 (40%), Gaps = 1/110 (0%)
Frame = -2
Query: 597 TAGPTSRPKRLIWRLDLTSPIVIAAPMSLTMMLSARETEAVASATTFSRASPPEAKDLRT 418
T+GPT+ R + +P P S T ++R T +TT + S P T
Sbjct: 984 TSGPTTTTPRSTTKTSTCAP-TTTTPRSTTTTSTSRPTTTTPRSTTTTTTSRPTT----T 1038
Query: 417 RLKMRISPS-AEPTDAETLGTARTKLSRVPT*LTRRKCRELKSSALTSVT 271
+ +PS + PT T T SR PT T R + + A T+ T
Sbjct: 1039 TPRSTTTPSTSRPTTTTPRSTTTTSTSR-PTTTTPRSTTKTSTCAPTTTT 1087
>UniRef50_Q872N0 Cluster: Putative uncharacterized protein
B19A17.220; n=1; Neurospora crassa|Rep: Putative
uncharacterized protein B19A17.220 - Neurospora crassa
Length = 667
Score = 34.3 bits (75), Expect = 3.3
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Frame = +1
Query: 490 PRRQHHCQ*HRSCNNYWRCQI*PPNQSL--RTRSWTSRQQLPREDPCLPDGLRSRGQPCS 663
P++QH Q H S Q PP ++L ++W R+ RE G +SR Q
Sbjct: 204 PQQQHQQQPHSSLA---AAQFNPPQKNLTPEQQAWLERKAQEREQQRAEQGAKSRPQRSK 260
Query: 664 GVRRPTHHQ 690
G+ R H Q
Sbjct: 261 GMTRQQHQQ 269
>UniRef50_A6S492 Cluster: Predicted protein; n=2; Eukaryota|Rep:
Predicted protein - Botryotinia fuckeliana B05.10
Length = 1220
Score = 34.3 bits (75), Expect = 3.3
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = -1
Query: 571 EIDLEVRFDIANSYCSSDVTDNDVVCEGD-GSGSLSNDVLKGKSSGSERPQDAAENADFS 395
E D+ D+ + +++V+ E D G+GS SN + K + G ++E++D
Sbjct: 1054 ESDVGGAIDLLTGEATGATMNDEVISEDDSGNGSSSNGMKKDEEGGECENSSSSEDSDVE 1113
Query: 394 FSGTD 380
+GTD
Sbjct: 1114 VAGTD 1118
>UniRef50_Q7WZL7 Cluster: Putative mating pair formation protein;
n=1; Stenotrophomonas maltophilia|Rep: Putative mating
pair formation protein - Xanthomonas maltophilia
(Pseudomonas maltophilia) (Stenotrophomonasmaltophilia)
Length = 560
Score = 33.9 bits (74), Expect = 4.4
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Frame = -1
Query: 490 GDGSGSLSNDVLKGKSSGSERPQDAAENADFSFSGT--D*C*NSGNSQD*VESGADVADT 317
G+G+G+ N++ +G G P DAA++++ +G D SG+ D ESG D
Sbjct: 362 GEGAGTALNELGEGVGRGGAAPGDAADSSEGGGAGDVGDSASESGDGGDGQESGEDEGGP 421
Query: 316 TQMQGAEVIS-LDVSHAAREVNDV 248
+ E S DV + + +DV
Sbjct: 422 SAANDEEYNSGTDVQDESGDGSDV 445
>UniRef50_A6G5J6 Cluster: Translation initiation factor IF-2; n=1;
Plesiocystis pacifica SIR-1|Rep: Translation initiation
factor IF-2 - Plesiocystis pacifica SIR-1
Length = 788
Score = 33.9 bits (74), Expect = 4.4
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Frame = +2
Query: 398 EIRIFSRVLRSFASGGL-ALENVVAEATASVSLADNIIVSDIGAAITIGDVKSNLQINLF 574
E+ + V+R+ G L A+E V AE S ++ II + +GA +T GD+K
Sbjct: 578 ELPTIALVIRADVQGSLEAVEQVFAEIR-SEKVSTKIIAAGVGA-VTEGDIKLATTARQS 635
Query: 575 GREVGPAVNNFLEKIPVYLTDYA 643
G V PA+ F K P +T A
Sbjct: 636 GGNVTPAIFGFGVKGPGKVTAMA 658
>UniRef50_Q0UZX4 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 537
Score = 33.9 bits (74), Expect = 4.4
Identities = 34/136 (25%), Positives = 56/136 (41%), Gaps = 1/136 (0%)
Frame = -2
Query: 684 MSWATYSRTRLTSAA*SVR*TGIFSRKLLTAGPTSRPKRLIWRLDLTSPIVIAAPMSLT- 508
+S ++ + ++SA+ S T F + + T RL R TS + + + T
Sbjct: 18 LSTSSSPQPSMSSASDSPMTTPNFDSTIFSTSDTQSESRLDTR---TSSVDVVPKLEETE 74
Query: 507 MMLSARETEAVASATTFSRASPPEAKDLRTRLKMRISPSAEPTDAETLGTARTKLSRVPT 328
+ L+ + E+ A T S P + R R + RI P PT AR+K
Sbjct: 75 LQLADVKEESFADDTAISPTEPVRIR--RARGRPRIHPPRSPTALSKQAKARSKTGCTTC 132
Query: 327 *LTRRKCRELKSSALT 280
++KC E K L+
Sbjct: 133 RKRKKKCDETKPFCLS 148
>UniRef50_Q2P155 Cluster: Putative uncharacterized protein XOO2967;
n=6; Xanthomonas|Rep: Putative uncharacterized protein
XOO2967 - Xanthomonas oryzae pv. oryzae (strain MAFF
311018)
Length = 1454
Score = 33.5 bits (73), Expect = 5.8
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Frame = +2
Query: 209 DGYAGSWSPPRASDIINFSGRVTDVKADDFSSLHLRRVSYV-GTRLNLVLAVPRVSASVG 385
D +G SP A D +N +G ++A + + +VS+ GTR+ +LA V ++
Sbjct: 816 DPASGQVSP--APDAVNRNGAAQVLQAHPAAVASMTQVSFAAGTRIAQILAKAGVDVTLP 873
Query: 386 SAEGE-IRIFSRVLRSFASGGLALENVVAEATAS 484
A + +RV SFA+ GL V +TAS
Sbjct: 874 PARSRNLAQGARVSASFAAAGLPATAAVDGSTAS 907
>UniRef50_Q0LR67 Cluster: Putative uncharacterized protein; n=1;
Herpetosiphon aurantiacus ATCC 23779|Rep: Putative
uncharacterized protein - Herpetosiphon aurantiacus ATCC
23779
Length = 878
Score = 33.5 bits (73), Expect = 5.8
Identities = 32/107 (29%), Positives = 47/107 (43%), Gaps = 1/107 (0%)
Frame = -2
Query: 525 APMSLTMMLSARETEAVASATTFSRASPPEAKDLRTRLKMRISPSAE-PTDAETLGTART 349
APM T ++ A AS T S +PP A TR+ + P+ E P A T+ T
Sbjct: 670 APMVSTASVAHAPASAPASHVTAS--TPPPAPARSTRIDVPTPPTQELPATAPTVATPPA 727
Query: 348 KLSRVPT*LTRRKCRELKSSALTSVTRPEKLMMSDARGGLQEPA*PS 208
+ ++ P ++ EL SSA RP + ++ G A PS
Sbjct: 728 R-AQTPAPPAAQQTPELASSAPRGPQRPPASVPTNGTGLGNSAAPPS 773
>UniRef50_A1VA79 Cluster: Radical SAM domain protein; n=2;
Desulfovibrio vulgaris subsp. vulgaris|Rep: Radical SAM
domain protein - Desulfovibrio vulgaris subsp. vulgaris
(strain DP4)
Length = 364
Score = 33.5 bits (73), Expect = 5.8
Identities = 23/74 (31%), Positives = 30/74 (40%)
Frame = -2
Query: 483 EAVASATTFSRASPPEAKDLRTRLKMRISPSAEPTDAETLGTARTKLSRVPT*LTRRKCR 304
E +A T F R P+ D+ T + P A P D ETL RT LS
Sbjct: 186 ENLALLTDFVRELAPDRVDVTTLSRPGTWPGARPADRETLAAWRTALSAAARPAGGHAVP 245
Query: 303 ELKSSALTSVTRPE 262
+ +LT T P+
Sbjct: 246 AAAAPSLTGRTAPD 259
>UniRef50_A0UNM8 Cluster: Putative uncharacterized protein; n=1;
Burkholderia multivorans ATCC 17616|Rep: Putative
uncharacterized protein - Burkholderia multivorans ATCC
17616
Length = 115
Score = 33.5 bits (73), Expect = 5.8
Identities = 21/62 (33%), Positives = 28/62 (45%)
Frame = -3
Query: 245 MHAEGSRSQRSRHGGEDQPLSTIHRFH*TSLRSRCQGCAEN*ARNRHRDVAQPTRRLGXR 66
+HA G R+Q H G +HR R + C+E +R RH A P RLG
Sbjct: 54 LHASGRRAQGDAHHGARAARMHVHRRKRRREREHERRCSERRSRTRH---AAPGGRLGSA 110
Query: 65 AK 60
+K
Sbjct: 111 SK 112
>UniRef50_A7NX26 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=3; core eudicotyledons|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 679
Score = 33.5 bits (73), Expect = 5.8
Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = -3
Query: 230 SRSQRSRHGGEDQPLSTIHRFH*TSL--RSRCQGCAEN*ARNRHRDVA 93
SR R + GG D+ L+ + F L + RCQ C EN R RH VA
Sbjct: 426 SRKTRKKEGGNDRKLTEKNNFANRILTQQERCQFCFENPTRPRHLVVA 473
>UniRef50_A0B9L0 Cluster: Putative uncharacterized protein; n=1;
Methanosaeta thermophila PT|Rep: Putative
uncharacterized protein - Methanosaeta thermophila
(strain DSM 6194 / PT) (Methanothrixthermophila (strain
DSM 6194 / PT))
Length = 432
Score = 33.5 bits (73), Expect = 5.8
Identities = 22/77 (28%), Positives = 34/77 (44%)
Frame = -1
Query: 685 DELGDVLQNTADLGCVVRQVDRDLL*EVVDGWSNFASEEIDLEVRFDIANSYCSSDVTDN 506
DEL + D+ +R + L E VD W+ E I + A Y + D
Sbjct: 251 DELDTIRGFLEDIDARLRSNALEDLPEFVDDWNRTIEERIGRGELSESARDYMLPEFDDM 310
Query: 505 DVVCEGDGSGSLSNDVL 455
D + G+GSL++D+L
Sbjct: 311 DYLSGRVGTGSLADDIL 327
>UniRef50_Q1L8C0 Cluster: Novel tub family member protein; n=11;
Clupeocephala|Rep: Novel tub family member protein -
Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 556
Score = 33.1 bits (72), Expect = 7.7
Identities = 24/78 (30%), Positives = 34/78 (43%)
Frame = +2
Query: 224 SWSPPRASDIINFSGRVTDVKADDFSSLHLRRVSYVGTRLNLVLAVPRVSASVGSAEGEI 403
SW+ S ++NF GRVT +F +H V Y+ + V A S +
Sbjct: 481 SWNEQTQSYVLNFHGRVTQASVKNFQIVHPDNVDYIVMQFGRV-ADDVFSMDYSFPMCAL 539
Query: 404 RIFSRVLRSFASGGLALE 457
+ F+ L SF G LA E
Sbjct: 540 QAFAITLSSF-DGKLACE 556
>UniRef50_Q11BJ4 Cluster: Putative uncharacterized protein
precursor; n=1; Mesorhizobium sp. BNC1|Rep: Putative
uncharacterized protein precursor - Mesorhizobium sp.
(strain BNC1)
Length = 297
Score = 33.1 bits (72), Expect = 7.7
Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 9/110 (8%)
Frame = +2
Query: 230 SPPRASDIINFSGRVTDVKADDFSSLHLRRVSYVGTRLNLV----LAVPRVSASVGSAEG 397
SP A+ + N + V A F S LR Y+G + + +A+PR+ +G+ G
Sbjct: 91 SPGLATILTNTQPLIAAVLAFAFLSERLRPSQYIGLGIGFLGIVTVAMPRLG--IGNGPG 148
Query: 398 EIRIFSRVLRSFASGGLALENVVAEATAS-----VSLADNIIVSDIGAAI 532
E+ S ++ A+ GLA+ NV+ + S V++A +++ + AI
Sbjct: 149 ELFALSYLI--LAASGLAVSNVLMKTVRSRIDPLVAMAAQLLLGAVPLAI 196
>UniRef50_Q0H230 Cluster: TMP repeat protein; n=2; unclassified
Myoviridae|Rep: TMP repeat protein - Geobacillus phage
GBSV1
Length = 955
Score = 33.1 bits (72), Expect = 7.7
Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 3/108 (2%)
Frame = +2
Query: 224 SWSPPRASDIINFSGRVTDVKADDFSSLHLRRVSYVGTRLNLVLAVPRVSASVGSAEGEI 403
S S A + F + D+K L S VG + + A P++SA++ + G +
Sbjct: 520 SISKINADPAVKFQKAIGDLKTA-LEPLMSVIASVVGAIASWMSANPQLSATITAIVGAV 578
Query: 404 RIFSRVLRSFASGGLALENVVAEATASVSLADN---IIVSDIGAAITI 538
IFS L + A +++NV+ T + + N + IG AIT+
Sbjct: 579 GIFSGALMALAPILYSIQNVLPIITKMLPMLGNAFKAMTGPIGLAITV 626
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 671,895,091
Number of Sequences: 1657284
Number of extensions: 12780870
Number of successful extensions: 42313
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 40495
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42252
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 63381147830
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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