Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_F23
         (717 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    26   0.35 
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    25   0.46 
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           25   0.46 
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    25   0.61 
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       25   0.81 
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    25   0.81 
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   3.3  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   3.3  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    23   3.3  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    23   3.3  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   5.7  
AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    22   5.7  
AY531876-1|AAT08870.1|   38|Tribolium castaneum unknown protein.       21   7.6  

>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 25.8 bits (54), Expect = 0.35
 Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
 Frame = +3

Query: 168 PTRLGIYDVDDGNYNSKFKQTPCSIP-GCKHIADTLLDYENHYNATHRYSCAQCKKVLPS 344
           PT     +V D + +  F    C+   G KH+   L ++E  +     + C +C K    
Sbjct: 118 PTSSVSPEVKDSSRDRPFTCEVCNRSFGYKHV---LQNHERTHTGEKPFECQECHKRFTR 174

Query: 345 PHFLDLHIQ 371
            H L  H++
Sbjct: 175 DHHLKTHMR 183


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 25.4 bits (53), Expect = 0.46
 Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
 Frame = +3

Query: 492 EHRIPKDFRFERQK-KDKNKMPNAMDVDEAKSNKFHLNNSKQKTFSKNKYAGKKFTSDK- 665
           E +I   F+  R K K  NK+PN  +V    +       +K K  +K + A     +DK 
Sbjct: 274 ERQIKIWFQNRRMKWKKDNKLPNTKNVRRKTNPAGVTTTTKGKVRAKTQNATPANNNDKR 333

Query: 666 KSRDETN 686
           KSR E +
Sbjct: 334 KSRGEVD 340


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 25.4 bits (53), Expect = 0.46
 Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
 Frame = +3

Query: 492 EHRIPKDFRFERQK-KDKNKMPNAMDVDEAKSNKFHLNNSKQKTFSKNKYAGKKFTSDK- 665
           E +I   F+  R K K  NK+PN  +V    +       +K K  +K + A     +DK 
Sbjct: 274 ERQIKIWFQNRRMKWKKDNKLPNTKNVRRKTNPAGVTTTTKGKVRAKTQNATPANNNDKR 333

Query: 666 KSRDETN 686
           KSR E +
Sbjct: 334 KSRGEVD 340


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 25.0 bits (52), Expect = 0.61
 Identities = 18/71 (25%), Positives = 34/71 (47%)
 Frame = -2

Query: 704 LHRTVHICFIPRFLVACEFLSCIFIFAKRLLFAIVQMEFIGLSLVYVHSVRHFVFILFLS 525
           LH+  HIC +    + C  L+   I  K L  A+ +   I + L+   +V + +    ++
Sbjct: 110 LHQICHICELHTIFLVCNVLTVFKIRYKDLNKAL-ESSKISVGLIRDTAVLYRLLADNVA 168

Query: 524 FKTKIFGYPVL 492
              KIFG+ ++
Sbjct: 169 NFNKIFGWSLI 179


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 24.6 bits (51), Expect = 0.81
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +3

Query: 282 ENHYNATHRYSCAQCKKVLPSPHFLDLHIQ 371
           ++H N  +RYSC  C       H L +H++
Sbjct: 279 KSHSNV-YRYSCRDCSYATKYCHSLKIHLR 307


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 24.6 bits (51), Expect = 0.81
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +3

Query: 282 ENHYNATHRYSCAQCKKVLPSPHFLDLHIQ 371
           ++H N  +RYSC  C       H L +H++
Sbjct: 37  KSHSNV-YRYSCRDCSYATKYCHSLKIHLR 65


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -1

Query: 216 WSYNFHRPHR 187
           W  NFH PHR
Sbjct: 598 WRRNFHGPHR 607


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -1

Query: 216 WSYNFHRPHR 187
           W  NFH PHR
Sbjct: 490 WRRNFHGPHR 499


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 13/67 (19%), Positives = 31/67 (46%)
 Frame = +3

Query: 267 TLLDYENHYNATHRYSCAQCKKVLPSPHFLDLHIQENHDSYFAVMAEKKPSYCCYIEECK 446
           T++ + ++   T  YS       +  P+F++L ++  +  Y  ++  +      Y+E   
Sbjct: 161 TIIFFASYQYGTKTYSLFIVFMTVILPYFINLLMELQYCHYLNILRVRYQLLNEYLETLV 220

Query: 447 QKFNNTA 467
           Q+ N T+
Sbjct: 221 QETNRTS 227


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 13/67 (19%), Positives = 31/67 (46%)
 Frame = +3

Query: 267 TLLDYENHYNATHRYSCAQCKKVLPSPHFLDLHIQENHDSYFAVMAEKKPSYCCYIEECK 446
           T++ + ++   T  YS       +  P+F++L ++  +  Y  ++  +      Y+E   
Sbjct: 161 TIIFFASYQYGTKTYSLFIVFMTVILPYFINLLMELQYCHYLNILRVRYQLLNEYLETLV 220

Query: 447 QKFNNTA 467
           Q+ N T+
Sbjct: 221 QETNRTS 227


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -1

Query: 285 FRNLTVYQLCVYILVCCTEFV 223
           F +L  YQ+ + I  CC E V
Sbjct: 237 FNSLFGYQIILVIFDCCLETV 257


>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +1

Query: 148 CLYMINNLLDLEFTMWTME 204
           C Y++ + L   FT W ME
Sbjct: 166 CSYVVRDKLLKAFTRWRME 184


>AY531876-1|AAT08870.1|   38|Tribolium castaneum unknown protein.
          Length = 38

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = +3

Query: 99  EKLKEYGVGKRMLDDVLFIHDKQPTRLGI 185
           E  +  G+GKR+ + +L     +P ++ I
Sbjct: 2   ESRQRTGLGKRLFEHMLQTESIEPVKMAI 30


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,511
Number of Sequences: 336
Number of extensions: 4293
Number of successful extensions: 17
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)