Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_F13
(623 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82206-1|CAI42711.1| 272|Homo sapiens ubiquinol-cytochrome c re... 208 9e-54
L32977-1|AAC41754.1| 274|Homo sapiens Rieske Fe-S protein protein. 208 9e-54
BC010035-1|AAH10035.1| 274|Homo sapiens ubiquinol-cytochrome c ... 208 9e-54
BC000649-1|AAH00649.1| 274|Homo sapiens ubiquinol-cytochrome c ... 208 9e-54
AC007786-1|AAD38242.1| 274|Homo sapiens UCRI_HUMAN protein. 208 9e-54
BC067832-1|AAH67832.1| 274|Homo sapiens ubiquinol-cytochrome c ... 205 1e-52
Y17151-1|CAA76658.2| 1527|Homo sapiens multidrug resistance prot... 31 2.5
AJ294545-1|CAC69553.1| 1514|Homo sapiens multidrug resistance as... 31 2.5
AF104943-1|AAD04170.1| 1527|Homo sapiens ABC transporter MOAT-D ... 31 2.5
AF085691-1|AAD02846.1| 1238|Homo sapiens multidrug resistance-as... 31 2.5
AF085690-1|AAD02845.1| 1527|Homo sapiens multidrug resistance-as... 31 2.5
AF083552-1|AAC34668.1| 1527|Homo sapiens canalicular multispecif... 31 2.5
AF009670-1|AAD01430.1| 1528|Homo sapiens MRP3 protein. 31 2.5
AB208954-1|BAD92191.1| 1533|Homo sapiens ATP-binding cassette, s... 31 2.5
AB010887-1|BAA28146.1| 1527|Homo sapiens multidrug resistance-as... 31 2.5
U83659-1|AAB71756.1| 485|Homo sapiens multidrug resistance-asso... 31 3.3
BC112113-1|AAI12114.1| 420|Homo sapiens hypothetical protein LO... 30 7.6
BC104779-1|AAI04780.1| 420|Homo sapiens FLJ25476 protein protein. 30 7.6
AL513327-1|CAI13953.1| 420|Homo sapiens zinc finger protein 362... 30 7.6
>Z82206-1|CAI42711.1| 272|Homo sapiens ubiquinol-cytochrome c
reductase, Rieske iron-sulfur polypeptide-like 1
protein.
Length = 272
Score = 208 bits (509), Expect = 9e-54
Identities = 104/205 (50%), Positives = 132/205 (64%), Gaps = 3/205 (1%)
Frame = +3
Query: 18 VANSLKPLV--VVP-TPSEKTVVLPLPKTSTVETLHGSLPIQGLKVKAGTRVPAQVRFAH 188
VA +L+PLV VP TP + + L P S E+L G + L G VPA V ++H
Sbjct: 20 VAGALRPLVQATVPATPEQPVLDLKRPFLSR-ESLSGQAVRRPLVASVGLNVPASVCYSH 78
Query: 189 TDISYPDFSAYRRKETQDPTSKANETIDERQSFTYLIXXXXXXXXXXXXXXXXTHFVSSM 368
TD+ PDFS YRR E D T + E+ + R+ F+YL+ T FVSSM
Sbjct: 79 TDVKVPDFSEYRRLEVLDSTKSSRESTEARKGFSYLVTGVTTVGVAYAAKNAVTQFVSSM 138
Query: 369 SAAADVLALAKIEIKLAEIPEGKSVTFKWRGKPLFIRHRTADEISTXKAVPVDTLRDPQH 548
SA+ADVLALAKIEIKL++IPEGK++ FKWRGKPLF+RHRT EI AV + LRDPQH
Sbjct: 139 SASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIKQEAAVELSQLRDPQH 198
Query: 549 DDQRTQNPKWLVVIGVCTHLGCVPV 623
D R + P+W+++IGVCTHLGCVP+
Sbjct: 199 DLDRVKKPEWVILIGVCTHLGCVPI 223
>L32977-1|AAC41754.1| 274|Homo sapiens Rieske Fe-S protein protein.
Length = 274
Score = 208 bits (509), Expect = 9e-54
Identities = 105/205 (51%), Positives = 132/205 (64%), Gaps = 3/205 (1%)
Frame = +3
Query: 18 VANSLKPLV--VVP-TPSEKTVVLPLPKTSTVETLHGSLPIQGLKVKAGTRVPAQVRFAH 188
VA +L+PLV VP TP + + L P S E+L G + L G VPA V ++H
Sbjct: 22 VAGALRPLVQATVPATPEQPVLDLKRPFLSR-ESLSGQAVRRPLVASVGLNVPASVCYSH 80
Query: 189 TDISYPDFSAYRRKETQDPTSKANETIDERQSFTYLIXXXXXXXXXXXXXXXXTHFVSSM 368
TDI PDFS YRR E D T + E+ + R+ F+YL+ T FVSSM
Sbjct: 81 TDIKVPDFSEYRRLEVLDSTKSSRESSEARKGFSYLVTGVTTVGVAYAAKNAVTQFVSSM 140
Query: 369 SAAADVLALAKIEIKLAEIPEGKSVTFKWRGKPLFIRHRTADEISTXKAVPVDTLRDPQH 548
SA+ADVLALAKIEIKL++IPEGK++ FKWRGKPLF+RHRT EI AV + LRDPQH
Sbjct: 141 SASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDPQH 200
Query: 549 DDQRTQNPKWLVVIGVCTHLGCVPV 623
D R + P+W+++IGVCTHLGCVP+
Sbjct: 201 DLDRVKKPEWVILIGVCTHLGCVPI 225
>BC010035-1|AAH10035.1| 274|Homo sapiens ubiquinol-cytochrome c
reductase, Rieske iron-sulfur polypeptide 1 protein.
Length = 274
Score = 208 bits (509), Expect = 9e-54
Identities = 105/205 (51%), Positives = 132/205 (64%), Gaps = 3/205 (1%)
Frame = +3
Query: 18 VANSLKPLV--VVP-TPSEKTVVLPLPKTSTVETLHGSLPIQGLKVKAGTRVPAQVRFAH 188
VA +L+PLV VP TP + + L P S E+L G + L G VPA V ++H
Sbjct: 22 VAGALRPLVQATVPATPEQPVLDLKRPFLSR-ESLSGQAVRRPLVASVGLNVPASVCYSH 80
Query: 189 TDISYPDFSAYRRKETQDPTSKANETIDERQSFTYLIXXXXXXXXXXXXXXXXTHFVSSM 368
TDI PDFS YRR E D T + E+ + R+ F+YL+ T FVSSM
Sbjct: 81 TDIKVPDFSEYRRLEVLDSTKSSRESSEARKGFSYLVTGVTTVGVAYAAKNAVTQFVSSM 140
Query: 369 SAAADVLALAKIEIKLAEIPEGKSVTFKWRGKPLFIRHRTADEISTXKAVPVDTLRDPQH 548
SA+ADVLALAKIEIKL++IPEGK++ FKWRGKPLF+RHRT EI AV + LRDPQH
Sbjct: 141 SASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDPQH 200
Query: 549 DDQRTQNPKWLVVIGVCTHLGCVPV 623
D R + P+W+++IGVCTHLGCVP+
Sbjct: 201 DLDRVKKPEWVILIGVCTHLGCVPI 225
>BC000649-1|AAH00649.1| 274|Homo sapiens ubiquinol-cytochrome c
reductase, Rieske iron-sulfur polypeptide 1 protein.
Length = 274
Score = 208 bits (509), Expect = 9e-54
Identities = 105/205 (51%), Positives = 132/205 (64%), Gaps = 3/205 (1%)
Frame = +3
Query: 18 VANSLKPLV--VVP-TPSEKTVVLPLPKTSTVETLHGSLPIQGLKVKAGTRVPAQVRFAH 188
VA +L+PLV VP TP + + L P S E+L G + L G VPA V ++H
Sbjct: 22 VAGALRPLVQATVPATPEQPVLDLKRPFLSR-ESLSGQAVRRPLVASVGLNVPASVCYSH 80
Query: 189 TDISYPDFSAYRRKETQDPTSKANETIDERQSFTYLIXXXXXXXXXXXXXXXXTHFVSSM 368
TDI PDFS YRR E D T + E+ + R+ F+YL+ T FVSSM
Sbjct: 81 TDIKVPDFSEYRRLEVLDSTKSSRESSEARKGFSYLVTGVTTVGVAYAAKNAVTQFVSSM 140
Query: 369 SAAADVLALAKIEIKLAEIPEGKSVTFKWRGKPLFIRHRTADEISTXKAVPVDTLRDPQH 548
SA+ADVLALAKIEIKL++IPEGK++ FKWRGKPLF+RHRT EI AV + LRDPQH
Sbjct: 141 SASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDPQH 200
Query: 549 DDQRTQNPKWLVVIGVCTHLGCVPV 623
D R + P+W+++IGVCTHLGCVP+
Sbjct: 201 DLDRVKKPEWVILIGVCTHLGCVPI 225
>AC007786-1|AAD38242.1| 274|Homo sapiens UCRI_HUMAN protein.
Length = 274
Score = 208 bits (509), Expect = 9e-54
Identities = 105/205 (51%), Positives = 132/205 (64%), Gaps = 3/205 (1%)
Frame = +3
Query: 18 VANSLKPLV--VVP-TPSEKTVVLPLPKTSTVETLHGSLPIQGLKVKAGTRVPAQVRFAH 188
VA +L+PLV VP TP + + L P S E+L G + L G VPA V ++H
Sbjct: 22 VAGALRPLVQATVPATPEQPVLDLKRPFLSR-ESLSGQAVRRPLVASVGLNVPASVCYSH 80
Query: 189 TDISYPDFSAYRRKETQDPTSKANETIDERQSFTYLIXXXXXXXXXXXXXXXXTHFVSSM 368
TDI PDFS YRR E D T + E+ + R+ F+YL+ T FVSSM
Sbjct: 81 TDIKVPDFSEYRRLEVLDSTKSSRESSEARKGFSYLVTGVTTVGVAYAAKNAVTQFVSSM 140
Query: 369 SAAADVLALAKIEIKLAEIPEGKSVTFKWRGKPLFIRHRTADEISTXKAVPVDTLRDPQH 548
SA+ADVLALAKIEIKL++IPEGK++ FKWRGKPLF+RHRT EI AV + LRDPQH
Sbjct: 141 SASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDPQH 200
Query: 549 DDQRTQNPKWLVVIGVCTHLGCVPV 623
D R + P+W+++IGVCTHLGCVP+
Sbjct: 201 DLDRVKKPEWVILIGVCTHLGCVPI 225
>BC067832-1|AAH67832.1| 274|Homo sapiens ubiquinol-cytochrome c
reductase, Rieske iron-sulfur polypeptide 1 protein.
Length = 274
Score = 205 bits (500), Expect = 1e-52
Identities = 104/205 (50%), Positives = 131/205 (63%), Gaps = 3/205 (1%)
Frame = +3
Query: 18 VANSLKPLV--VVP-TPSEKTVVLPLPKTSTVETLHGSLPIQGLKVKAGTRVPAQVRFAH 188
VA +L+PLV VP TP + + L P S E+L G + L G V A V ++H
Sbjct: 22 VAGALRPLVQATVPATPEQPVLDLKRPFLSR-ESLSGQAVRRPLVASVGLNVHASVCYSH 80
Query: 189 TDISYPDFSAYRRKETQDPTSKANETIDERQSFTYLIXXXXXXXXXXXXXXXXTHFVSSM 368
TDI PDFS YRR E D T + E+ + R+ F+YL+ T FVSSM
Sbjct: 81 TDIKVPDFSEYRRLEVLDSTKSSRESSEARKGFSYLVTGVTTVGVAYAAKNAVTQFVSSM 140
Query: 369 SAAADVLALAKIEIKLAEIPEGKSVTFKWRGKPLFIRHRTADEISTXKAVPVDTLRDPQH 548
SA+ADVLALAKIEIKL++IPEGK++ FKWRGKPLF+RHRT EI AV + LRDPQH
Sbjct: 141 SASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDPQH 200
Query: 549 DDQRTQNPKWLVVIGVCTHLGCVPV 623
D R + P+W+++IGVCTHLGCVP+
Sbjct: 201 DLDRVKKPEWVILIGVCTHLGCVPI 225
>Y17151-1|CAA76658.2| 1527|Homo sapiens multidrug resistance protein 3
(ABCC3) protein.
Length = 1527
Score = 31.5 bits (68), Expect = 2.5
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 3/95 (3%)
Frame = +3
Query: 24 NSLKPLVVV--PTPSEKTVVLPLPKTST-VETLHGSLPIQGLKVKAGTRVPAQVRFAHTD 194
N++ LVV+ TP V+LPL T V+ + + Q ++++ +R P F+ T
Sbjct: 1096 NAISTLVVIMASTPLFTVVILPLAVLYTLVQRFYAATSRQLKRLESVSRSPIYSHFSETV 1155
Query: 195 ISYPDFSAYRRKETQDPTSKANETIDERQSFTYLI 299
AY R + S ++R + Y+I
Sbjct: 1156 TGASVIRAYNRSRDFEIISDTKVDANQRSCYPYII 1190
>AJ294545-1|CAC69553.1| 1514|Homo sapiens multidrug resistance
associated protein protein.
Length = 1514
Score = 31.5 bits (68), Expect = 2.5
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 3/95 (3%)
Frame = +3
Query: 24 NSLKPLVVV--PTPSEKTVVLPLPKTST-VETLHGSLPIQGLKVKAGTRVPAQVRFAHTD 194
N++ LVV+ TP V+LPL T V+ + + Q ++++ +R P F+ T
Sbjct: 1096 NAISTLVVIMASTPLFTVVILPLAVLYTLVQRFYAATSRQLKRLESVSRSPIYSHFSETV 1155
Query: 195 ISYPDFSAYRRKETQDPTSKANETIDERQSFTYLI 299
AY R + S ++R + Y+I
Sbjct: 1156 TGASVIRAYNRSRDFEIISDTKVDANQRSCYPYII 1190
>AF104943-1|AAD04170.1| 1527|Homo sapiens ABC transporter MOAT-D
protein.
Length = 1527
Score = 31.5 bits (68), Expect = 2.5
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 3/95 (3%)
Frame = +3
Query: 24 NSLKPLVVV--PTPSEKTVVLPLPKTST-VETLHGSLPIQGLKVKAGTRVPAQVRFAHTD 194
N++ LVV+ TP V+LPL T V+ + + Q ++++ +R P F+ T
Sbjct: 1096 NAISTLVVIMASTPLFTVVILPLAVLYTLVQRFYAATSRQLKRLESVSRSPIYSHFSETV 1155
Query: 195 ISYPDFSAYRRKETQDPTSKANETIDERQSFTYLI 299
AY R + S ++R + Y+I
Sbjct: 1156 TGASVIRAYNRSRDFEIISDTKVDANQRSCYPYII 1190
>AF085691-1|AAD02846.1| 1238|Homo sapiens multidrug
resistance-associated protein 3A protein.
Length = 1238
Score = 31.5 bits (68), Expect = 2.5
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 3/95 (3%)
Frame = +3
Query: 24 NSLKPLVVV--PTPSEKTVVLPLPKTST-VETLHGSLPIQGLKVKAGTRVPAQVRFAHTD 194
N++ LVV+ TP V+LPL T V+ + + Q ++++ +R P F+ T
Sbjct: 1096 NAISTLVVIMASTPLFTVVILPLAVLYTLVQRFYAATSRQLKRLESVSRSPIYSHFSETV 1155
Query: 195 ISYPDFSAYRRKETQDPTSKANETIDERQSFTYLI 299
AY R + S ++R + Y+I
Sbjct: 1156 TGASVIRAYNRSRDFEIISDTKVDANQRSCYPYII 1190
>AF085690-1|AAD02845.1| 1527|Homo sapiens multidrug
resistance-associated protein 3 protein.
Length = 1527
Score = 31.5 bits (68), Expect = 2.5
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 3/95 (3%)
Frame = +3
Query: 24 NSLKPLVVV--PTPSEKTVVLPLPKTST-VETLHGSLPIQGLKVKAGTRVPAQVRFAHTD 194
N++ LVV+ TP V+LPL T V+ + + Q ++++ +R P F+ T
Sbjct: 1096 NAISTLVVIMASTPLFTVVILPLAVLYTLVQRFYAATSRQLKRLESVSRSPIYSHFSETV 1155
Query: 195 ISYPDFSAYRRKETQDPTSKANETIDERQSFTYLI 299
AY R + S ++R + Y+I
Sbjct: 1156 TGASVIRAYNRSRDFEIISDTKVDANQRSCYPYII 1190
>AF083552-1|AAC34668.1| 1527|Homo sapiens canalicular multispecific
organic anion transporter 2 protein.
Length = 1527
Score = 31.5 bits (68), Expect = 2.5
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 3/95 (3%)
Frame = +3
Query: 24 NSLKPLVVV--PTPSEKTVVLPLPKTST-VETLHGSLPIQGLKVKAGTRVPAQVRFAHTD 194
N++ LVV+ TP V+LPL T V+ + + Q ++++ +R P F+ T
Sbjct: 1096 NAISTLVVIMASTPLFTVVILPLAVLYTLVQRFYAATSRQLKRLESVSRSPIYSHFSETV 1155
Query: 195 ISYPDFSAYRRKETQDPTSKANETIDERQSFTYLI 299
AY R + S ++R + Y+I
Sbjct: 1156 TGASVIRAYNRSRDFEIISDTKVDANQRSCYPYII 1190
>AF009670-1|AAD01430.1| 1528|Homo sapiens MRP3 protein.
Length = 1528
Score = 31.5 bits (68), Expect = 2.5
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 3/95 (3%)
Frame = +3
Query: 24 NSLKPLVVV--PTPSEKTVVLPLPKTST-VETLHGSLPIQGLKVKAGTRVPAQVRFAHTD 194
N++ LVV+ TP V+LPL T V+ + + Q ++++ +R P F+ T
Sbjct: 1097 NAISTLVVIMASTPLFTVVILPLAVLYTLVQRFYAATSRQLKRLESVSRSPIYSHFSETV 1156
Query: 195 ISYPDFSAYRRKETQDPTSKANETIDERQSFTYLI 299
AY R + S ++R + Y+I
Sbjct: 1157 TGASVIRAYNRSRDFEIISDTKVDANQRSCYPYII 1191
>AB208954-1|BAD92191.1| 1533|Homo sapiens ATP-binding cassette,
sub-family C, member 3 isoform MRP3 variant protein.
Length = 1533
Score = 31.5 bits (68), Expect = 2.5
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 3/95 (3%)
Frame = +3
Query: 24 NSLKPLVVV--PTPSEKTVVLPLPKTST-VETLHGSLPIQGLKVKAGTRVPAQVRFAHTD 194
N++ LVV+ TP V+LPL T V+ + + Q ++++ +R P F+ T
Sbjct: 1102 NAISTLVVIMASTPLFTVVILPLAVLYTLVQRFYAATSRQLKRLESVSRSPIYSHFSETV 1161
Query: 195 ISYPDFSAYRRKETQDPTSKANETIDERQSFTYLI 299
AY R + S ++R + Y+I
Sbjct: 1162 TGASVIRAYNRSRDFEIISDTKVDANQRSCYPYII 1196
>AB010887-1|BAA28146.1| 1527|Homo sapiens multidrug
resistance-associated protein(MRP)-like protein-2 (MLP-2)
protein.
Length = 1527
Score = 31.5 bits (68), Expect = 2.5
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 3/95 (3%)
Frame = +3
Query: 24 NSLKPLVVV--PTPSEKTVVLPLPKTST-VETLHGSLPIQGLKVKAGTRVPAQVRFAHTD 194
N++ LVV+ TP V+LPL T V+ + + Q ++++ +R P F+ T
Sbjct: 1096 NAISTLVVIMASTPLFTVVILPLAVLYTLVQRFYAATSRQLKRLESVSRSPIYSHFSETV 1155
Query: 195 ISYPDFSAYRRKETQDPTSKANETIDERQSFTYLI 299
AY R + S ++R + Y+I
Sbjct: 1156 TGASVIRAYNRSRDFEIISDTKVDANQRSCYPYII 1190
>U83659-1|AAB71756.1| 485|Homo sapiens multidrug
resistance-associated protein homolog protein.
Length = 485
Score = 31.1 bits (67), Expect = 3.3
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 3/95 (3%)
Frame = +3
Query: 24 NSLKPLVVV--PTPSEKTVVLPLPKTST-VETLHGSLPIQGLKVKAGTRVPAQVRFAHTD 194
N++ LVV+ TP V+LPL T V+ + + Q ++++ +R P F+ T
Sbjct: 54 NAISTLVVIMASTPLFTVVILPLAVLYTLVQRCYAATSRQLKRLESVSRSPIYSHFSETV 113
Query: 195 ISYPDFSAYRRKETQDPTSKANETIDERQSFTYLI 299
AY R + S ++R + Y+I
Sbjct: 114 TGASVIRAYNRSRDFEIISDTKVDANQRSCYPYII 148
>BC112113-1|AAI12114.1| 420|Homo sapiens hypothetical protein
LOC149076 protein.
Length = 420
Score = 29.9 bits (64), Expect = 7.6
Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +3
Query: 21 ANSLKPLVVVPTPSEKT-VVLPLPKTSTVETLH 116
A+S +PL+V P P+E + V+ LPK V LH
Sbjct: 63 ASSQQPLLVPPAPAESSQAVMSLPKLQQVPGLH 95
>BC104779-1|AAI04780.1| 420|Homo sapiens FLJ25476 protein protein.
Length = 420
Score = 29.9 bits (64), Expect = 7.6
Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +3
Query: 21 ANSLKPLVVVPTPSEKT-VVLPLPKTSTVETLH 116
A+S +PL+V P P+E + V+ LPK V LH
Sbjct: 63 ASSQQPLLVPPAPAESSQAVMSLPKLQQVPGLH 95
>AL513327-1|CAI13953.1| 420|Homo sapiens zinc finger protein 362
protein.
Length = 420
Score = 29.9 bits (64), Expect = 7.6
Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +3
Query: 21 ANSLKPLVVVPTPSEKT-VVLPLPKTSTVETLH 116
A+S +PL+V P P+E + V+ LPK V LH
Sbjct: 63 ASSQQPLLVPPAPAESSQAVMSLPKLQQVPGLH 95
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,337,614
Number of Sequences: 237096
Number of extensions: 1935788
Number of successful extensions: 4175
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 4016
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4175
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6747805200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -