Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_F13
         (623 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          23   2.4  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      23   2.4  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    23   2.4  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    23   2.4  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    22   5.6  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   9.8  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    21   9.8  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +1

Query: 163 YLPKYVSLILTFHTRIS 213
           ++ KYV +I   HTRIS
Sbjct: 318 HMQKYVQMIHDLHTRIS 334


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +1

Query: 163 YLPKYVSLILTFHTRIS 213
           ++ KYV +I   HTRIS
Sbjct: 318 HMQKYVQMIHDLHTRIS 334


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 59  GCWYDHQRFQAVSYDL 12
           GCW +HQ  Q  + D+
Sbjct: 329 GCWNEHQPLQRQNMDM 344


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 59  GCWYDHQRFQAVSYDL 12
           GCW +HQ  Q  + D+
Sbjct: 329 GCWNEHQPLQRENMDM 344


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = -1

Query: 59  GCWYDHQRFQAVSYDL 12
           GCW +HQ  Q  + ++
Sbjct: 326 GCWNEHQSLQRQNLEM 341


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 197 NVSMSETYLGRYSSSCFDL 141
           + + SE +L RY + CF L
Sbjct: 728 STARSEQFLCRYEAHCFAL 746


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 11/46 (23%), Positives = 20/46 (43%)
 Frame = +1

Query: 421 KFQKESLSPSNGEENHCLSVTGQQTKSRPXRLCLSTRSVTLSTTIN 558
           +  K+ LSP+  + + C  +T  + K     +        LST +N
Sbjct: 268 QISKKKLSPATPKGSKCSMITTPEIKKEVEDMEYDDIKTELSTGMN 313


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,513
Number of Sequences: 438
Number of extensions: 3712
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18582456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)