Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_F11
         (616 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     25   0.51 
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   1.5  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   2.7  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   4.7  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   6.2  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   6.2  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   6.2  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   8.2  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   8.2  

>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 25.0 bits (52), Expect = 0.51
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 191 VHGPENDACKPQDAKQSEQLVPVAPAG 271
           +  PE+D  K QD  + +  +P AP G
Sbjct: 233 ISDPEDDDDKDQDMDEGDLPLPAAPGG 259


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 293 CSQLYPDQPNPLQVTTRL 346
           C QL PD PN  ++  +L
Sbjct: 366 CGQLNPDNPNVYEILEKL 383


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +1

Query: 166 VIRCVCAASSWT 201
           V+RCVCA S+ T
Sbjct: 917 VVRCVCAGSTGT 928


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = -2

Query: 357 NQYL-SLVVTCRGLGWSGYSWEQASHNAFKPAGATGTSCSDCLAS 226
           NQY+ S   TC  LG+SG + +    +  + +   G +C D + S
Sbjct: 1   NQYVDSYTCTCP-LGFSGINCQTNDEDCTETSCMNGGTCIDGINS 44



 Score = 21.4 bits (43), Expect = 6.2
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +2

Query: 86  IVNNIAMSCPSG 121
           +VN+ + SCPSG
Sbjct: 240 LVNSFSCSCPSG 251


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = +2

Query: 275 KALCDACSQLYPDQPNPLQVTTR 343
           K  CD   Q Y   PN   +TTR
Sbjct: 472 KEKCDIKGQPYCSLPNSCALTTR 494


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = +2

Query: 275 KALCDACSQLYPDQPNPLQVTTR 343
           K  CD   Q Y   PN   +TTR
Sbjct: 479 KEKCDIKGQPYCSLPNSCALTTR 501


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = +2

Query: 233 KQSEQLVPVAPAGLKALCDACSQL 304
           K  EQ+V +       LCD C  +
Sbjct: 507 KSEEQIVDICIRSHDKLCDVCDSV 530


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 4/36 (11%)
 Frame = -2

Query: 543 RSQTAGARPRTAPRDPAEGGPS----HPREGLTDRN 448
           R+     + R   +DPA+GG S      R GL  +N
Sbjct: 549 RANATRGKKRKRKQDPADGGNSMKKCRARYGLDQQN 584


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 4/36 (11%)
 Frame = -2

Query: 543 RSQTAGARPRTAPRDPAEGGPS----HPREGLTDRN 448
           R+     + R   +DPA+GG S      R GL  +N
Sbjct: 441 RANATRGKKRKRKQDPADGGNSMKKCRARYGLDQQN 476


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,790
Number of Sequences: 336
Number of extensions: 3470
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15666150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)