Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_F11
(616 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1046 + 30405805-30405858,30405991-30407950,30408460-30408476 33 0.18
05_03_0394 - 13440871-13441098,13441197-13441394,13441491-134415... 32 0.31
07_01_0214 + 1595917-1596526,1597127-1597140,1598414-1598743,159... 31 0.96
12_02_0459 + 19267426-19267792,19268691-19268779 30 1.7
06_03_0186 - 17653101-17653205,17653594-17653660,17654744-176548... 30 1.7
04_04_1049 + 30414545-30414596,30414732-30414853,30415121-304151... 30 1.7
02_04_0171 + 20581995-20582354,20582509-20583141,20584954-20585058 30 1.7
08_02_0588 + 19036509-19039235 29 2.2
11_06_0232 + 21559467-21559532,21559586-21560200 29 2.9
02_05_1316 - 35679456-35679538,35679660-35679722,35679824-356799... 29 2.9
02_03_0261 - 17011667-17012191 29 2.9
05_02_0037 + 5883285-5884292 29 3.9
03_02_0330 + 7502593-7504956,7505020-7506312,7522011-7522235 29 3.9
02_04_0243 + 21244743-21245837,21245921-21246148,21246240-212464... 29 3.9
01_04_0112 - 16127785-16128279,16128883-16128986,16129304-16129454 29 3.9
09_06_0176 + 21351884-21352693,21352821-21352976,21353425-213536... 28 5.1
04_03_0041 + 10046063-10046170,10046284-10046742 28 5.1
03_02_0256 + 6899424-6899876,6900084-6900163,6900475-6900820 28 5.1
03_02_0229 + 6594931-6595030,6595573-6595826,6595935-6596061,659... 28 5.1
02_02_0240 + 8196140-8198248,8198381-8198650 28 5.1
01_06_0784 + 31979670-31979976,31980092-31980337,31980428-319805... 28 5.1
01_06_0565 + 30287253-30287502,30287522-30289010,30289133-302892... 28 5.1
01_03_0027 + 11775591-11776046 28 5.1
01_03_0012 + 11638363-11638476,11638854-11640678,11641855-116420... 28 5.1
08_02_0590 + 19044193-19044364,19044464-19045047,19045085-190460... 28 6.8
06_03_0969 - 26413534-26413594,26415020-26415318 28 6.8
05_04_0144 + 18389877-18390431 28 6.8
01_06_0924 - 33058194-33058697,33058798-33060147,33060234-330603... 28 6.8
01_06_0243 + 27833497-27834042,27834144-27834238,27834400-27835567 28 6.8
10_08_0799 - 20650799-20650947,20651022-20651114,20651906-206519... 27 8.9
08_02_0592 + 19064025-19066596,19067036-19067084,19068530-190686... 27 8.9
06_01_0500 + 3584743-3585516 27 8.9
04_04_0409 + 24992944-24993421,24993920-24994000,24994400-249946... 27 8.9
01_05_0393 - 21732178-21732287,21732875-21733436 27 8.9
>04_04_1046 + 30405805-30405858,30405991-30407950,30408460-30408476
Length = 676
Score = 33.1 bits (72), Expect = 0.18
Identities = 18/41 (43%), Positives = 20/41 (48%)
Frame = -2
Query: 576 RQPRAGTSARCRSQTAGARPRTAPRDPAEGGPSHPREGLTD 454
R+P + R R GA P APR AEGG S R G D
Sbjct: 173 REPSSAVQERGRGLHRGASPAAAPRVGAEGGSSTRRLGRLD 213
>05_03_0394 -
13440871-13441098,13441197-13441394,13441491-13441594,
13441687-13442551,13442677-13443045,13443372-13443533,
13443838-13444056,13444138-13444656,13444742-13444819,
13446041-13446163
Length = 954
Score = 32.3 bits (70), Expect = 0.31
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = -2
Query: 615 AREPPATAGGAXPRQPRAGTSARCRSQTAGARPRTAPRDPAEGGPSHPRE 466
+R+P A P PR G R R +T P +AP+ G HP E
Sbjct: 4 SRDPGEEASAPPPPPPRRGEKRRMRGRTPSPEPASAPQ---TNGKWHPHE 50
>07_01_0214 +
1595917-1596526,1597127-1597140,1598414-1598743,
1598853-1598963,1599113-1599269,1603366-1603619,
1603762-1603960,1604341-1604498
Length = 610
Score = 30.7 bits (66), Expect = 0.96
Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 3/53 (5%)
Frame = -2
Query: 603 PATAGGAXPRQPRAGTSARC---RSQTAGARPRTAPRDPAEGGPSHPREGLTD 454
P T+G A PR RAG RC + TA P P + PS R G D
Sbjct: 59 PGTSGSALPRPARAGFPPRCPLSHASTAAPFPTQPPFPSSLPLPSSTRFGQPD 111
>12_02_0459 + 19267426-19267792,19268691-19268779
Length = 151
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/43 (41%), Positives = 20/43 (46%)
Frame = -1
Query: 613 KRAAGHSGGCXAPSAASRNVSSMPQPDGRGAPADSAARSGGGW 485
+RAA GG A +A S P PD G A AA G GW
Sbjct: 24 RRAATGGGGQWAAAAVS------PPPDPAGGEAQQAAAGGDGW 60
>06_03_0186 -
17653101-17653205,17653594-17653660,17654744-17654898,
17655759-17655995
Length = 187
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = -1
Query: 568 ASRNVSSMPQPD-GRGAPADSAARSGGGWTLPSP*RSDRPK 449
A+ SS+P P G GA + SGGG P+ R RP+
Sbjct: 32 AAMRASSLPDPAAGAGAAGGGSGESGGGAANPAQARRRRPR 72
>04_04_1049 +
30414545-30414596,30414732-30414853,30415121-30415198,
30415329-30415459,30415644-30417552,30417797-30417836,
30418194-30418259,30418583-30418734
Length = 849
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/41 (41%), Positives = 19/41 (46%)
Frame = -2
Query: 576 RQPRAGTSARCRSQTAGARPRTAPRDPAEGGPSHPREGLTD 454
R+P + R R GA P APR AE G S R G D
Sbjct: 173 REPSSAVQERGRGLHRGASPPAAPRVGAEDGSSTRRLGRMD 213
>02_04_0171 + 20581995-20582354,20582509-20583141,20584954-20585058
Length = 365
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 4/50 (8%)
Frame = -1
Query: 607 AAGHSGGCXAPSAASRNVSSMPQPDGRGA----PADSAARSGGGWTLPSP 470
A G S A +A + V +PQ RGA P A G W LP+P
Sbjct: 193 AVGSSSSSAAAAARANTVVPVPQRAARGATAPTPRPVAPPQAGTWPLPAP 242
>08_02_0588 + 19036509-19039235
Length = 908
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +3
Query: 480 RVHPPPDRAALSAGAPLPSGCG 545
R PPP R+A+S+ LP GCG
Sbjct: 320 RSPPPPKRSAVSSVRQLPPGCG 341
>11_06_0232 + 21559467-21559532,21559586-21560200
Length = 226
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -1
Query: 607 AAGHSGGCXAPSAASRNVSSMPQPDGRGAPADS 509
A+ H GG +AA V+ P+ RGAPA S
Sbjct: 123 ASVHPGGAKRQAAAGTTVTPRPRARTRGAPASS 155
>02_05_1316 -
35679456-35679538,35679660-35679722,35679824-35679938,
35680271-35680372,35680667-35680736,35681182-35681273,
35681542-35681622,35681697-35681740,35681829-35681976
Length = 265
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = -2
Query: 606 PPATAGGAXPRQPRAGTSARCRSQTAGARPRTAPRD 499
PPA+ PR+PRA S+ RP+ P D
Sbjct: 11 PPASVAAPPPRRPRAVASSASSPALQRRRPQNVPGD 46
>02_03_0261 - 17011667-17012191
Length = 174
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -1
Query: 589 GCXAPSAASRNVSSMPQPDGRGAPADSAARSGGGW 485
G PS R+ S+ +P APA SAA GGW
Sbjct: 112 GVGPPSWVDRSASTPGEP-AASAPAASAAADSGGW 145
>05_02_0037 + 5883285-5884292
Length = 335
Score = 28.7 bits (61), Expect = 3.9
Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 5/62 (8%)
Frame = -1
Query: 595 SGGCXAPSAASRNVSSMPQPDGRGAPADSAARSGGGWTL-----PSP*RSDRPKLM*CQC 431
SG PSA ++ P +G+ A A + GGW L PSP P+ C C
Sbjct: 263 SGEITNPSAVFPTEAAAPATEGKEAAKSPDAAAQGGWCLFRCCWPSPPSVWWPR---CGC 319
Query: 430 GG 425
GG
Sbjct: 320 GG 321
>03_02_0330 + 7502593-7504956,7505020-7506312,7522011-7522235
Length = 1293
Score = 28.7 bits (61), Expect = 3.9
Identities = 20/49 (40%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Frame = -2
Query: 612 REPPATAGG--AXPRQPRAGTSARCRSQTAGARPRTAPRDPAEGGPSHP 472
R P A AG A P+ P A TAG RPR +P DP G P
Sbjct: 1179 RPPTAGAGPPPACPKVPGAPDPQDGHGATAG-RPRLSPSDPEAGHEGAP 1226
>02_04_0243 +
21244743-21245837,21245921-21246148,21246240-21246458,
21246557-21247000,21247440-21247547,21247790-21247909
Length = 737
Score = 28.7 bits (61), Expect = 3.9
Identities = 18/66 (27%), Positives = 26/66 (39%)
Frame = +3
Query: 324 LCRSRPGSNIGWEDKIL*TTSACTGTQGKPEENIPPHWHYISFGLSDLHGDGRVHPPPDR 503
L + P + G +K + + G E+ + H I DLHG RV PD
Sbjct: 655 LSAAAPATGFGGRNKRIHYSGPLVPPGGNMEDMLREHERQIQQAGDDLHGWRRVERRPDE 714
Query: 504 AALSAG 521
+S G
Sbjct: 715 VKISDG 720
>01_04_0112 - 16127785-16128279,16128883-16128986,16129304-16129454
Length = 249
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +2
Query: 383 ISMYRNPGXTGGKYTTTLALHQFRSVRPSRGWEGPPSAGSRGAVRGRAPAV 535
+S+ +PG G A R+ R SR W GP ++ RGA + R V
Sbjct: 15 LSIRSDPGRPHGGPARAGATRVRRNPRFSRTWAGPEASPLRGAAKKRRKRV 65
>09_06_0176 + 21351884-21352693,21352821-21352976,21353425-21353613,
21354741-21356354,21356446-21356553,21356649-21357509,
21357586-21357632,21358591-21358697,21359512-21359630,
21359706-21359915,21360412-21360693,21360820-21360952,
21361256-21361413,21362564-21362647,21362949-21363035
Length = 1654
Score = 28.3 bits (60), Expect = 5.1
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = +2
Query: 41 IDLIIDSMNYAETK*IVNNIAMSCPSGPRAPHSSGVPCNSALSFVASAQRVHGPENDACK 220
ID I+ ++N A +N A+ CP+ P AP S + L V A + +NDA
Sbjct: 1028 IDEILPNVNDALDNNSADNDAI-CPNVPDAPDSDAANIDEILPNVDDALDDNSADNDAIC 1086
Query: 221 PQ--DAKQS 241
P DA S
Sbjct: 1087 PNVPDASDS 1095
>04_03_0041 + 10046063-10046170,10046284-10046742
Length = 188
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = -2
Query: 615 AREPPATAGGAXPRQ-PRAGTSARCRSQTAGARPRTAPRDPAEGGPSHPR 469
A +P A A P++ P AGT + + A+P+ +P A+ P R
Sbjct: 126 AAKPKKDAAAAKPKKAPAAGTKRKAPEKKVVAKPKKSPAAKAKAKPKTVR 175
>03_02_0256 + 6899424-6899876,6900084-6900163,6900475-6900820
Length = 292
Score = 28.3 bits (60), Expect = 5.1
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 7/47 (14%)
Frame = -1
Query: 607 AAGHSGGCXAPSAASR-------NVSSMPQPDGRGAPADSAARSGGG 488
AA H GGC PS +S+ S+P GA A + A + GG
Sbjct: 31 AAAHRGGCRRPSPSSQCPPLEPSLTLSLPDDAAAGAAATATATASGG 77
>03_02_0229 +
6594931-6595030,6595573-6595826,6595935-6596061,
6596197-6596470,6596616-6596748,6596898-6596984,
6597067-6597186
Length = 364
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -2
Query: 570 PRAGTSARCRSQTAGARPRTAPRDPAEGGPSHPREG 463
PRA + +R R T + PR P GP+ PR G
Sbjct: 14 PRAASRSRSRRPTPATQYNAGPRKPR--GPNAPRSG 47
>02_02_0240 + 8196140-8198248,8198381-8198650
Length = 792
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 3/28 (10%)
Frame = -1
Query: 577 PSAASRNVSSMPQPDGRGA---PADSAA 503
PSAA+ + P+PD GA PADSAA
Sbjct: 112 PSAAASAADAAPEPDESGAAPPPADSAA 139
>01_06_0784 +
31979670-31979976,31980092-31980337,31980428-31980544,
31980638-31980792,31980910-31980984,31981080-31981346,
31981436-31981756,31981858-31982271
Length = 633
Score = 28.3 bits (60), Expect = 5.1
Identities = 17/43 (39%), Positives = 20/43 (46%)
Frame = -1
Query: 607 AAGHSGGCXAPSAASRNVSSMPQPDGRGAPADSAARSGGGWTL 479
AA G ++ R SM +GRG PAD GGG TL
Sbjct: 114 AASGGGSLLERRSSVRRSQSMVSEEGRGTPADEDL--GGGGTL 154
>01_06_0565 +
30287253-30287502,30287522-30289010,30289133-30289277,
30289679-30289729
Length = 644
Score = 28.3 bits (60), Expect = 5.1
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Frame = -2
Query: 606 PPATAGGAXPRQPRAGTSARCRSQ--TAGARPRTAPRDPAEG-GPSHPREGLTDRN*CSA 436
PP + G P P +GTS + + P +AP P+ G P+ P G + C+A
Sbjct: 380 PPTPSVGDVPPSPASGTSPSTPGSGGYSPSTPCSAPPSPSSGTSPTTPGGGYSPSTPCNA 439
>01_03_0027 + 11775591-11776046
Length = 151
Score = 28.3 bits (60), Expect = 5.1
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +2
Query: 119 GPRAPHSSGVPCNSALSFVASAQRVHGPENDACKPQD-AKQSEQLVPVAPAG 271
G RAP S+G P S+ S V S ++V GP K +++ V +PAG
Sbjct: 36 GVRAP-SNGAPAFSSNSLVMSVRKVAGPSKMIEKTSTVTEETATSVKASPAG 86
>01_03_0012 +
11638363-11638476,11638854-11640678,11641855-11642096,
11642198-11642327,11642464-11642774
Length = 873
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +3
Query: 333 SRPGSNIGWEDKIL*TTSACTGTQGKPEENIPPHWH 440
++PG+ + WE ++ SA G + E+ +PP H
Sbjct: 776 AQPGTPLSWEQRVKIALSAAKGLEFLHEKAVPPVIH 811
>08_02_0590 +
19044193-19044364,19044464-19045047,19045085-19046059,
19046219-19046605
Length = 705
Score = 27.9 bits (59), Expect = 6.8
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +3
Query: 489 PPPDRAALSAGAPLPSGCG 545
PPP R A+SA P GCG
Sbjct: 181 PPPKRRAVSAVRQFPPGCG 199
>06_03_0969 - 26413534-26413594,26415020-26415318
Length = 119
Score = 27.9 bits (59), Expect = 6.8
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = -2
Query: 600 ATAGGAXPRQPRAGTSARCRSQTAGARPRTAPRDPAEGGPS 478
A AGG Q +AR RS+ A A R R A+G P+
Sbjct: 18 ALAGGDEAAQGSPAAAARRRSRAARATARWRSRAAAQGSPA 58
>05_04_0144 + 18389877-18390431
Length = 184
Score = 27.9 bits (59), Expect = 6.8
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 5/50 (10%)
Frame = -2
Query: 594 AGGAXPRQP--RAGTSARCRSQTAGA---RPRTAPRDPAEGGPSHPREGL 460
+GG P +P R G R R + G R R +P D A GGP R G+
Sbjct: 15 SGGRRPARPARRHGGGGRRRHRRCGGGGWRWRCSPMDLAAGGPRDRRGGV 64
>01_06_0924 -
33058194-33058697,33058798-33060147,33060234-33060303,
33060918-33060976
Length = 660
Score = 27.9 bits (59), Expect = 6.8
Identities = 19/50 (38%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Frame = -2
Query: 600 ATAGGAXPRQPRAGTSARCRSQTAGARPRTAPRDPAEG-GPSHPREGLTD 454
A AGG QP G SA A A A + EG G P E +TD
Sbjct: 559 AAAGGDGAPQPHPGGSAIVPKGAAAAGQSDADAEADEGKGKELPAEAITD 608
>01_06_0243 + 27833497-27834042,27834144-27834238,27834400-27835567
Length = 602
Score = 27.9 bits (59), Expect = 6.8
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = -1
Query: 607 AAGHSGGCXAPSAASRNVSSMPQPDGRGAPADSAARSGGGWTLPS 473
AAG GG A R+ S D P D++A GGW L S
Sbjct: 69 AAG-PGGSGLSKAPPRSAPSKVALDSLKLPVDTSAGFAGGWNLVS 112
>10_08_0799 -
20650799-20650947,20651022-20651114,20651906-20651934,
20652039-20652097,20652170-20652283,20652374-20652534,
20652544-20652663,20652741-20653469,20654980-20655244
Length = 572
Score = 27.5 bits (58), Expect = 8.9
Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Frame = -1
Query: 610 RAAGHSGGCXAPSAASRNVSSMPQ---PDGRGAPADSAARSGGGWTLPS 473
R AG G AP+AAS S+ P DG G+ +G T PS
Sbjct: 100 RGAGPPAGSAAPAAASPQASAAPSSGPTDGLGSLFPGLGGTGTAGTRPS 148
>08_02_0592 +
19064025-19066596,19067036-19067084,19068530-19068605,
19068767-19068922
Length = 950
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +3
Query: 489 PPPDRAALSAGAPLPSGCG 545
PPP R A+SA P GCG
Sbjct: 132 PPPKRRAVSAIRQFPPGCG 150
>06_01_0500 + 3584743-3585516
Length = 257
Score = 27.5 bits (58), Expect = 8.9
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = -2
Query: 615 AREPPATAGGAXPRQPRAGTSARCRSQTAGARPRTAPRDPAEGGPSHP 472
A+ A+A A TSARC S TAG P A +G P P
Sbjct: 196 AQRGAASATALVTTAVAAATSARCHSTTAGRDPGAA-TCVVDGAPPPP 242
>04_04_0409 +
24992944-24993421,24993920-24994000,24994400-24994622,
24994709-24994850,24995166-24995555
Length = 437
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = -2
Query: 612 REPPATAGGAXPRQPRAGTSARCRSQTAGARPRTAP-RDPA 493
R PA+ GG AG+ R S T G +P P RD A
Sbjct: 9 RLSPASGGGGDSEPRSAGSRTRSVSATRGRKPSPRPGRDAA 49
>01_05_0393 - 21732178-21732287,21732875-21733436
Length = 223
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = +2
Query: 206 NDACKPQDAKQSEQL--VPVAPAGLKALCDACSQLYPDQPNP 325
+D+ P A +E L V P G +A+C AC+ PNP
Sbjct: 62 SDSDVPSCAVCTEPLEWAAVGPCGHRAVCSACAARVRSAPNP 103
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,550,116
Number of Sequences: 37544
Number of extensions: 467466
Number of successful extensions: 2215
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 2057
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2211
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1478421500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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