Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_F11
         (616 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr...    27   0.48 
AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22...    27   0.48 
AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein p...    25   1.5  
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    25   1.9  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    25   2.6  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    24   3.4  
CR954257-15|CAJ14166.1|  271|Anopheles gambiae predicted protein...    23   5.9  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    23   7.8  

>AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine
           protease protein.
          Length = 1322

 Score = 27.1 bits (57), Expect = 0.48
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -2

Query: 336 VTCRGLGWSGYSWEQASHNAFKPAG 262
           V CR LG++G + E  SH+ F P G
Sbjct: 803 VVCRELGFAGGAIEIKSHSYFPPNG 827



 Score = 23.0 bits (47), Expect = 7.8
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +3

Query: 339  PGSNIGWEDKIL*TTSACTGTQGKPEENIPPHWHY 443
            PG    W D++     AC GT+   E+ +  HWH+
Sbjct: 983  PGVGQIWLDQV-----ACNGTEPSIEDCV--HWHW 1010


>AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D
           protein.
          Length = 1322

 Score = 27.1 bits (57), Expect = 0.48
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -2

Query: 336 VTCRGLGWSGYSWEQASHNAFKPAG 262
           V CR LG++G + E  SH+ F P G
Sbjct: 802 VVCRELGFAGGAIEIKSHSYFPPNG 826



 Score = 23.0 bits (47), Expect = 7.8
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +3

Query: 339  PGSNIGWEDKIL*TTSACTGTQGKPEENIPPHWHY 443
            PG    W D++     AC GT+   E+ +  HWH+
Sbjct: 983  PGVGQIWLDQV-----ACNGTEPSIEDCV--HWHW 1010


>AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein
           protein.
          Length = 499

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +2

Query: 110 CPSGPRAPHSSGVPCNSA 163
           CP G  A HSSG  C +A
Sbjct: 475 CPDGSNAHHSSGAFCPAA 492


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 17/43 (39%), Positives = 21/43 (48%)
 Frame = +2

Query: 416 GKYTTTLALHQFRSVRPSRGWEGPPSAGSRGAVRGRAPAVWLR 544
           GKY + L LH+  SV      EG  SA  RG  +  A A + R
Sbjct: 755 GKYESNLLLHEPHSVGNVTATEGAVSA--RGRAKALADADFTR 795


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 14/53 (26%), Positives = 19/53 (35%)
 Frame = -2

Query: 606 PPATAGGAXPRQPRAGTSARCRSQTAGARPRTAPRDPAEGGPSHPREGLTDRN 448
           P A+A G   R P        + Q     P       +  GP HP + L + N
Sbjct: 678 PSASAAGLTTRSPPIELHELQQQQQQNGGPTATIMMISTAGPHHPHDLLIEEN 730


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
 Frame = +2

Query: 266 AGL-KALCDACSQLYPDQPNPLQVTTRLKYW 355
           AGL  A+ DAC  +    PN LQ   R  YW
Sbjct: 282 AGLVDAMVDACDIVMQRAPNVLQHQHRDVYW 312


>CR954257-15|CAJ14166.1|  271|Anopheles gambiae predicted protein
           protein.
          Length = 271

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -1

Query: 514 DSAARSGGGWTLPSP*RSDRPKLM 443
           D+ +   GGW  P   RS RP  M
Sbjct: 48  DTLSEFAGGWYTPRLRRSSRPSSM 71


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 14/46 (30%), Positives = 21/46 (45%)
 Frame = -1

Query: 607 AAGHSGGCXAPSAASRNVSSMPQPDGRGAPADSAARSGGGWTLPSP 470
           +AG +    A +AA       P PDG G+ +  +  S    T P+P
Sbjct: 747 SAGDARSGVAVAAALNTGGGGPPPDGSGSGSRCSKPSVTSTTPPTP 792


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 652,116
Number of Sequences: 2352
Number of extensions: 15707
Number of successful extensions: 34
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60132501
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)