Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_F11
(616 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC013291-1|AAH13291.1| 484|Homo sapiens suppressor of fused hom... 82 2e-15
AY358550-1|AAQ88914.1| 433|Homo sapiens SUFU protein. 82 2e-15
AY081829-1|AAM08947.1| 484|Homo sapiens suppressor of fused pro... 82 2e-15
AL391121-7|CAI40865.1| 484|Homo sapiens suppressor of fused hom... 82 2e-15
AL391121-6|CAI40864.1| 433|Homo sapiens suppressor of fused hom... 82 2e-15
AL157386-5|CAI39615.1| 484|Homo sapiens suppressor of fused hom... 82 2e-15
AL157386-4|CAI39614.1| 433|Homo sapiens suppressor of fused hom... 82 2e-15
AL121928-15|CAI12527.1| 105|Homo sapiens suppressor of fused ho... 82 2e-15
AL121928-14|CAI12526.1| 484|Homo sapiens suppressor of fused ho... 82 2e-15
AL121928-13|CAI12525.1| 433|Homo sapiens suppressor of fused ho... 82 2e-15
AF222345-1|AAF35866.1| 481|Homo sapiens suppressor of fused var... 82 2e-15
AF175770-1|AAD50501.1| 484|Homo sapiens suppressor of fused pro... 82 2e-15
AF172319-1|AAD51655.1| 482|Homo sapiens suppressor of fused pro... 82 2e-15
AF159447-1|AAF23893.1| 484|Homo sapiens Suppressor of Fused pro... 82 2e-15
AF144231-1|AAF23890.1| 433|Homo sapiens Suppressor of Fused pro... 82 2e-15
AL365453-1|CAB97009.1| 202|Homo sapiens 8D6 antigen protein. 27 0.25
BC018935-1|AAH18935.2| 689|Homo sapiens bin3, bicoid-interactin... 34 0.46
BC000556-1|AAH00556.2| 689|Homo sapiens bin3, bicoid-interactin... 34 0.46
AB065462-1|BAC05721.1| 964|Homo sapiens seven transmembrane hel... 34 0.46
D84361-1|BAA12322.1| 594|Homo sapiens p64 isoform of N-Shc prot... 31 2.4
BC026314-1|AAH26314.1| 594|Homo sapiens SHC (Src homology 2 dom... 31 2.4
AL353150-2|CAI16865.1| 594|Homo sapiens SHC (Src homology 2 dom... 31 2.4
AL160054-4|CAI41366.1| 594|Homo sapiens SHC (Src homology 2 dom... 31 2.4
AJ405674-1|CAC03787.1| 76|Homo sapiens T-cell receptor beta ch... 31 3.2
AB046863-1|BAB13469.1| 993|Homo sapiens KIAA1643 protein protein. 31 3.2
BC139920-1|AAI39921.1| 407|Homo sapiens CHIA protein protein. 30 7.5
BC139901-1|AAI39902.1| 407|Homo sapiens CHIA protein protein. 30 7.5
BC114521-1|AAI14522.1| 474|Homo sapiens SEMA6C protein protein. 30 7.5
BC106910-1|AAI06911.1| 368|Homo sapiens chitinase, acidic protein. 30 7.5
BC047336-1|AAH47336.2| 368|Homo sapiens chitinase, acidic protein. 30 7.5
BC036339-1|AAH36339.2| 368|Homo sapiens chitinase, acidic protein. 30 7.5
AY911311-1|AAX81434.1| 315|Homo sapiens chitinase family protei... 30 7.5
AY911310-1|AAX81433.1| 315|Homo sapiens chitinase family protei... 30 7.5
AY825504-1|AAX54833.1| 430|Homo sapiens chitinase family protei... 30 7.5
AY789445-1|AAX81432.1| 315|Homo sapiens chitinase family protei... 30 7.5
AY789444-1|AAX81431.1| 368|Homo sapiens chitinase family protei... 30 7.5
AL513202-5|CAH70804.1| 405|Homo sapiens eosinophil chemotactic ... 30 7.5
AL513202-4|CAH70803.1| 476|Homo sapiens eosinophil chemotactic ... 30 7.5
AL513202-3|CAH70802.1| 420|Homo sapiens eosinophil chemotactic ... 30 7.5
AL356387-9|CAI19266.1| 405|Homo sapiens eosinophil chemotactic ... 30 7.5
AL356387-8|CAI19265.1| 476|Homo sapiens eosinophil chemotactic ... 30 7.5
AL356387-6|CAI19263.1| 420|Homo sapiens eosinophil chemotactic ... 30 7.5
AF290004-1|AAG60019.1| 476|Homo sapiens acidic mammalian chitin... 30 7.5
AB025009-1|BAA86981.1| 315|Homo sapiens novel member of chitina... 30 7.5
AB025008-1|BAA86980.1| 368|Homo sapiens novel member of chitina... 30 7.5
Y11354-1|CAA72189.1| 1083|Homo sapiens subunit of RNA polymerase... 29 9.9
U41069-1|AAC17464.1| 537|Homo sapiens collagen alpha2(XI) protein. 29 9.9
U32169-3|AAC50215.1| 1629|Homo sapiens Pro-a2(XI) protein. 29 9.9
U32169-2|AAC50213.1| 1650|Homo sapiens Pro-a2(XI) protein. 29 9.9
U32169-1|AAC50214.1| 1736|Homo sapiens Pro-a2(XI) protein. 29 9.9
L18987-1|AAA35498.1| 663|Homo sapiens alpha-2 type XI collagen ... 29 9.9
DQ120650-1|ABB92435.1| 384|Homo sapiens RBM1 protein. 29 9.9
BX248309-2|CAM26006.1| 596|Homo sapiens collagen, type XI, alph... 29 9.9
BX248309-1|CAM26005.1| 1622|Homo sapiens collagen, type XI, alph... 29 9.9
BC037582-1|AAH37582.1| 349|Homo sapiens ATXN7L2 protein protein. 29 9.9
BC012942-1|AAH12942.1| 390|Homo sapiens RNA binding motif prote... 29 9.9
AY623115-1|AAT38111.1| 1085|Homo sapiens TAF4 RNA polymerase II,... 29 9.9
AL845446-3|CAI95551.1| 1650|Homo sapiens collagen, type XI, alph... 29 9.9
AL844527-6|CAI41834.1| 1650|Homo sapiens collagen, type XI, alph... 29 9.9
AL844527-4|CAM25783.1| 624|Homo sapiens collagen, type XI, alph... 29 9.9
AL662824-17|CAM24941.1| 624|Homo sapiens collagen, type XI, alp... 29 9.9
AL662824-16|CAI17611.2| 1650|Homo sapiens collagen, type XI, alp... 29 9.9
AL645940-3|CAM25429.1| 624|Homo sapiens collagen type XI alpha ... 29 9.9
AL645940-2|CAI18063.2| 1650|Homo sapiens collagen type XI alpha ... 29 9.9
AL355145-2|CAI22938.1| 349|Homo sapiens ataxin 7-like 2 protein. 29 9.9
AL355145-1|CAI22937.1| 722|Homo sapiens ataxin 7-like 2 protein. 29 9.9
AL139416-2|CAI21693.1| 390|Homo sapiens RNA binding motif prote... 29 9.9
AL139410-3|CAI12718.1| 902|Homo sapiens RUN and SH3 domain cont... 29 9.9
AL139410-2|CAI12719.1| 796|Homo sapiens RUN and SH3 domain cont... 29 9.9
AL137077-2|CAI11045.1| 1085|Homo sapiens TAF4 RNA polymerase II,... 29 9.9
AL109911-2|CAI19182.1| 1085|Homo sapiens TAF4 RNA polymerase II,... 29 9.9
AL031228-16|CAA20240.1| 1736|Homo sapiens collagen type XI alpha... 29 9.9
AL031228-15|CAI95623.1| 1650|Homo sapiens collagen type XI alpha... 29 9.9
AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator su... 29 9.9
AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein. 29 9.9
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 29 9.9
AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein pro... 29 9.9
AB016090-1|BAA83716.1| 802|Homo sapiens RNA binding protein pro... 29 9.9
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 29 9.9
>BC013291-1|AAH13291.1| 484|Homo sapiens suppressor of fused
homolog (Drosophila) protein.
Length = 484
Score = 81.8 bits (193), Expect = 2e-15
Identities = 34/48 (70%), Positives = 38/48 (79%)
Frame = +2
Query: 263 PAGLKALCDACSQLYPDQPNPLQVTTRLKYWLGGQDPLDYISMYRNPG 406
P GL A+ C +LYPDQPNPLQVT +KYWLGG DPLDY+SMYRN G
Sbjct: 31 PPGLHAIYGECRRLYPDQPNPLQVTAIVKYWLGGPDPLDYVSMYRNVG 78
Score = 66.9 bits (156), Expect = 5e-11
Identities = 33/54 (61%), Positives = 34/54 (62%)
Frame = +3
Query: 405 GKPEENIPPHWHYISFGLSDLHGDGRVHPPPDRAALSAGAPLPSGCGIELTFRL 566
G P NIP HWHYISFGLSDL+GD RVH G PSG G ELTFRL
Sbjct: 78 GSPSANIPEHWHYISFGLSDLYGDNRVHE-------FTGTDGPSGFGFELTFRL 124
>AY358550-1|AAQ88914.1| 433|Homo sapiens SUFU protein.
Length = 433
Score = 81.8 bits (193), Expect = 2e-15
Identities = 34/48 (70%), Positives = 38/48 (79%)
Frame = +2
Query: 263 PAGLKALCDACSQLYPDQPNPLQVTTRLKYWLGGQDPLDYISMYRNPG 406
P GL A+ C +LYPDQPNPLQVT +KYWLGG DPLDY+SMYRN G
Sbjct: 31 PPGLHAIYGECRRLYPDQPNPLQVTAIVKYWLGGPDPLDYVSMYRNVG 78
Score = 66.9 bits (156), Expect = 5e-11
Identities = 33/54 (61%), Positives = 34/54 (62%)
Frame = +3
Query: 405 GKPEENIPPHWHYISFGLSDLHGDGRVHPPPDRAALSAGAPLPSGCGIELTFRL 566
G P NIP HWHYISFGLSDL+GD RVH G PSG G ELTFRL
Sbjct: 78 GSPSANIPEHWHYISFGLSDLYGDNRVHE-------FTGTDGPSGFGFELTFRL 124
>AY081829-1|AAM08947.1| 484|Homo sapiens suppressor of fused
protein.
Length = 484
Score = 81.8 bits (193), Expect = 2e-15
Identities = 34/48 (70%), Positives = 38/48 (79%)
Frame = +2
Query: 263 PAGLKALCDACSQLYPDQPNPLQVTTRLKYWLGGQDPLDYISMYRNPG 406
P GL A+ C +LYPDQPNPLQVT +KYWLGG DPLDY+SMYRN G
Sbjct: 31 PPGLHAIYGECRRLYPDQPNPLQVTAIVKYWLGGPDPLDYVSMYRNVG 78
Score = 66.9 bits (156), Expect = 5e-11
Identities = 33/54 (61%), Positives = 34/54 (62%)
Frame = +3
Query: 405 GKPEENIPPHWHYISFGLSDLHGDGRVHPPPDRAALSAGAPLPSGCGIELTFRL 566
G P NIP HWHYISFGLSDL+GD RVH G PSG G ELTFRL
Sbjct: 78 GSPSANIPEHWHYISFGLSDLYGDNRVHE-------FTGTDGPSGFGFELTFRL 124
>AL391121-7|CAI40865.1| 484|Homo sapiens suppressor of fused
homolog (Drosophila) protein.
Length = 484
Score = 81.8 bits (193), Expect = 2e-15
Identities = 34/48 (70%), Positives = 38/48 (79%)
Frame = +2
Query: 263 PAGLKALCDACSQLYPDQPNPLQVTTRLKYWLGGQDPLDYISMYRNPG 406
P GL A+ C +LYPDQPNPLQVT +KYWLGG DPLDY+SMYRN G
Sbjct: 31 PPGLHAIYGECRRLYPDQPNPLQVTAIVKYWLGGPDPLDYVSMYRNVG 78
Score = 66.9 bits (156), Expect = 5e-11
Identities = 33/54 (61%), Positives = 34/54 (62%)
Frame = +3
Query: 405 GKPEENIPPHWHYISFGLSDLHGDGRVHPPPDRAALSAGAPLPSGCGIELTFRL 566
G P NIP HWHYISFGLSDL+GD RVH G PSG G ELTFRL
Sbjct: 78 GSPSANIPEHWHYISFGLSDLYGDNRVHE-------FTGTDGPSGFGFELTFRL 124
>AL391121-6|CAI40864.1| 433|Homo sapiens suppressor of fused
homolog (Drosophila) protein.
Length = 433
Score = 81.8 bits (193), Expect = 2e-15
Identities = 34/48 (70%), Positives = 38/48 (79%)
Frame = +2
Query: 263 PAGLKALCDACSQLYPDQPNPLQVTTRLKYWLGGQDPLDYISMYRNPG 406
P GL A+ C +LYPDQPNPLQVT +KYWLGG DPLDY+SMYRN G
Sbjct: 31 PPGLHAIYGECRRLYPDQPNPLQVTAIVKYWLGGPDPLDYVSMYRNVG 78
Score = 66.9 bits (156), Expect = 5e-11
Identities = 33/54 (61%), Positives = 34/54 (62%)
Frame = +3
Query: 405 GKPEENIPPHWHYISFGLSDLHGDGRVHPPPDRAALSAGAPLPSGCGIELTFRL 566
G P NIP HWHYISFGLSDL+GD RVH G PSG G ELTFRL
Sbjct: 78 GSPSANIPEHWHYISFGLSDLYGDNRVHE-------FTGTDGPSGFGFELTFRL 124
>AL157386-5|CAI39615.1| 484|Homo sapiens suppressor of fused
homolog (Drosophila) protein.
Length = 484
Score = 81.8 bits (193), Expect = 2e-15
Identities = 34/48 (70%), Positives = 38/48 (79%)
Frame = +2
Query: 263 PAGLKALCDACSQLYPDQPNPLQVTTRLKYWLGGQDPLDYISMYRNPG 406
P GL A+ C +LYPDQPNPLQVT +KYWLGG DPLDY+SMYRN G
Sbjct: 31 PPGLHAIYGECRRLYPDQPNPLQVTAIVKYWLGGPDPLDYVSMYRNVG 78
Score = 66.9 bits (156), Expect = 5e-11
Identities = 33/54 (61%), Positives = 34/54 (62%)
Frame = +3
Query: 405 GKPEENIPPHWHYISFGLSDLHGDGRVHPPPDRAALSAGAPLPSGCGIELTFRL 566
G P NIP HWHYISFGLSDL+GD RVH G PSG G ELTFRL
Sbjct: 78 GSPSANIPEHWHYISFGLSDLYGDNRVHE-------FTGTDGPSGFGFELTFRL 124
>AL157386-4|CAI39614.1| 433|Homo sapiens suppressor of fused
homolog (Drosophila) protein.
Length = 433
Score = 81.8 bits (193), Expect = 2e-15
Identities = 34/48 (70%), Positives = 38/48 (79%)
Frame = +2
Query: 263 PAGLKALCDACSQLYPDQPNPLQVTTRLKYWLGGQDPLDYISMYRNPG 406
P GL A+ C +LYPDQPNPLQVT +KYWLGG DPLDY+SMYRN G
Sbjct: 31 PPGLHAIYGECRRLYPDQPNPLQVTAIVKYWLGGPDPLDYVSMYRNVG 78
Score = 66.9 bits (156), Expect = 5e-11
Identities = 33/54 (61%), Positives = 34/54 (62%)
Frame = +3
Query: 405 GKPEENIPPHWHYISFGLSDLHGDGRVHPPPDRAALSAGAPLPSGCGIELTFRL 566
G P NIP HWHYISFGLSDL+GD RVH G PSG G ELTFRL
Sbjct: 78 GSPSANIPEHWHYISFGLSDLYGDNRVHE-------FTGTDGPSGFGFELTFRL 124
>AL121928-15|CAI12527.1| 105|Homo sapiens suppressor of fused
homolog (Drosophila) protein.
Length = 105
Score = 81.8 bits (193), Expect = 2e-15
Identities = 34/48 (70%), Positives = 38/48 (79%)
Frame = +2
Query: 263 PAGLKALCDACSQLYPDQPNPLQVTTRLKYWLGGQDPLDYISMYRNPG 406
P GL A+ C +LYPDQPNPLQVT +KYWLGG DPLDY+SMYRN G
Sbjct: 31 PPGLHAIYGECRRLYPDQPNPLQVTAIVKYWLGGPDPLDYVSMYRNVG 78
Score = 56.8 bits (131), Expect = 6e-08
Identities = 22/28 (78%), Positives = 23/28 (82%)
Frame = +3
Query: 405 GKPEENIPPHWHYISFGLSDLHGDGRVH 488
G P NIP HWHYISFGLSDL+GD RVH
Sbjct: 78 GSPSANIPEHWHYISFGLSDLYGDNRVH 105
>AL121928-14|CAI12526.1| 484|Homo sapiens suppressor of fused
homolog (Drosophila) protein.
Length = 484
Score = 81.8 bits (193), Expect = 2e-15
Identities = 34/48 (70%), Positives = 38/48 (79%)
Frame = +2
Query: 263 PAGLKALCDACSQLYPDQPNPLQVTTRLKYWLGGQDPLDYISMYRNPG 406
P GL A+ C +LYPDQPNPLQVT +KYWLGG DPLDY+SMYRN G
Sbjct: 31 PPGLHAIYGECRRLYPDQPNPLQVTAIVKYWLGGPDPLDYVSMYRNVG 78
Score = 66.9 bits (156), Expect = 5e-11
Identities = 33/54 (61%), Positives = 34/54 (62%)
Frame = +3
Query: 405 GKPEENIPPHWHYISFGLSDLHGDGRVHPPPDRAALSAGAPLPSGCGIELTFRL 566
G P NIP HWHYISFGLSDL+GD RVH G PSG G ELTFRL
Sbjct: 78 GSPSANIPEHWHYISFGLSDLYGDNRVHE-------FTGTDGPSGFGFELTFRL 124
>AL121928-13|CAI12525.1| 433|Homo sapiens suppressor of fused
homolog (Drosophila) protein.
Length = 433
Score = 81.8 bits (193), Expect = 2e-15
Identities = 34/48 (70%), Positives = 38/48 (79%)
Frame = +2
Query: 263 PAGLKALCDACSQLYPDQPNPLQVTTRLKYWLGGQDPLDYISMYRNPG 406
P GL A+ C +LYPDQPNPLQVT +KYWLGG DPLDY+SMYRN G
Sbjct: 31 PPGLHAIYGECRRLYPDQPNPLQVTAIVKYWLGGPDPLDYVSMYRNVG 78
Score = 66.9 bits (156), Expect = 5e-11
Identities = 33/54 (61%), Positives = 34/54 (62%)
Frame = +3
Query: 405 GKPEENIPPHWHYISFGLSDLHGDGRVHPPPDRAALSAGAPLPSGCGIELTFRL 566
G P NIP HWHYISFGLSDL+GD RVH G PSG G ELTFRL
Sbjct: 78 GSPSANIPEHWHYISFGLSDLYGDNRVHE-------FTGTDGPSGFGFELTFRL 124
>AF222345-1|AAF35866.1| 481|Homo sapiens suppressor of fused
variant 3 protein.
Length = 481
Score = 81.8 bits (193), Expect = 2e-15
Identities = 34/48 (70%), Positives = 38/48 (79%)
Frame = +2
Query: 263 PAGLKALCDACSQLYPDQPNPLQVTTRLKYWLGGQDPLDYISMYRNPG 406
P GL A+ C +LYPDQPNPLQVT +KYWLGG DPLDY+SMYRN G
Sbjct: 31 PPGLHAIYGECRRLYPDQPNPLQVTAIVKYWLGGPDPLDYVSMYRNVG 78
Score = 66.9 bits (156), Expect = 5e-11
Identities = 33/54 (61%), Positives = 34/54 (62%)
Frame = +3
Query: 405 GKPEENIPPHWHYISFGLSDLHGDGRVHPPPDRAALSAGAPLPSGCGIELTFRL 566
G P NIP HWHYISFGLSDL+GD RVH G PSG G ELTFRL
Sbjct: 78 GSPSANIPEHWHYISFGLSDLYGDNRVHE-------FTGTDGPSGFGFELTFRL 124
>AF175770-1|AAD50501.1| 484|Homo sapiens suppressor of fused
protein.
Length = 484
Score = 81.8 bits (193), Expect = 2e-15
Identities = 34/48 (70%), Positives = 38/48 (79%)
Frame = +2
Query: 263 PAGLKALCDACSQLYPDQPNPLQVTTRLKYWLGGQDPLDYISMYRNPG 406
P GL A+ C +LYPDQPNPLQVT +KYWLGG DPLDY+SMYRN G
Sbjct: 31 PPGLHAIYGECRRLYPDQPNPLQVTAIVKYWLGGPDPLDYVSMYRNVG 78
Score = 66.9 bits (156), Expect = 5e-11
Identities = 33/54 (61%), Positives = 34/54 (62%)
Frame = +3
Query: 405 GKPEENIPPHWHYISFGLSDLHGDGRVHPPPDRAALSAGAPLPSGCGIELTFRL 566
G P NIP HWHYISFGLSDL+GD RVH G PSG G ELTFRL
Sbjct: 78 GSPSANIPEHWHYISFGLSDLYGDNRVHE-------FTGTDGPSGFGFELTFRL 124
>AF172319-1|AAD51655.1| 482|Homo sapiens suppressor of fused
protein.
Length = 482
Score = 81.8 bits (193), Expect = 2e-15
Identities = 34/48 (70%), Positives = 38/48 (79%)
Frame = +2
Query: 263 PAGLKALCDACSQLYPDQPNPLQVTTRLKYWLGGQDPLDYISMYRNPG 406
P GL A+ C +LYPDQPNPLQVT +KYWLGG DPLDY+SMYRN G
Sbjct: 29 PPGLHAIYGECRRLYPDQPNPLQVTAIVKYWLGGPDPLDYVSMYRNVG 76
Score = 66.9 bits (156), Expect = 5e-11
Identities = 33/54 (61%), Positives = 34/54 (62%)
Frame = +3
Query: 405 GKPEENIPPHWHYISFGLSDLHGDGRVHPPPDRAALSAGAPLPSGCGIELTFRL 566
G P NIP HWHYISFGLSDL+GD RVH G PSG G ELTFRL
Sbjct: 76 GSPSANIPEHWHYISFGLSDLYGDNRVHE-------FTGTDGPSGFGFELTFRL 122
>AF159447-1|AAF23893.1| 484|Homo sapiens Suppressor of Fused
protein.
Length = 484
Score = 81.8 bits (193), Expect = 2e-15
Identities = 34/48 (70%), Positives = 38/48 (79%)
Frame = +2
Query: 263 PAGLKALCDACSQLYPDQPNPLQVTTRLKYWLGGQDPLDYISMYRNPG 406
P GL A+ C +LYPDQPNPLQVT +KYWLGG DPLDY+SMYRN G
Sbjct: 31 PPGLHAIYGECRRLYPDQPNPLQVTAIVKYWLGGPDPLDYVSMYRNVG 78
Score = 66.9 bits (156), Expect = 5e-11
Identities = 33/54 (61%), Positives = 34/54 (62%)
Frame = +3
Query: 405 GKPEENIPPHWHYISFGLSDLHGDGRVHPPPDRAALSAGAPLPSGCGIELTFRL 566
G P NIP HWHYISFGLSDL+GD RVH G PSG G ELTFRL
Sbjct: 78 GSPSANIPEHWHYISFGLSDLYGDNRVHE-------FTGTDGPSGFGFELTFRL 124
>AF144231-1|AAF23890.1| 433|Homo sapiens Suppressor of Fused
protein.
Length = 433
Score = 81.8 bits (193), Expect = 2e-15
Identities = 34/48 (70%), Positives = 38/48 (79%)
Frame = +2
Query: 263 PAGLKALCDACSQLYPDQPNPLQVTTRLKYWLGGQDPLDYISMYRNPG 406
P GL A+ C +LYPDQPNPLQVT +KYWLGG DPLDY+SMYRN G
Sbjct: 31 PPGLHAIYGECRRLYPDQPNPLQVTAIVKYWLGGPDPLDYVSMYRNVG 78
Score = 66.9 bits (156), Expect = 5e-11
Identities = 33/54 (61%), Positives = 34/54 (62%)
Frame = +3
Query: 405 GKPEENIPPHWHYISFGLSDLHGDGRVHPPPDRAALSAGAPLPSGCGIELTFRL 566
G P NIP HWHYISFGLSDL+GD RVH G PSG G ELTFRL
Sbjct: 78 GSPSANIPEHWHYISFGLSDLYGDNRVHE-------FTGTDGPSGFGFELTFRL 124
>AL365453-1|CAB97009.1| 202|Homo sapiens 8D6 antigen protein.
Length = 202
Score = 27.1 bits (57), Expect(2) = 0.25
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 477 GRVHPPPDRAALSAGAPLPSG 539
G HPPP A S GAP P+G
Sbjct: 74 GHRHPPPFVLAPSPGAPPPTG 94
Score = 26.6 bits (56), Expect(2) = 0.25
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = +3
Query: 294 VPSCTQTSLTLCRSRPGSNIGWEDKIL*TTSACTGTQGKPEENIPP 431
VPS ++ LCR RP W+ L +C G Q KP PP
Sbjct: 39 VPSVGNATILLCR-RPV----WKPNCLWGYCSCCGAQCKPGHRHPP 79
>BC018935-1|AAH18935.2| 689|Homo sapiens bin3, bicoid-interacting
3, homolog (Drosophila) protein.
Length = 689
Score = 33.9 bits (74), Expect = 0.46
Identities = 21/55 (38%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = -1
Query: 610 RAAGHSGGCXAPSAASRNVSSMPQPDGRGAPAD-SAARSGGGWTLPSP*RSDRPK 449
+A H GG P A S + + P GR AP D R GGG T P RP+
Sbjct: 81 QAQQHRGG--GPQAQSHGEARLSDPPGRAAPPDVGEERRGGGGTELGPPAPPRPR 133
>BC000556-1|AAH00556.2| 689|Homo sapiens bin3, bicoid-interacting
3, homolog (Drosophila) protein.
Length = 689
Score = 33.9 bits (74), Expect = 0.46
Identities = 21/55 (38%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = -1
Query: 610 RAAGHSGGCXAPSAASRNVSSMPQPDGRGAPAD-SAARSGGGWTLPSP*RSDRPK 449
+A H GG P A S + + P GR AP D R GGG T P RP+
Sbjct: 81 QAQQHRGG--GPQAQSHGEARLSDPPGRAAPPDVGEERRGGGGTELGPPAPPRPR 133
>AB065462-1|BAC05721.1| 964|Homo sapiens seven transmembrane helix
receptor protein.
Length = 964
Score = 33.9 bits (74), Expect = 0.46
Identities = 21/56 (37%), Positives = 23/56 (41%)
Frame = -2
Query: 615 AREPPATAGGAXPRQPRAGTSARCRSQTAGARPRTAPRDPAEGGPSHPREGLTDRN 448
A PPATA P S RCR GA PR AP P+ P G + N
Sbjct: 465 APPPPATAAAGYVSTPLPARS-RCRHWPRGAPPRPAPARPSPCPPPASATGFSHSN 519
>D84361-1|BAA12322.1| 594|Homo sapiens p64 isoform of N-Shc
protein.
Length = 594
Score = 31.5 bits (68), Expect = 2.4
Identities = 22/46 (47%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = -1
Query: 595 SGGCXAPSAASRNVSSMPQPDGRGAPADSAARSG--GGWTLPSP*R 464
SG C APS A+ + S+ P APA SAAR G G LP P R
Sbjct: 97 SGSCSAPSLAAPDGSA---PSAPRAPAMSAARKGRPGDEPLPRPPR 139
>BC026314-1|AAH26314.1| 594|Homo sapiens SHC (Src homology 2 domain
containing) transforming protein 3 protein.
Length = 594
Score = 31.5 bits (68), Expect = 2.4
Identities = 22/46 (47%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = -1
Query: 595 SGGCXAPSAASRNVSSMPQPDGRGAPADSAARSG--GGWTLPSP*R 464
SG C APS A+ + S+ P APA SAAR G G LP P R
Sbjct: 97 SGSCSAPSLAAPDGSA---PSAPRAPAMSAARKGRPGDEPLPRPPR 139
>AL353150-2|CAI16865.1| 594|Homo sapiens SHC (Src homology 2 domain
containing) transforming protein 3 protein.
Length = 594
Score = 31.5 bits (68), Expect = 2.4
Identities = 22/46 (47%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = -1
Query: 595 SGGCXAPSAASRNVSSMPQPDGRGAPADSAARSG--GGWTLPSP*R 464
SG C APS A+ + S+ P APA SAAR G G LP P R
Sbjct: 97 SGSCSAPSLAAPDGSA---PSAPRAPAMSAARKGRPGDEPLPRPPR 139
>AL160054-4|CAI41366.1| 594|Homo sapiens SHC (Src homology 2 domain
containing) transforming protein 3 protein.
Length = 594
Score = 31.5 bits (68), Expect = 2.4
Identities = 22/46 (47%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = -1
Query: 595 SGGCXAPSAASRNVSSMPQPDGRGAPADSAARSG--GGWTLPSP*R 464
SG C APS A+ + S+ P APA SAAR G G LP P R
Sbjct: 97 SGSCSAPSLAAPDGSA---PSAPRAPAMSAARKGRPGDEPLPRPPR 139
>AJ405674-1|CAC03787.1| 76|Homo sapiens T-cell receptor beta chain
protein.
Length = 76
Score = 31.1 bits (67), Expect = 3.2
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +3
Query: 297 PSCTQTSLTLCRSRPGSNIGW 359
PS QTSL C SRPG N G+
Sbjct: 53 PSPNQTSLYFCASRPGXNYGY 73
>AB046863-1|BAB13469.1| 993|Homo sapiens KIAA1643 protein protein.
Length = 993
Score = 31.1 bits (67), Expect = 3.2
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = -2
Query: 606 PPATAGGAXPRQPRAGTSARCRSQTAGARPRTAPRDPAEGGPSHPRE 466
PP + + R+P+A TS +C T+G++ TA E G + +E
Sbjct: 720 PPPSEDASNGREPKAPTSDKCLPHTSGSQVDTASGLQGEAGVAGQQE 766
>BC139920-1|AAI39921.1| 407|Homo sapiens CHIA protein protein.
Length = 407
Score = 29.9 bits (64), Expect = 7.5
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -1
Query: 613 KRAAG-HSGGCXAPSAASRNVSSMPQPDGRGAPADSAARSGGG 488
K+A G S C AP+ +++ P G G+ + S+ S GG
Sbjct: 315 KKALGLQSASCTAPAQPIEPITAAPSGSGNGSGSSSSGGSSGG 357
>BC139901-1|AAI39902.1| 407|Homo sapiens CHIA protein protein.
Length = 407
Score = 29.9 bits (64), Expect = 7.5
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -1
Query: 613 KRAAG-HSGGCXAPSAASRNVSSMPQPDGRGAPADSAARSGGG 488
K+A G S C AP+ +++ P G G+ + S+ S GG
Sbjct: 315 KKALGLQSASCTAPAQPIEPITAAPSGSGNGSGSSSSGGSSGG 357
>BC114521-1|AAI14522.1| 474|Homo sapiens SEMA6C protein protein.
Length = 474
Score = 29.9 bits (64), Expect = 7.5
Identities = 19/44 (43%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = -1
Query: 574 SAASRNVSSMPQPDGRGAPADS---AARSGGGWTLPSP*RSDRP 452
+A S S P+P GAP S A RS G +T PSP S P
Sbjct: 402 AAVSTFKGSGPRPPAWGAPESSRPRAGRSSGRFTAPSPRTSSLP 445
>BC106910-1|AAI06911.1| 368|Homo sapiens chitinase, acidic protein.
Length = 368
Score = 29.9 bits (64), Expect = 7.5
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -1
Query: 613 KRAAG-HSGGCXAPSAASRNVSSMPQPDGRGAPADSAARSGGG 488
K+A G S C AP+ +++ P G G+ + S+ S GG
Sbjct: 276 KKALGLQSASCTAPAQPIEPITAAPSGSGNGSGSSSSGGSSGG 318
>BC047336-1|AAH47336.2| 368|Homo sapiens chitinase, acidic protein.
Length = 368
Score = 29.9 bits (64), Expect = 7.5
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -1
Query: 613 KRAAG-HSGGCXAPSAASRNVSSMPQPDGRGAPADSAARSGGG 488
K+A G S C AP+ +++ P G G+ + S+ S GG
Sbjct: 276 KKALGLQSASCTAPAQPIEPITAAPSGSGNGSGSSSSGGSSGG 318
>BC036339-1|AAH36339.2| 368|Homo sapiens chitinase, acidic protein.
Length = 368
Score = 29.9 bits (64), Expect = 7.5
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -1
Query: 613 KRAAG-HSGGCXAPSAASRNVSSMPQPDGRGAPADSAARSGGG 488
K+A G S C AP+ +++ P G G+ + S+ S GG
Sbjct: 276 KKALGLQSASCTAPAQPIEPITAAPSGSGNGSGSSSSGGSSGG 318
>AY911311-1|AAX81434.1| 315|Homo sapiens chitinase family protein
V2 protein.
Length = 315
Score = 29.9 bits (64), Expect = 7.5
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -1
Query: 613 KRAAG-HSGGCXAPSAASRNVSSMPQPDGRGAPADSAARSGGG 488
K+A G S C AP+ +++ P G G+ + S+ S GG
Sbjct: 223 KKALGLQSASCTAPAQPIEPITAAPSGSGNGSGSSSSGGSSGG 265
>AY911310-1|AAX81433.1| 315|Homo sapiens chitinase family protein
V1 protein.
Length = 315
Score = 29.9 bits (64), Expect = 7.5
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -1
Query: 613 KRAAG-HSGGCXAPSAASRNVSSMPQPDGRGAPADSAARSGGG 488
K+A G S C AP+ +++ P G G+ + S+ S GG
Sbjct: 223 KKALGLQSASCTAPAQPIEPITAAPSGSGNGSGSSSSGGSSGG 265
>AY825504-1|AAX54833.1| 430|Homo sapiens chitinase family protein 3
protein.
Length = 430
Score = 29.9 bits (64), Expect = 7.5
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -1
Query: 613 KRAAG-HSGGCXAPSAASRNVSSMPQPDGRGAPADSAARSGGG 488
K+A G S C AP+ +++ P G G+ + S+ S GG
Sbjct: 338 KKALGLQSASCTAPAQPIEPITAAPSGSGNGSGSSSSGGSSGG 380
>AY789445-1|AAX81432.1| 315|Homo sapiens chitinase family protein 2
protein.
Length = 315
Score = 29.9 bits (64), Expect = 7.5
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -1
Query: 613 KRAAG-HSGGCXAPSAASRNVSSMPQPDGRGAPADSAARSGGG 488
K+A G S C AP+ +++ P G G+ + S+ S GG
Sbjct: 223 KKALGLQSASCTAPAQPIEPITAAPSGSGNGSGSSSSGGSSGG 265
>AY789444-1|AAX81431.1| 368|Homo sapiens chitinase family protein 1
protein.
Length = 368
Score = 29.9 bits (64), Expect = 7.5
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -1
Query: 613 KRAAG-HSGGCXAPSAASRNVSSMPQPDGRGAPADSAARSGGG 488
K+A G S C AP+ +++ P G G+ + S+ S GG
Sbjct: 276 KKALGLQSASCTAPAQPIEPITAAPSGSGNGSGSSSSGGSSGG 318
>AL513202-5|CAH70804.1| 405|Homo sapiens eosinophil chemotactic
cytokine (CHIA) protein.
Length = 405
Score = 29.9 bits (64), Expect = 7.5
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -1
Query: 613 KRAAG-HSGGCXAPSAASRNVSSMPQPDGRGAPADSAARSGGG 488
K+A G S C AP+ +++ P G G+ + S+ S GG
Sbjct: 313 KKALGLQSASCTAPAQPIEPITAAPSGSGNGSGSSSSGGSSGG 355
>AL513202-4|CAH70803.1| 476|Homo sapiens eosinophil chemotactic
cytokine (CHIA) protein.
Length = 476
Score = 29.9 bits (64), Expect = 7.5
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -1
Query: 613 KRAAG-HSGGCXAPSAASRNVSSMPQPDGRGAPADSAARSGGG 488
K+A G S C AP+ +++ P G G+ + S+ S GG
Sbjct: 384 KKALGLQSASCTAPAQPIEPITAAPSGSGNGSGSSSSGGSSGG 426
>AL513202-3|CAH70802.1| 420|Homo sapiens eosinophil chemotactic
cytokine (CHIA) protein.
Length = 420
Score = 29.9 bits (64), Expect = 7.5
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -1
Query: 613 KRAAG-HSGGCXAPSAASRNVSSMPQPDGRGAPADSAARSGGG 488
K+A G S C AP+ +++ P G G+ + S+ S GG
Sbjct: 328 KKALGLQSASCTAPAQPIEPITAAPSGSGNGSGSSSSGGSSGG 370
>AL356387-9|CAI19266.1| 405|Homo sapiens eosinophil chemotactic
cytokine (CHIA) protein.
Length = 405
Score = 29.9 bits (64), Expect = 7.5
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -1
Query: 613 KRAAG-HSGGCXAPSAASRNVSSMPQPDGRGAPADSAARSGGG 488
K+A G S C AP+ +++ P G G+ + S+ S GG
Sbjct: 313 KKALGLQSASCTAPAQPIEPITAAPSGSGNGSGSSSSGGSSGG 355
>AL356387-8|CAI19265.1| 476|Homo sapiens eosinophil chemotactic
cytokine (CHIA) protein.
Length = 476
Score = 29.9 bits (64), Expect = 7.5
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -1
Query: 613 KRAAG-HSGGCXAPSAASRNVSSMPQPDGRGAPADSAARSGGG 488
K+A G S C AP+ +++ P G G+ + S+ S GG
Sbjct: 384 KKALGLQSASCTAPAQPIEPITAAPSGSGNGSGSSSSGGSSGG 426
>AL356387-6|CAI19263.1| 420|Homo sapiens eosinophil chemotactic
cytokine (CHIA) protein.
Length = 420
Score = 29.9 bits (64), Expect = 7.5
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -1
Query: 613 KRAAG-HSGGCXAPSAASRNVSSMPQPDGRGAPADSAARSGGG 488
K+A G S C AP+ +++ P G G+ + S+ S GG
Sbjct: 328 KKALGLQSASCTAPAQPIEPITAAPSGSGNGSGSSSSGGSSGG 370
>AF290004-1|AAG60019.1| 476|Homo sapiens acidic mammalian chitinase
precursor protein.
Length = 476
Score = 29.9 bits (64), Expect = 7.5
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -1
Query: 613 KRAAG-HSGGCXAPSAASRNVSSMPQPDGRGAPADSAARSGGG 488
K+A G S C AP+ +++ P G G+ + S+ S GG
Sbjct: 384 KKALGLQSASCTAPAQPIEPITAAPSGSGNGSGSSSSGGSSGG 426
>AB025009-1|BAA86981.1| 315|Homo sapiens novel member of chitinase
family protein.
Length = 315
Score = 29.9 bits (64), Expect = 7.5
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -1
Query: 613 KRAAG-HSGGCXAPSAASRNVSSMPQPDGRGAPADSAARSGGG 488
K+A G S C AP+ +++ P G G+ + S+ S GG
Sbjct: 223 KKALGLQSASCTAPAQPIEPITAAPSGSGNGSGSSSSGGSSGG 265
>AB025008-1|BAA86980.1| 368|Homo sapiens novel member of chitinase
family protein.
Length = 368
Score = 29.9 bits (64), Expect = 7.5
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -1
Query: 613 KRAAG-HSGGCXAPSAASRNVSSMPQPDGRGAPADSAARSGGG 488
K+A G S C AP+ +++ P G G+ + S+ S GG
Sbjct: 276 KKALGLQSASCTAPAQPIEPITAAPSGSGNGSGSSSSGGSSGG 318
>Y11354-1|CAA72189.1| 1083|Homo sapiens subunit of RNA polymerase II
transcription factor protein.
Length = 1083
Score = 29.5 bits (63), Expect = 9.9
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = -2
Query: 603 PATAGGAXPRQPRAGTSARCRSQTAGARPRTAPRDPAEGGPSHPREGL 460
PA A GA P P G R R P GP PR L
Sbjct: 67 PAGAAGAGPAAPAEGAPGAAPEPPPAGRARPGGGGPQRPGPPSPRRPL 114
>U41069-1|AAC17464.1| 537|Homo sapiens collagen alpha2(XI) protein.
Length = 537
Score = 29.5 bits (63), Expect = 9.9
Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +3
Query: 471 GDGRVHPPPDRAAL--SAGAPLPSGCGIELTFRLAADG 578
GD PP RA L S GAP P G + L FR + G
Sbjct: 423 GDPGERGPPGRAGLPGSDGAPGPPGTSLMLPFRFGSGG 460
>U32169-3|AAC50215.1| 1629|Homo sapiens Pro-a2(XI) protein.
Length = 1629
Score = 29.5 bits (63), Expect = 9.9
Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +3
Query: 471 GDGRVHPPPDRAAL--SAGAPLPSGCGIELTFRLAADG 578
GD PP RA L S GAP P G + L FR + G
Sbjct: 316 GDPGERGPPGRAGLPGSDGAPGPPGTSLMLPFRFGSGG 353
>U32169-2|AAC50213.1| 1650|Homo sapiens Pro-a2(XI) protein.
Length = 1650
Score = 29.5 bits (63), Expect = 9.9
Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +3
Query: 471 GDGRVHPPPDRAAL--SAGAPLPSGCGIELTFRLAADG 578
GD PP RA L S GAP P G + L FR + G
Sbjct: 337 GDPGERGPPGRAGLPGSDGAPGPPGTSLMLPFRFGSGG 374
>U32169-1|AAC50214.1| 1736|Homo sapiens Pro-a2(XI) protein.
Length = 1736
Score = 29.5 bits (63), Expect = 9.9
Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +3
Query: 471 GDGRVHPPPDRAAL--SAGAPLPSGCGIELTFRLAADG 578
GD PP RA L S GAP P G + L FR + G
Sbjct: 423 GDPGERGPPGRAGLPGSDGAPGPPGTSLMLPFRFGSGG 460
>L18987-1|AAA35498.1| 663|Homo sapiens alpha-2 type XI collagen
protein.
Length = 663
Score = 29.5 bits (63), Expect = 9.9
Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +3
Query: 471 GDGRVHPPPDRAAL--SAGAPLPSGCGIELTFRLAADG 578
GD PP RA L S GAP P G + L FR + G
Sbjct: 279 GDPGERGPPGRAGLPGSDGAPGPPGTSLMLPFRFGSGG 316
>DQ120650-1|ABB92435.1| 384|Homo sapiens RBM1 protein.
Length = 384
Score = 29.5 bits (63), Expect = 9.9
Identities = 19/54 (35%), Positives = 24/54 (44%)
Frame = -2
Query: 612 REPPATAGGAXPRQPRAGTSARCRSQTAGARPRTAPRDPAEGGPSHPREGLTDR 451
R PP +GG P++ R S G P + RD + GGP RE L R
Sbjct: 151 RGPPPRSGGPSPKRSAPSGLVRSSSGMGGRAPLSRGRD-SYGGPPR-REPLPSR 202
>BX248309-2|CAM26006.1| 596|Homo sapiens collagen, type XI, alpha 2
protein.
Length = 596
Score = 29.5 bits (63), Expect = 9.9
Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +3
Query: 471 GDGRVHPPPDRAAL--SAGAPLPSGCGIELTFRLAADG 578
GD PP RA L S GAP P G + L FR + G
Sbjct: 395 GDPGERGPPGRAGLPGSDGAPGPPGTSLMLPFRFGSGG 432
>BX248309-1|CAM26005.1| 1622|Homo sapiens collagen, type XI, alpha 2
protein.
Length = 1622
Score = 29.5 bits (63), Expect = 9.9
Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +3
Query: 471 GDGRVHPPPDRAAL--SAGAPLPSGCGIELTFRLAADG 578
GD PP RA L S GAP P G + L FR + G
Sbjct: 309 GDPGERGPPGRAGLPGSDGAPGPPGTSLMLPFRFGSGG 346
>BC037582-1|AAH37582.1| 349|Homo sapiens ATXN7L2 protein protein.
Length = 349
Score = 29.5 bits (63), Expect = 9.9
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Frame = +2
Query: 113 PSGPRAPHSSGVPCNSALS--FVASAQRVHGPE-NDACKPQDAKQSEQLVPVAPAGLKAL 283
P+ H P ++ LS + R+ GP AC + LVP PAG ++
Sbjct: 84 PAAEPPAHLVNSPLSAPLSPSSTGTCPRLPGPTLRPACPASMPPTKDNLVPSYPAGSPSV 143
Query: 284 CDACSQ 301
ACSQ
Sbjct: 144 AAACSQ 149
>BC012942-1|AAH12942.1| 390|Homo sapiens RNA binding motif protein,
X-linked-like 1 protein.
Length = 390
Score = 29.5 bits (63), Expect = 9.9
Identities = 19/54 (35%), Positives = 24/54 (44%)
Frame = -2
Query: 612 REPPATAGGAXPRQPRAGTSARCRSQTAGARPRTAPRDPAEGGPSHPREGLTDR 451
R PP +GG P++ R S G P + RD + GGP RE L R
Sbjct: 151 RGPPPRSGGPSPKRSAPSGLVRSSSGMGGRAPLSRGRD-SYGGPPR-REPLPSR 202
>AY623115-1|AAT38111.1| 1085|Homo sapiens TAF4 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 135kD
protein.
Length = 1085
Score = 29.5 bits (63), Expect = 9.9
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = -2
Query: 603 PATAGGAXPRQPRAGTSARCRSQTAGARPRTAPRDPAEGGPSHPREGL 460
PA A GA P P G R R P GP PR L
Sbjct: 67 PAGAAGAGPAAPAEGAPGAAPEPPPAGRARPGGGGPQRPGPPSPRRPL 114
>AL845446-3|CAI95551.1| 1650|Homo sapiens collagen, type XI, alpha 2
protein.
Length = 1650
Score = 29.5 bits (63), Expect = 9.9
Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +3
Query: 471 GDGRVHPPPDRAAL--SAGAPLPSGCGIELTFRLAADG 578
GD PP RA L S GAP P G + L FR + G
Sbjct: 337 GDPGERGPPGRAGLPGSDGAPGPPGTSLMLPFRFGSGG 374
>AL844527-6|CAI41834.1| 1650|Homo sapiens collagen, type XI, alpha 2
protein.
Length = 1650
Score = 29.5 bits (63), Expect = 9.9
Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +3
Query: 471 GDGRVHPPPDRAAL--SAGAPLPSGCGIELTFRLAADG 578
GD PP RA L S GAP P G + L FR + G
Sbjct: 337 GDPGERGPPGRAGLPGSDGAPGPPGTSLMLPFRFGSGG 374
>AL844527-4|CAM25783.1| 624|Homo sapiens collagen, type XI, alpha 2
protein.
Length = 624
Score = 29.5 bits (63), Expect = 9.9
Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +3
Query: 471 GDGRVHPPPDRAAL--SAGAPLPSGCGIELTFRLAADG 578
GD PP RA L S GAP P G + L FR + G
Sbjct: 423 GDPGERGPPGRAGLPGSDGAPGPPGTSLMLPFRFGSGG 460
>AL662824-17|CAM24941.1| 624|Homo sapiens collagen, type XI, alpha
2 protein.
Length = 624
Score = 29.5 bits (63), Expect = 9.9
Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +3
Query: 471 GDGRVHPPPDRAAL--SAGAPLPSGCGIELTFRLAADG 578
GD PP RA L S GAP P G + L FR + G
Sbjct: 423 GDPGERGPPGRAGLPGSDGAPGPPGTSLMLPFRFGSGG 460
>AL662824-16|CAI17611.2| 1650|Homo sapiens collagen, type XI, alpha
2 protein.
Length = 1650
Score = 29.5 bits (63), Expect = 9.9
Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +3
Query: 471 GDGRVHPPPDRAAL--SAGAPLPSGCGIELTFRLAADG 578
GD PP RA L S GAP P G + L FR + G
Sbjct: 337 GDPGERGPPGRAGLPGSDGAPGPPGTSLMLPFRFGSGG 374
>AL645940-3|CAM25429.1| 624|Homo sapiens collagen type XI alpha 2
protein.
Length = 624
Score = 29.5 bits (63), Expect = 9.9
Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +3
Query: 471 GDGRVHPPPDRAAL--SAGAPLPSGCGIELTFRLAADG 578
GD PP RA L S GAP P G + L FR + G
Sbjct: 423 GDPGERGPPGRAGLPGSDGAPGPPGTSLMLPFRFGSGG 460
>AL645940-2|CAI18063.2| 1650|Homo sapiens collagen type XI alpha 2
protein.
Length = 1650
Score = 29.5 bits (63), Expect = 9.9
Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +3
Query: 471 GDGRVHPPPDRAAL--SAGAPLPSGCGIELTFRLAADG 578
GD PP RA L S GAP P G + L FR + G
Sbjct: 337 GDPGERGPPGRAGLPGSDGAPGPPGTSLMLPFRFGSGG 374
>AL355145-2|CAI22938.1| 349|Homo sapiens ataxin 7-like 2 protein.
Length = 349
Score = 29.5 bits (63), Expect = 9.9
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Frame = +2
Query: 113 PSGPRAPHSSGVPCNSALS--FVASAQRVHGPE-NDACKPQDAKQSEQLVPVAPAGLKAL 283
P+ H P ++ LS + R+ GP AC + LVP PAG ++
Sbjct: 84 PAAEPPAHLVNSPLSAPLSPSSTGTCPRLPGPTLRPACPASMPPTKDNLVPSYPAGSPSV 143
Query: 284 CDACSQ 301
ACSQ
Sbjct: 144 AAACSQ 149
>AL355145-1|CAI22937.1| 722|Homo sapiens ataxin 7-like 2 protein.
Length = 722
Score = 29.5 bits (63), Expect = 9.9
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Frame = +2
Query: 113 PSGPRAPHSSGVPCNSALS--FVASAQRVHGPE-NDACKPQDAKQSEQLVPVAPAGLKAL 283
P+ H P ++ LS + R+ GP AC + LVP PAG ++
Sbjct: 457 PAAEPPAHLVNSPLSAPLSPSSTGTCPRLPGPTLRPACPASMPPTKDNLVPSYPAGSPSV 516
Query: 284 CDACSQ 301
ACSQ
Sbjct: 517 AAACSQ 522
>AL139416-2|CAI21693.1| 390|Homo sapiens RNA binding motif protein,
X-linked-like 1 protein.
Length = 390
Score = 29.5 bits (63), Expect = 9.9
Identities = 19/54 (35%), Positives = 24/54 (44%)
Frame = -2
Query: 612 REPPATAGGAXPRQPRAGTSARCRSQTAGARPRTAPRDPAEGGPSHPREGLTDR 451
R PP +GG P++ R S G P + RD + GGP RE L R
Sbjct: 151 RGPPPRSGGPSPKRSAPSGLVRSSSGMGGRAPLSRGRD-SYGGPPR-REPLPSR 202
>AL139410-3|CAI12718.1| 902|Homo sapiens RUN and SH3 domain
containing 1 protein.
Length = 902
Score = 29.5 bits (63), Expect = 9.9
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +3
Query: 420 NIPPHWHYISFGLSDLHGDGRVHPPPDRAALSAGAPLPS 536
++ P +S L DL GD HP P L G+PL S
Sbjct: 111 DLSPDESPVSVYLRDLPGDEDAHPQPSIIPLEQGSPLAS 149
>AL139410-2|CAI12719.1| 796|Homo sapiens RUN and SH3 domain
containing 1 protein.
Length = 796
Score = 29.5 bits (63), Expect = 9.9
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +3
Query: 420 NIPPHWHYISFGLSDLHGDGRVHPPPDRAALSAGAPLPS 536
++ P +S L DL GD HP P L G+PL S
Sbjct: 111 DLSPDESPVSVYLRDLPGDEDAHPQPSIIPLEQGSPLAS 149
>AL137077-2|CAI11045.1| 1085|Homo sapiens TAF4 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 135kD
protein.
Length = 1085
Score = 29.5 bits (63), Expect = 9.9
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = -2
Query: 603 PATAGGAXPRQPRAGTSARCRSQTAGARPRTAPRDPAEGGPSHPREGL 460
PA A GA P P G R R P GP PR L
Sbjct: 67 PAGAAGAGPAAPAEGAPGAAPEPPPAGRARPGGGGPQRPGPPSPRRPL 114
>AL109911-2|CAI19182.1| 1085|Homo sapiens TAF4 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 135kD
protein.
Length = 1085
Score = 29.5 bits (63), Expect = 9.9
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = -2
Query: 603 PATAGGAXPRQPRAGTSARCRSQTAGARPRTAPRDPAEGGPSHPREGL 460
PA A GA P P G R R P GP PR L
Sbjct: 67 PAGAAGAGPAAPAEGAPGAAPEPPPAGRARPGGGGPQRPGPPSPRRPL 114
>AL031228-16|CAA20240.1| 1736|Homo sapiens collagen type XI alpha 2
protein.
Length = 1736
Score = 29.5 bits (63), Expect = 9.9
Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +3
Query: 471 GDGRVHPPPDRAAL--SAGAPLPSGCGIELTFRLAADG 578
GD PP RA L S GAP P G + L FR + G
Sbjct: 423 GDPGERGPPGRAGLPGSDGAPGPPGTSLMLPFRFGSGG 460
>AL031228-15|CAI95623.1| 1650|Homo sapiens collagen type XI alpha 2
protein.
Length = 1650
Score = 29.5 bits (63), Expect = 9.9
Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +3
Query: 471 GDGRVHPPPDRAAL--SAGAPLPSGCGIELTFRLAADG 578
GD PP RA L S GAP P G + L FR + G
Sbjct: 337 GDPGERGPPGRAGLPGSDGAPGPPGTSLMLPFRFGSGG 374
>AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator subunit
SRm300 protein.
Length = 2296
Score = 29.5 bits (63), Expect = 9.9
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = -2
Query: 609 EPPATAGGAXPRQPRAGTSARCRSQTAGARPRTAPRDPAEGGPSHPREGLTDR 451
EP A A A PR+ R+G+S++ G P E P HP + T R
Sbjct: 1623 EPKAPAPRALPRRSRSGSSSK------GRGPSPEGSSSTESSPEHPPKSRTAR 1669
>AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein.
Length = 1791
Score = 29.5 bits (63), Expect = 9.9
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = -2
Query: 609 EPPATAGGAXPRQPRAGTSARCRSQTAGARPRTAPRDPAEGGPSHPREGLTDR 451
EP A A A PR+ R+G+S++ G P E P HP + T R
Sbjct: 655 EPKAPAPRALPRRSRSGSSSK------GRGPSPEGSSSTESSPEHPPKSRTAR 701
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein protein.
Length = 2752
Score = 29.5 bits (63), Expect = 9.9
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = -2
Query: 609 EPPATAGGAXPRQPRAGTSARCRSQTAGARPRTAPRDPAEGGPSHPREGLTDR 451
EP A A A PR+ R+G+S++ G P E P HP + T R
Sbjct: 1623 EPKAPAPRALPRRSRSGSSSK------GRGPSPEGSSSTESSPEHPPKSRTAR 1669
>AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein
protein.
Length = 1275
Score = 29.5 bits (63), Expect = 9.9
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = -2
Query: 609 EPPATAGGAXPRQPRAGTSARCRSQTAGARPRTAPRDPAEGGPSHPREGLTDR 451
EP A A A PR+ R+G+S++ G P E P HP + T R
Sbjct: 146 EPKAPAPRALPRRSRSGSSSK------GRGPSPEGSSSTESSPEHPPKSRTAR 192
>AB016090-1|BAA83716.1| 802|Homo sapiens RNA binding protein
protein.
Length = 802
Score = 29.5 bits (63), Expect = 9.9
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = -2
Query: 609 EPPATAGGAXPRQPRAGTSARCRSQTAGARPRTAPRDPAEGGPSHPREGLTDR 451
EP A A A PR+ R+G+S++ G P E P HP + T R
Sbjct: 749 EPKAPAPRALPRRSRSGSSSK------GRGPSPEGSSSTESSPEHPPKSRTAR 795
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 29.5 bits (63), Expect = 9.9
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = -2
Query: 609 EPPATAGGAXPRQPRAGTSARCRSQTAGARPRTAPRDPAEGGPSHPREGLTDR 451
EP A A A PR+ R+G+S++ G P E P HP + T R
Sbjct: 1671 EPKAPAPRALPRRSRSGSSSK------GRGPSPEGSSSTESSPEHPPKSRTAR 1717
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,216,409
Number of Sequences: 237096
Number of extensions: 2444984
Number of successful extensions: 11139
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 10134
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11104
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6579110070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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