Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_F08
         (720 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.62 
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    25   0.82 
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       24   1.1  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   7.6  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.0 bits (52), Expect = 0.62
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +3

Query: 378 PQHLTCYFTTFTMKSRLYSNY*ENFVDR 461
           P H  C F+ + +KS  Y N    F +R
Sbjct: 309 PTHFYCAFSLYPLKSTFYLNVVRPFPER 336


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 24.6 bits (51), Expect = 0.82
 Identities = 11/33 (33%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
 Frame = +3

Query: 45  FFSLCCYFVSEFNVK*KLC-ALKRVLLIRHWRK 140
           F+ +    ++ FN++ +LC  LKRV+ + +WR+
Sbjct: 232 FYYMHQQIIARFNIE-RLCNGLKRVVKLSNWRE 263


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -3

Query: 502 RHTYEHPESSPAVPLSTKFSQ*FEYN 425
           +H+Y+ P++ PA   ST     F YN
Sbjct: 77  QHSYQSPQTQPARFYSTPIVPHFAYN 102


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +3

Query: 39  FRFFSLCCYFVS 74
           F FF++CC F++
Sbjct: 75  FFFFAICCDFIA 86


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,867
Number of Sequences: 336
Number of extensions: 3377
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)