Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_F08
         (720 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_1194 + 10275700-10275901,10276263-10276352,10277097-102771...    28   8.6  

>06_01_1194 +
           10275700-10275901,10276263-10276352,10277097-10277125,
           10277316-10277362,10277683-10277735,10277949-10277962
          Length = 144

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 8/32 (25%), Positives = 21/32 (65%)
 Frame = +1

Query: 454 WIEELQVKIQGVHMCVVQSIFEHSTIYNLMKL 549
           W+   +++I G+ +C+    FE + +YN++++
Sbjct: 83  WLFLAEIQIGGLELCLCDHTFELNMVYNIIEV 114


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,771,128
Number of Sequences: 37544
Number of extensions: 295189
Number of successful extensions: 529
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 517
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 529
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1874582652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)