Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_F07
         (692 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L25599-6|AAA28051.1|  213|Caenorhabditis elegans Hypothetical pr...   171   5e-43
Z95559-20|CAB63360.2|  263|Caenorhabditis elegans Hypothetical p...   128   4e-30
Z71177-2|CAA94867.1|  425|Caenorhabditis elegans Hypothetical pr...    30   1.4  
U42835-6|AAA83589.2|  816|Caenorhabditis elegans Dehydrogenases,...    30   1.8  
Z78065-3|CAB01517.2|  406|Caenorhabditis elegans Hypothetical pr...    29   4.2  
L14714-1|AAA28180.2|  244|Caenorhabditis elegans Temporarily ass...    28   5.5  
Z81127-9|CAB03394.3|  735|Caenorhabditis elegans Hypothetical pr...    27   9.6  
Z81056-11|CAB02911.3|  735|Caenorhabditis elegans Hypothetical p...    27   9.6  
Z68160-4|CAA92292.1|  583|Caenorhabditis elegans Hypothetical pr...    27   9.6  

>L25599-6|AAA28051.1|  213|Caenorhabditis elegans Hypothetical
           protein F54H12.6 protein.
          Length = 213

 Score =  171 bits (415), Expect = 5e-43
 Identities = 95/206 (46%), Positives = 121/206 (58%), Gaps = 3/206 (1%)
 Frame = +3

Query: 72  LXAPLKPPRVSMPXTNX*LSQSYVSGYTPSQADVQVFEQVGKAP-AANLPHVLRWYNQIA 248
           + A +K P            Q++ +G+  S  D Q+F  +G AP A+  P+V RWY  +A
Sbjct: 1   MVADVKSPAGLAAFNTTLAEQAFATGFVLSGEDAQLFAALGSAPNASTYPNVARWYANVA 60

Query: 249 SYTSAERKTWSQ--GTSPLXXXXXXXXXXXXXXXXXXXXVDLFGSGXXXXXXXXXXXXXX 422
           SYT AERKTW+   G++P                      DLFGS               
Sbjct: 61  SYTDAERKTWASAGGSAPAAAAADGDDF------------DLFGSDDEEEDAEKAKIVEE 108

Query: 423 XLKAYADKKSKKPALIAKSSILLDVKPWDDETDMKEMENQVRTIEMEGLLWGASKLVPVG 602
            L AYA+KK+KK   IAKSS++LDVKPWDDETD+ EME  VR+IEM+GL+WG +KL+P+G
Sbjct: 109 RLAAYAEKKAKKAGPIAKSSVILDVKPWDDETDLGEMEKLVRSIEMDGLVWGGAKLIPIG 168

Query: 603 YGINKLQIMCVIEDDKVSVDLLTEKI 680
           YGI KLQI+ VIED KVSVD L EKI
Sbjct: 169 YGIKKLQIITVIEDLKVSVDDLIEKI 194


>Z95559-20|CAB63360.2|  263|Caenorhabditis elegans Hypothetical
           protein Y41E3.10a protein.
          Length = 263

 Score =  128 bits (309), Expect = 4e-30
 Identities = 64/106 (60%), Positives = 75/106 (70%)
 Frame = +3

Query: 363 DLFGSGXXXXXXXXXXXXXXXLKAYADKKSKKPALIAKSSILLDVKPWDDETDMKEMENQ 542
           DLFGS                L AYA KK+ K   IAKSS++LDVKPWDDETD+ EME  
Sbjct: 139 DLFGSEDEEEDEEKKKVVEERLAAYAAKKATKAGPIAKSSVILDVKPWDDETDLGEMEKL 198

Query: 543 VRTIEMEGLLWGASKLVPVGYGINKLQIMCVIEDDKVSVDLLTEKI 680
           VR+IEM+GL+WG +KL+P+GYGI KLQI+ VIED KVSVD L EKI
Sbjct: 199 VRSIEMDGLVWGGAKLIPIGYGIKKLQIITVIEDLKVSVDDLIEKI 244


>Z71177-2|CAA94867.1|  425|Caenorhabditis elegans Hypothetical
           protein AC3.3 protein.
          Length = 425

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = -3

Query: 285 PETMFCVQPKCMKQFDYTIVVRGEG*RPAPCQLAQILEHQLEKECIQTR 139
           P  + C QP CM   + + VV+     PAP Q     + Q +++C+QT+
Sbjct: 124 PAPVQC-QPSCMPACEQSCVVQ----TPAPVQCVPQCQQQCQQQCVQTQ 167


>U42835-6|AAA83589.2|  816|Caenorhabditis elegans Dehydrogenases,
           short chain protein27 protein.
          Length = 816

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 22/66 (33%), Positives = 32/66 (48%)
 Frame = +3

Query: 480 SILLDVKPWDDETDMKEMENQVRTIEMEGLLWGASKLVPVGYGINKLQIMCVIEDDKVSV 659
           SI+L VKP DDE  ++++ NQ     M G LW A++     Y   ++     I    V V
Sbjct: 436 SIMLCVKPADDEI-VQKIRNQ-----MSGALWSAAQFAVTSYVCVRVLKFLYIMCKSVLV 489

Query: 660 DLLTEK 677
             +T K
Sbjct: 490 HFITPK 495


>Z78065-3|CAB01517.2|  406|Caenorhabditis elegans Hypothetical
           protein T09E8.4 protein.
          Length = 406

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 1/117 (0%)
 Frame = -1

Query: 530 FLHIGFIIPWLDIKENRGLGNESWFLRLLV-SICFQTFFSNSFSFCILFLVTRTK*INVV 354
           FL+I  I     +K++    NE   +R+LV +I    FF  S S   +FL+ +T   N  
Sbjct: 291 FLYIAVIFKIFAMKKSTLNKNE---IRVLVQAIVIFVFFQASSS---VFLICQTIAFNTA 344

Query: 353 VIVVFRCWGGSRGFSTGGQWAGALRPCFAFSRSV*SNLIIPS*YVGKVSGRRLANLL 183
              V +     R  +T   +AGA  PCF+F  S     ++ S  +  VS +  +NL+
Sbjct: 345 TAFVIK-----RIINTLEIFAGAATPCFSFFTSKEIRKLLSS-KIAAVSSQGSSNLV 395


>L14714-1|AAA28180.2|  244|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 354, isoform a protein.
          Length = 244

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 13/48 (27%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
 Frame = +3

Query: 129 SQSYVSGYTPSQADVQVFEQV-----GKAPAANLPHVLRWYNQIASYT 257
           SQ Y++G  P++AD  +F  +      + P  N+ ++L+ Y+ +  +T
Sbjct: 187 SQKYLTGDLPTEADALLFGHMYTLITVRLPLTNITNILKKYSNLIEFT 234


>Z81127-9|CAB03394.3|  735|Caenorhabditis elegans Hypothetical
           protein F09F3.9 protein.
          Length = 735

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +2

Query: 581 LQTCACWVWHK*TANYVCH 637
           LQ CA W+WHK   NY+ +
Sbjct: 187 LQRCA-WLWHKLNENYITY 204


>Z81056-11|CAB02911.3|  735|Caenorhabditis elegans Hypothetical
           protein F09F3.9 protein.
          Length = 735

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +2

Query: 581 LQTCACWVWHK*TANYVCH 637
           LQ CA W+WHK   NY+ +
Sbjct: 187 LQRCA-WLWHKLNENYITY 204


>Z68160-4|CAA92292.1|  583|Caenorhabditis elegans Hypothetical
           protein D1046.4 protein.
          Length = 583

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 14/61 (22%), Positives = 31/61 (50%)
 Frame = -1

Query: 563 FHFNSAYLVFHFLHIGFIIPWLDIKENRGLGNESWFLRLLVSICFQTFFSNSFSFCILFL 384
           FHF+   +++  +     + W  + ++  + +  ++L ++V I    F+  SF+  IL L
Sbjct: 391 FHFDIQLILYAAIFAFLSLTWPSVFKSSNIISNKYYLPVMVRIHVVLFYFGSFASNILPL 450

Query: 383 V 381
           V
Sbjct: 451 V 451


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,356,439
Number of Sequences: 27780
Number of extensions: 283069
Number of successful extensions: 770
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 724
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 770
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)