Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_E23
(360 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q962S5 Cluster: Ribosomal protein L38; n=14; Eukaryota|... 128 2e-29
UniRef50_P63173 Cluster: 60S ribosomal protein L38; n=33; Eukary... 118 3e-26
UniRef50_O17570 Cluster: 60S ribosomal protein L38; n=24; Eukary... 115 3e-25
UniRef50_Q0V9Y6 Cluster: LOC548667 protein; n=5; Xenopus|Rep: LO... 98 5e-20
UniRef50_O22860 Cluster: 60S ribosomal protein L38; n=2; core eu... 97 6e-20
UniRef50_UPI0000F201A6 Cluster: PREDICTED: similar to 60S riboso... 96 1e-19
UniRef50_Q8MXL3 Cluster: Ribosomal protein L38, putative; n=9; T... 83 2e-15
UniRef50_A6R3N8 Cluster: Predicted protein; n=4; Dikarya|Rep: Pr... 83 2e-15
UniRef50_UPI00004985A3 Cluster: 60S ribosomal protein L38; n=1; ... 68 6e-11
UniRef50_Q6BYT4 Cluster: Debaryomyces hansenii chromosome A of s... 65 3e-10
UniRef50_Q6CF08 Cluster: Yarrowia lipolytica chromosome B of str... 60 2e-08
UniRef50_Q4UGN5 Cluster: 60S ribosomal protein L38, putative; n=... 57 1e-07
UniRef50_A2ETM7 Cluster: Ribosomal protein L38e, putative; n=1; ... 56 2e-07
UniRef50_Q6CSS8 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 55 4e-07
UniRef50_P49167 Cluster: 60S ribosomal protein L38; n=8; Fungi/M... 55 4e-07
UniRef50_A2DFD5 Cluster: 60S ribosomal protein L38-2, putative; ... 52 2e-06
UniRef50_A5K4W1 Cluster: 60S ribosomal protein L38-1, putative; ... 49 3e-05
UniRef50_Q0D5N4 Cluster: Os07g0546700 protein; n=1; Oryza sativa... 39 0.023
UniRef50_Q9YFR9 Cluster: 50S ribosomal protein L38E; n=1; Aeropy... 39 0.023
UniRef50_Q22SV3 Cluster: Putative uncharacterized protein; n=1; ... 39 0.030
UniRef50_P93679 Cluster: Ribosomal protein; n=1; Oryza sativa|Re... 38 0.040
UniRef50_A2E8L9 Cluster: 60S ribosomal protein L38-1, putative; ... 38 0.070
UniRef50_A0CD01 Cluster: Chromosome undetermined scaffold_169, w... 36 0.16
UniRef50_Q55IY1 Cluster: Putative uncharacterized protein; n=2; ... 35 0.37
UniRef50_Q7SE76 Cluster: Predicted protein; n=1; Neurospora cras... 34 0.86
UniRef50_P90857 Cluster: Putative uncharacterized protein; n=2; ... 33 2.0
UniRef50_Q1NL49 Cluster: SNF2-related:Helicase-like:SWIM Zn-fing... 32 3.5
UniRef50_Q5X081 Cluster: Putative uncharacterized protein; n=4; ... 31 4.6
UniRef50_Q0KJC2 Cluster: Putative uncharacterized protein ORF191... 31 6.1
UniRef50_A0VCY4 Cluster: Putative uncharacterized protein; n=1; ... 31 6.1
>UniRef50_Q962S5 Cluster: Ribosomal protein L38; n=14;
Eukaryota|Rep: Ribosomal protein L38 - Spodoptera
frugiperda (Fall armyworm)
Length = 70
Score = 128 bits (310), Expect = 2e-29
Identities = 63/70 (90%), Positives = 66/70 (94%)
Frame = +1
Query: 61 MPREIKXIKAFLIKARRKAAKSVKIKKHPENVKFKVRCSRFLYTLVITDKEKAEKLKQSL 240
MPREIK IK FL+KARRK AKSVKIKK+ +NVKFKVRCSRFLYTLVITDKEKAEKLKQSL
Sbjct: 1 MPREIKDIKDFLLKARRKDAKSVKIKKNQQNVKFKVRCSRFLYTLVITDKEKAEKLKQSL 60
Query: 241 PPGLQVKEVK 270
PPGLQVKEVK
Sbjct: 61 PPGLQVKEVK 70
>UniRef50_P63173 Cluster: 60S ribosomal protein L38; n=33;
Eukaryota|Rep: 60S ribosomal protein L38 - Homo sapiens
(Human)
Length = 70
Score = 118 bits (284), Expect = 3e-26
Identities = 57/70 (81%), Positives = 64/70 (91%)
Frame = +1
Query: 61 MPREIKXIKAFLIKARRKAAKSVKIKKHPENVKFKVRCSRFLYTLVITDKEKAEKLKQSL 240
MPR+I+ IK FL+ ARRK AKSVKIKK+ +NVKFKVRCSR+LYTLVITDKEKAEKLKQSL
Sbjct: 1 MPRKIEEIKDFLLTARRKDAKSVKIKKNKDNVKFKVRCSRYLYTLVITDKEKAEKLKQSL 60
Query: 241 PPGLQVKEVK 270
PPGL VKE+K
Sbjct: 61 PPGLAVKELK 70
>UniRef50_O17570 Cluster: 60S ribosomal protein L38; n=24;
Eukaryota|Rep: 60S ribosomal protein L38 -
Caenorhabditis elegans
Length = 70
Score = 115 bits (276), Expect = 3e-25
Identities = 53/70 (75%), Positives = 62/70 (88%)
Frame = +1
Query: 61 MPREIKXIKAFLIKARRKAAKSVKIKKHPENVKFKVRCSRFLYTLVITDKEKAEKLKQSL 240
MP+EIK IK FL+KARRK AKSVKIKK+ N KFKVRC+ +LYTLV+ DK+KAEKLKQSL
Sbjct: 1 MPKEIKEIKDFLVKARRKDAKSVKIKKNSNNTKFKVRCASYLYTLVVADKDKAEKLKQSL 60
Query: 241 PPGLQVKEVK 270
PPG+QVKE+K
Sbjct: 61 PPGIQVKELK 70
>UniRef50_Q0V9Y6 Cluster: LOC548667 protein; n=5; Xenopus|Rep:
LOC548667 protein - Xenopus tropicalis (Western clawed
frog) (Silurana tropicalis)
Length = 419
Score = 97.9 bits (233), Expect = 5e-20
Identities = 46/54 (85%), Positives = 51/54 (94%)
Frame = +1
Query: 109 RKAAKSVKIKKHPENVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQVKEVK 270
RK AKSVKIKK+ +NVKFKVRCS++LYTLVITDKEKAEKLKQSLPPGL VKE+K
Sbjct: 366 RKDAKSVKIKKNKDNVKFKVRCSKYLYTLVITDKEKAEKLKQSLPPGLSVKELK 419
>UniRef50_O22860 Cluster: 60S ribosomal protein L38; n=2; core
eudicotyledons|Rep: 60S ribosomal protein L38 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 69
Score = 97.5 bits (232), Expect = 6e-20
Identities = 45/69 (65%), Positives = 58/69 (84%)
Frame = +1
Query: 61 MPREIKXIKAFLIKARRKAAKSVKIKKHPENVKFKVRCSRFLYTLVITDKEKAEKLKQSL 240
MP++I IK FL+ ARRK A+SVKIK+ + VKFKVRCSR+LYTL + D+EKA+KLKQSL
Sbjct: 1 MPKQIHEIKDFLLTARRKDARSVKIKRSKDIVKFKVRCSRYLYTLCVFDQEKADKLKQSL 60
Query: 241 PPGLQVKEV 267
PPGL V+++
Sbjct: 61 PPGLSVQDL 69
>UniRef50_UPI0000F201A6 Cluster: PREDICTED: similar to 60S ribosomal
protein L38; n=1; Danio rerio|Rep: PREDICTED: similar to
60S ribosomal protein L38 - Danio rerio
Length = 154
Score = 96.3 bits (229), Expect = 1e-19
Identities = 48/69 (69%), Positives = 58/69 (84%)
Frame = +1
Query: 61 MPREIKXIKAFLIKARRKAAKSVKIKKHPENVKFKVRCSRFLYTLVITDKEKAEKLKQSL 240
+PREI+ IK FL+ A+RK AKSVKIKK+ +NVKFKVRCSR LYTLVITDKEKAEKLKQ L
Sbjct: 17 LPREIEEIKDFLLTAKRKDAKSVKIKKNKDNVKFKVRCSRHLYTLVITDKEKAEKLKQ-L 75
Query: 241 PPGLQVKEV 267
+Q++ +
Sbjct: 76 KKAVQIQRL 84
>UniRef50_Q8MXL3 Cluster: Ribosomal protein L38, putative; n=9;
Trypanosomatidae|Rep: Ribosomal protein L38, putative -
Leishmania major
Length = 83
Score = 82.6 bits (195), Expect = 2e-15
Identities = 36/65 (55%), Positives = 50/65 (76%)
Frame = +1
Query: 61 MPREIKXIKAFLIKARRKAAKSVKIKKHPENVKFKVRCSRFLYTLVITDKEKAEKLKQSL 240
MPREIK +K FL RK A+ VK+K +P KFKVRCSR+LYTLV+ DK+KA+K+++S+
Sbjct: 1 MPREIKTLKEFLAICSRKDARCVKVKHNPSATKFKVRCSRYLYTLVVNDKKKADKIERSI 60
Query: 241 PPGLQ 255
P ++
Sbjct: 61 HPSVK 65
>UniRef50_A6R3N8 Cluster: Predicted protein; n=4; Dikarya|Rep:
Predicted protein - Ajellomyces capsulatus NAm1
Length = 79
Score = 82.6 bits (195), Expect = 2e-15
Identities = 39/71 (54%), Positives = 52/71 (73%), Gaps = 2/71 (2%)
Frame = +1
Query: 61 MPREIKXIKAFLIKARRKAAKSVKIKKHPEN--VKFKVRCSRFLYTLVITDKEKAEKLKQ 234
MP E+ IK F+ RRK A S +IK++ + +KFKVRC RFLYTLV+ D +KA+KLKQ
Sbjct: 1 MPSEVSDIKQFIEICRRKDASSARIKRNRKTSQIKFKVRCQRFLYTLVLKDSDKADKLKQ 60
Query: 235 SLPPGLQVKEV 267
SLPP L++ +V
Sbjct: 61 SLPPSLKIADV 71
>UniRef50_UPI00004985A3 Cluster: 60S ribosomal protein L38; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L38 - Entamoeba histolytica HM-1:IMSS
Length = 77
Score = 67.7 bits (158), Expect = 6e-11
Identities = 27/69 (39%), Positives = 48/69 (69%)
Frame = +1
Query: 61 MPREIKXIKAFLIKARRKAAKSVKIKKHPENVKFKVRCSRFLYTLVITDKEKAEKLKQSL 240
MP++++ K L + + ++V++K + EN KFKVRC+++LYT + DK KAE+LK+++
Sbjct: 1 MPKQVQEFKQILKLLKSGSIRAVRVKTNGENTKFKVRCAKYLYTYICADKAKAEELKKAI 60
Query: 241 PPGLQVKEV 267
P + V E+
Sbjct: 61 PKDIHVVEI 69
>UniRef50_Q6BYT4 Cluster: Debaryomyces hansenii chromosome A of
strain CBS767 of Debaryomyces hansenii; n=2;
Saccharomycetaceae|Rep: Debaryomyces hansenii chromosome
A of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 78
Score = 65.3 bits (152), Expect = 3e-10
Identities = 38/78 (48%), Positives = 48/78 (61%), Gaps = 9/78 (11%)
Frame = +1
Query: 61 MPREIKXIKAFLIKARRKAAKSVKIK---------KHPENVKFKVRCSRFLYTLVITDKE 213
M REIK IK F+ ARR KS +K K + KFKVR SR+ YTLV+ D
Sbjct: 1 MAREIKDIKEFVELARRSDIKSAVVKVNKALNANGKKIKQTKFKVRGSRYQYTLVVNDAA 60
Query: 214 KAEKLKQSLPPGLQVKEV 267
KA+KL+QSLPP L++K +
Sbjct: 61 KAKKLQQSLPPTLEIKNL 78
>UniRef50_Q6CF08 Cluster: Yarrowia lipolytica chromosome B of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome B of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 84
Score = 59.7 bits (138), Expect = 2e-08
Identities = 26/65 (40%), Positives = 40/65 (61%)
Frame = +1
Query: 73 IKXIKAFLIKARRKAAKSVKIKKHPENVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGL 252
+ IK FL R +SV +K + KFK+RC R LYTL + D+ KA+K+ QSLP +
Sbjct: 18 LTSIKDFLATCSRDDVESVTVKYSANDTKFKIRCPRMLYTLTVDDRTKADKIVQSLPSSI 77
Query: 253 QVKEV 267
++ ++
Sbjct: 78 KIIKI 82
>UniRef50_Q4UGN5 Cluster: 60S ribosomal protein L38, putative; n=3;
Piroplasmida|Rep: 60S ribosomal protein L38, putative -
Theileria annulata
Length = 79
Score = 56.8 bits (131), Expect = 1e-07
Identities = 29/74 (39%), Positives = 46/74 (62%), Gaps = 5/74 (6%)
Frame = +1
Query: 61 MPREIKXIKAFLIKARRKAAKSVKIKKHPE-----NVKFKVRCSRFLYTLVITDKEKAEK 225
MP+E+K +K +L +R AKSV + K + KFKVRCSR+LYT + ++ KA K
Sbjct: 1 MPKELKDLKDYLNVLKRPDAKSVVVYKKKSKGGLLSTKFKVRCSRYLYTFSVPNQVKAAK 60
Query: 226 LKQSLPPGLQVKEV 267
++ ++P L+ K +
Sbjct: 61 VEATIPSNLEKKVI 74
>UniRef50_A2ETM7 Cluster: Ribosomal protein L38e, putative; n=1;
Trichomonas vaginalis G3|Rep: Ribosomal protein L38e,
putative - Trichomonas vaginalis G3
Length = 98
Score = 55.6 bits (128), Expect = 2e-07
Identities = 30/71 (42%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Frame = +1
Query: 49 FVFNMPREIKXIKAFLIKARRKAAKSVKIKKHP-ENVKFKVRCSRFLYTLVITDKEKAEK 225
F +MP+++ K FL A R AK VK+KK EN KFK+R +++LYTL + K E
Sbjct: 21 FFTSMPKQVTTPKEFLALAARSDAKWVKVKKSSDENTKFKLRTTKYLYTLTVKPK-FVEL 79
Query: 226 LKQSLPPGLQV 258
++ S+P L+V
Sbjct: 80 VQNSIPESLEV 90
>UniRef50_Q6CSS8 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome C of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=3; Saccharomycetales|Rep: Kluyveromyces lactis
strain NRRL Y-1140 chromosome C of strain NRRL Y- 1140
of Kluyveromyces lactis - Kluyveromyces lactis (Yeast)
(Candida sphaerica)
Length = 78
Score = 54.8 bits (126), Expect = 4e-07
Identities = 37/78 (47%), Positives = 47/78 (60%), Gaps = 9/78 (11%)
Frame = +1
Query: 61 MPREIKXIKAFLIKARRKAAKS--VKI-KKHPEN------VKFKVRCSRFLYTLVITDKE 213
M +EI IK FL RR+ S VKI KK +N KFK+R SR+LYTL++ D
Sbjct: 1 MAKEIADIKEFLELIRRQDVNSATVKINKKLNKNGKAFRQTKFKLRGSRYLYTLIVNDAG 60
Query: 214 KAEKLKQSLPPGLQVKEV 267
KA+KL QSLPP V ++
Sbjct: 61 KAKKLLQSLPPTFNVNKL 78
>UniRef50_P49167 Cluster: 60S ribosomal protein L38; n=8;
Fungi/Metazoa group|Rep: 60S ribosomal protein L38 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 78
Score = 54.8 bits (126), Expect = 4e-07
Identities = 37/78 (47%), Positives = 42/78 (53%), Gaps = 9/78 (11%)
Frame = +1
Query: 61 MPREIKXIKAFLIKARRKAAKSVKIK---------KHPENVKFKVRCSRFLYTLVITDKE 213
M REI IK FL RR K+ +K K KFKVR S LYTLVI D
Sbjct: 1 MAREITDIKQFLELTRRADVKTATVKINKKLNKAGKPFRQTKFKVRGSSSLYTLVINDAG 60
Query: 214 KAEKLKQSLPPGLQVKEV 267
KA+KL QSLPP L+V +
Sbjct: 61 KAKKLIQSLPPTLKVNRL 78
>UniRef50_A2DFD5 Cluster: 60S ribosomal protein L38-2, putative;
n=4; Trichomonas vaginalis G3|Rep: 60S ribosomal protein
L38-2, putative - Trichomonas vaginalis G3
Length = 74
Score = 52.4 bits (120), Expect = 2e-06
Identities = 29/67 (43%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Frame = +1
Query: 61 MPREIKXIKAFLIKARRKAAKSVKIKKHPENV-KFKVRCSRFLYTLVITDKEKAEKLKQS 237
MP+++ K FL A R AK VK+KK +++ KFK+R ++FLYTLV+ K E ++ S
Sbjct: 1 MPKQVATPKEFLALAARPDAKWVKVKKVNDDLTKFKLRTTKFLYTLVVKPK-FVELVQNS 59
Query: 238 LPPGLQV 258
+P L+V
Sbjct: 60 IPESLEV 66
>UniRef50_A5K4W1 Cluster: 60S ribosomal protein L38-1, putative;
n=4; Plasmodium|Rep: 60S ribosomal protein L38-1,
putative - Plasmodium vivax
Length = 93
Score = 48.8 bits (111), Expect = 3e-05
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 7/72 (9%)
Frame = +1
Query: 61 MPREIKXIKAFLIKARRKAAKSV-------KIKKHPENVKFKVRCSRFLYTLVITDKEKA 219
MP++I I+ FL +R+ +V K KK+ K K+R ++LYT+V DK+KA
Sbjct: 1 MPKQITDIRKFLKISRKPDTTAVIIMKKKSKTKKNTIITKLKLRTKKYLYTMVFADKKKA 60
Query: 220 EKLKQSLPPGLQ 255
E+++ SL P L+
Sbjct: 61 ERIENSLLPSLK 72
>UniRef50_Q0D5N4 Cluster: Os07g0546700 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os07g0546700 protein -
Oryza sativa subsp. japonica (Rice)
Length = 94
Score = 39.1 bits (87), Expect = 0.023
Identities = 21/53 (39%), Positives = 32/53 (60%)
Frame = +3
Query: 60 HAA*NQXYQSLFN*GAEESRQIGQNKEAP*ECQVQGSMLKVPVHPGHH*QREG 218
HA + Q L G EE R++G ++E QVQG++L+VP+HP +R+G
Sbjct: 16 HAEADPRDQGLPPDGEEEGREVGADQEDQGRRQVQGALLQVPLHPLRLRRRQG 68
>UniRef50_Q9YFR9 Cluster: 50S ribosomal protein L38E; n=1; Aeropyrum
pernix|Rep: 50S ribosomal protein L38E - Aeropyrum
pernix
Length = 67
Score = 39.1 bits (87), Expect = 0.023
Identities = 21/58 (36%), Positives = 33/58 (56%)
Frame = +1
Query: 61 MPREIKXIKAFLIKARRKAAKSVKIKKHPENVKFKVRCSRFLYTLVITDKEKAEKLKQ 234
MP E+K F+ R A ++K+ + VK K R R+LYTL + +++AE L+Q
Sbjct: 1 MPVELKSFDEFVKVVER--AVECRVKRGKDVVKIKARTKRYLYTLKVPPEKEAEVLEQ 56
>UniRef50_Q22SV3 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 89
Score = 38.7 bits (86), Expect = 0.030
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Frame = +1
Query: 61 MPREIKXIKAFL--------IKARRKAAKSVKIKKHPENVKFKVRCSRFLYTLVITDKEK 216
MP+EI IK F+ A A K V +K + KFK+R ++LYT D +
Sbjct: 1 MPKEITDIKKFMKLWQNNKDTPATAGAKKVVYVKTNKRITKFKLRGKKYLYTFKTADPKI 60
Query: 217 AEKLKQSLPPGLQVKEVK 270
A+ +K ++P E+K
Sbjct: 61 AKGIKDAIPATYSKIEIK 78
>UniRef50_P93679 Cluster: Ribosomal protein; n=1; Oryza sativa|Rep:
Ribosomal protein - Oryza sativa (Rice)
Length = 79
Score = 38.3 bits (85), Expect = 0.040
Identities = 17/39 (43%), Positives = 27/39 (69%)
Frame = +3
Query: 102 GAEESRQIGQNKEAP*ECQVQGSMLKVPVHPGHH*QREG 218
G EE R++G ++E QVQG++L+VP+HP +R+G
Sbjct: 15 GEEEGREVGADQEDQGRRQVQGALLQVPLHPLRLRRRQG 53
>UniRef50_A2E8L9 Cluster: 60S ribosomal protein L38-1, putative;
n=1; Trichomonas vaginalis G3|Rep: 60S ribosomal protein
L38-1, putative - Trichomonas vaginalis G3
Length = 93
Score = 37.5 bits (83), Expect = 0.070
Identities = 19/62 (30%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = +1
Query: 61 MPREIKXIKAFLIKARRKAAKSVKIKK-HPENVKFKVRCSRFLYTLVITDKEKAEKLKQS 237
MP+++ + F+ + AK+V I + + E KFK++ ++ LYTL + E +++ S
Sbjct: 1 MPKQVLTARQFVERCMAPDAKNVVILRVNDETAKFKLKTTKQLYTLTVKKGELIQQVIDS 60
Query: 238 LP 243
LP
Sbjct: 61 LP 62
>UniRef50_A0CD01 Cluster: Chromosome undetermined scaffold_169,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_169,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 177
Score = 36.3 bits (80), Expect = 0.16
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 10/71 (14%)
Frame = +1
Query: 61 MPREIKXIKAFLI----------KARRKAAKSVKIKKHPENVKFKVRCSRFLYTLVITDK 210
MP+EI+ +K FL A ++ K++ IK+ + KFK+R ++L+T DK
Sbjct: 1 MPKEIQDVKEFLSLMKGSEAQGKDANKEPKKNLYIKESKKITKFKLRGKKYLFTFKTADK 60
Query: 211 EKAEKLKQSLP 243
KA + + P
Sbjct: 61 NKASRNSINTP 71
>UniRef50_Q55IY1 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 162
Score = 35.1 bits (77), Expect = 0.37
Identities = 19/40 (47%), Positives = 23/40 (57%)
Frame = +2
Query: 116 PPNRSK*RSTLRMSSSRFDAQGSCTPWSSLTKRRLRNLSR 235
PP+ R SSR DA +CTP S+T RRLR+ SR
Sbjct: 100 PPSLRLPRPPPTSPSSRSDAPSTCTPLFSMTLRRLRSSSR 139
>UniRef50_Q7SE76 Cluster: Predicted protein; n=1; Neurospora
crassa|Rep: Predicted protein - Neurospora crassa
Length = 1007
Score = 33.9 bits (74), Expect = 0.86
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = +2
Query: 71 KSKXSKPF*LRRGGKPPNRSK*RSTLRMSSSRFDAQGSCTPWSSLTKRRLRNLSRVYLQV 250
+ + P L+ G + P RS +S+ RMS SR DA+ + SS++ S+ +
Sbjct: 271 RRRSGTPVSLKEGDQTPERSDSKSSNRMSRSRSDARSKLSKVSSVSSEATETQSQTFTSQ 330
Query: 251 SK 256
S+
Sbjct: 331 SR 332
>UniRef50_P90857 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 711
Score = 32.7 bits (71), Expect = 2.0
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +2
Query: 110 GKPPNRSK*RSTLRMSSSRFDAQGSCTPWSSLTKRRLRN 226
G+P NR++ T+ S+S+ A S P+SS+T R RN
Sbjct: 194 GRPQNRTRPDETVYQSASQIYAPNSEDPYSSITSERGRN 232
>UniRef50_Q1NL49 Cluster: SNF2-related:Helicase-like:SWIM
Zn-finger:DEAD/DEAH box helicase-like; n=2; delta
proteobacterium MLMS-1|Rep:
SNF2-related:Helicase-like:SWIM Zn-finger:DEAD/DEAH box
helicase-like - delta proteobacterium MLMS-1
Length = 1022
Score = 31.9 bits (69), Expect = 3.5
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +1
Query: 130 KIKKHPENVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQ 255
KI+KHPE +FK + F Y + D E A +L+ P L+
Sbjct: 195 KIRKHPEYERFKEEPAPFPYVYLAWDVENAPRLRLHRPRRLR 236
>UniRef50_Q5X081 Cluster: Putative uncharacterized protein; n=4;
Legionella pneumophila|Rep: Putative uncharacterized
protein - Legionella pneumophila (strain Lens)
Length = 445
Score = 31.5 bits (68), Expect = 4.6
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 142 HPE-NVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQVKEV 267
HP N+++ V C R YTL D E++K+ L L++ E+
Sbjct: 47 HPILNIEYSVLCQRLKYTLSSLDYSSPEQIKEQLIDALKLAEL 89
>UniRef50_Q0KJC2 Cluster: Putative uncharacterized protein ORF191;
n=1; Sphingomonas sp. KA1|Rep: Putative uncharacterized
protein ORF191 - Sphingomonas sp. KA1
Length = 591
Score = 31.1 bits (67), Expect = 6.1
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Frame = -1
Query: 183 EP*ASNLELDILRVLLYF--DRFGGFPPRLN 97
EP + L+LD + V+L DRFGG PP++N
Sbjct: 206 EPDLAKLDLDDIGVMLAVIDDRFGGIPPKVN 236
>UniRef50_A0VCY4 Cluster: Putative uncharacterized protein; n=1;
Delftia acidovorans SPH-1|Rep: Putative uncharacterized
protein - Delftia acidovorans SPH-1
Length = 90
Score = 31.1 bits (67), Expect = 6.1
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = +2
Query: 104 RGGKPPNRSK*RSTLRMSSSRFDAQGSCTPWSSLTKRRLRNLS 232
R G+P R + R S F +G TPWSS +RLR +S
Sbjct: 48 RAGEPKRRRRQRCDRCRSPCAFIYKGYFTPWSSSKVKRLRCMS 90
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 268,039,135
Number of Sequences: 1657284
Number of extensions: 4228229
Number of successful extensions: 10250
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 10111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10244
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 12367962079
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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