Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_E23
         (360 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075491-1|AAL68301.1|   70|Drosophila melanogaster RE42506p pro...   117   5e-27
AE013599-14|EAA46007.1|   70|Drosophila melanogaster CG18001-PA ...   117   5e-27
AE014298-1695|AAF48098.2| 1168|Drosophila melanogaster CG32662-P...    27   7.2  

>AY075491-1|AAL68301.1|   70|Drosophila melanogaster RE42506p
           protein.
          Length = 70

 Score =  117 bits (281), Expect = 5e-27
 Identities = 54/70 (77%), Positives = 62/70 (88%)
 Frame = +1

Query: 61  MPREIKXIKAFLIKARRKAAKSVKIKKHPENVKFKVRCSRFLYTLVITDKEKAEKLKQSL 240
           MPREIK +K FL KARR  A++VKIKK+P N KFK+RCSRFLYTLV+ DKEKA+K+KQSL
Sbjct: 1   MPREIKEVKDFLNKARRSDARAVKIKKNPTNTKFKIRCSRFLYTLVVQDKEKADKIKQSL 60

Query: 241 PPGLQVKEVK 270
           PPGLQVKEVK
Sbjct: 61  PPGLQVKEVK 70


>AE013599-14|EAA46007.1|   70|Drosophila melanogaster CG18001-PA
           protein.
          Length = 70

 Score =  117 bits (281), Expect = 5e-27
 Identities = 54/70 (77%), Positives = 62/70 (88%)
 Frame = +1

Query: 61  MPREIKXIKAFLIKARRKAAKSVKIKKHPENVKFKVRCSRFLYTLVITDKEKAEKLKQSL 240
           MPREIK +K FL KARR  A++VKIKK+P N KFK+RCSRFLYTLV+ DKEKA+K+KQSL
Sbjct: 1   MPREIKEVKDFLNKARRSDARAVKIKKNPTNTKFKIRCSRFLYTLVVQDKEKADKIKQSL 60

Query: 241 PPGLQVKEVK 270
           PPGLQVKEVK
Sbjct: 61  PPGLQVKEVK 70


>AE014298-1695|AAF48098.2| 1168|Drosophila melanogaster CG32662-PA
           protein.
          Length = 1168

 Score = 27.1 bits (57), Expect = 7.2
 Identities = 17/55 (30%), Positives = 29/55 (52%)
 Frame = +1

Query: 100 KARRKAAKSVKIKKHPENVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQVKE 264
           K R++  + ++ K+  E +K K R  +      I +KE+ EKLK+     L+ KE
Sbjct: 595 KLRKEREEKMREKEREEKIKEKERVEK------IKEKEREEKLKKEKEEKLKEKE 643


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,159,461
Number of Sequences: 53049
Number of extensions: 199425
Number of successful extensions: 579
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 570
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 579
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 901135692
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)