Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_E13
         (820 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    24   1.7  
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    22   5.1  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    22   6.7  
DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory pro...    21   8.9  

>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 7/54 (12%)
 Frame = +1

Query: 601 KRADPNAKYARRYCQ--KSLKTVFI-----AGEHCDQDTRQWAERXFGVPXLNH 741
           ++ADPN  Y R+Y    K++ + +I     A E   +  +    + + +P +NH
Sbjct: 433 RKADPNGDYIRKYLPVLKNMPSQYIHEPWTAPEQVQRAAKCIIGKDYSLPMVNH 486


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = -2

Query: 537 EILSRIWCTIWFSFIQNGSHSSQERT 460
           +I  + +  +W SF +NG  + +E+T
Sbjct: 458 DIAVKRFVKLWTSFAKNGDPNPKEKT 483


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +1

Query: 415 ASDLGWVVGHSYICYGPLLAG 477
           A D  W V  + I Y PLLAG
Sbjct: 414 AEDSKWRVRSAIIEYMPLLAG 434


>DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory
           protein 7 protein.
          Length = 127

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 592 RVLKRADPNAKYARRY 639
           R+ K+ DP  +Y +RY
Sbjct: 102 RLSKKYDPQGQYKKRY 117


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,122
Number of Sequences: 336
Number of extensions: 3518
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22414104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)