Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_E13
         (820 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66495-9|CAH19100.1|  670|Caenorhabditis elegans Hypothetical pr...    92   4e-19
Z66495-8|CAA91274.1|  680|Caenorhabditis elegans Hypothetical pr...    92   4e-19
AL117202-23|CAB97239.2| 1428|Caenorhabditis elegans Hypothetical...    28   9.2  

>Z66495-9|CAH19100.1|  670|Caenorhabditis elegans Hypothetical
           protein C36A4.9b protein.
          Length = 670

 Score = 92.3 bits (219), Expect = 4e-19
 Identities = 50/157 (31%), Positives = 80/157 (50%), Gaps = 5/157 (3%)
 Frame = +1

Query: 307 GTTDAPKGVQRPCGHAATLCWSMKK-VYGLQRG-VWWAASDLGWVVGHSYICYGPLLAGM 480
           G+T  PKG+Q       T  ++  K  +  Q   V+W  +D GW+ GHSY+ YGPL+ G+
Sbjct: 287 GSTGKPKGIQHTTAGYMTYAYATTKYTFDAQEDDVYWCTADCGWITGHSYLLYGPLMNGL 346

Query: 481 TSVLYEGKPDRTPDPGQYFRIIEQHRVNALFTIPTAFRVLKRADPNAKYARRYCQKSLKT 660
             + YEG P   P P + + + +++ V  L+T PTA R L       ++     +K+LK 
Sbjct: 347 KGIWYEGVP-TYPTPSRMWDVTDKYGVTKLYTSPTAARALMAL--GNQWLESSSRKTLKV 403

Query: 661 VFIAGEHCDQDTRQWAERXFG---VPXLNHWWQTESG 762
           +   GE  +     W  +  G   V  ++ +WQTE+G
Sbjct: 404 IGTVGEPINPAAWMWLYKQVGLSNVSIVDTYWQTETG 440


>Z66495-8|CAA91274.1|  680|Caenorhabditis elegans Hypothetical
           protein C36A4.9a protein.
          Length = 680

 Score = 92.3 bits (219), Expect = 4e-19
 Identities = 50/157 (31%), Positives = 80/157 (50%), Gaps = 5/157 (3%)
 Frame = +1

Query: 307 GTTDAPKGVQRPCGHAATLCWSMKK-VYGLQRG-VWWAASDLGWVVGHSYICYGPLLAGM 480
           G+T  PKG+Q       T  ++  K  +  Q   V+W  +D GW+ GHSY+ YGPL+ G+
Sbjct: 297 GSTGKPKGIQHTTAGYMTYAYATTKYTFDAQEDDVYWCTADCGWITGHSYLLYGPLMNGL 356

Query: 481 TSVLYEGKPDRTPDPGQYFRIIEQHRVNALFTIPTAFRVLKRADPNAKYARRYCQKSLKT 660
             + YEG P   P P + + + +++ V  L+T PTA R L       ++     +K+LK 
Sbjct: 357 KGIWYEGVP-TYPTPSRMWDVTDKYGVTKLYTSPTAARALMAL--GNQWLESSSRKTLKV 413

Query: 661 VFIAGEHCDQDTRQWAERXFG---VPXLNHWWQTESG 762
           +   GE  +     W  +  G   V  ++ +WQTE+G
Sbjct: 414 IGTVGEPINPAAWMWLYKQVGLSNVSIVDTYWQTETG 450


>AL117202-23|CAB97239.2| 1428|Caenorhabditis elegans Hypothetical
           protein Y47D3A.29 protein.
          Length = 1428

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +3

Query: 159 IECYNVCGTTPEYEKAQQRSLNDPSS 236
           I+ YN+C TT EY K     L+ P S
Sbjct: 847 IQEYNICYTTLEYSKDSDEQLSVPQS 872


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,164,587
Number of Sequences: 27780
Number of extensions: 343062
Number of successful extensions: 904
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 866
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 902
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2019417216
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)