Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_E09
         (826 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    29   0.059
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    29   0.059
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    25   0.96 
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    25   0.96 
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   5.1  
L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protei...    22   6.8  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    22   6.8  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    22   6.8  

>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 28.7 bits (61), Expect = 0.059
 Identities = 17/49 (34%), Positives = 24/49 (48%)
 Frame = +3

Query: 549 KQEHRCHTCEEEISDWDELEKHLIQHVSLPSTGIEELLLEYSPPSGNEN 695
           ++ +RC  C++  SD   L KHL  H        +  LL +S  SGN N
Sbjct: 75  ERPYRCRLCKKAFSDSSTLTKHLRIHSGEKPYECKLCLLRFS-QSGNLN 122


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 28.7 bits (61), Expect = 0.059
 Identities = 17/49 (34%), Positives = 24/49 (48%)
 Frame = +3

Query: 549 KQEHRCHTCEEEISDWDELEKHLIQHVSLPSTGIEELLLEYSPPSGNEN 695
           ++ +RC  C++  SD   L KHL  H        +  LL +S  SGN N
Sbjct: 331 ERPYRCRLCKKAFSDSSTLTKHLRIHSGEKPYECKLCLLRFS-QSGNLN 378


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 24.6 bits (51), Expect = 0.96
 Identities = 22/90 (24%), Positives = 33/90 (36%), Gaps = 2/90 (2%)
 Frame = +3

Query: 363 QSSHSFPNLTVSMPSATRNVANKAETNQ--SRRDSEDQDSADTSSQQVESLRTLQSTGAP 536
           QS  S   +T  M   T++  N     Q  S R S+D       S    +    Q  G P
Sbjct: 486 QSFRSLAEMTSHMQQ-TQHYTNIISQEQIISWRSSDDAKGGGGGSGSGNN----QPPGGP 540

Query: 537 IKKPKQEHRCHTCEEEISDWDELEKHLIQH 626
                    C  C++  S   EL  H++++
Sbjct: 541 SSHVSAVLTCKVCDQAFSSLKELSNHMVKN 570


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 24.6 bits (51), Expect = 0.96
 Identities = 10/42 (23%), Positives = 19/42 (45%)
 Frame = +3

Query: 549 KQEHRCHTCEEEISDWDELEKHLIQHVSLPSTGIEELLLEYS 674
           ++ +RC  C+ +      L +HL  H      G E   +++S
Sbjct: 188 ERPYRCEHCDRQFVQVANLRRHLRVHTGERPYGCEHCSMKFS 229


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 protein.
          Length = 980

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = +3

Query: 576  EEEISDWDELEKHLIQHVSLPST 644
            ++ + DW E  +  +QH + P T
Sbjct: 956  DQNVCDWPENVEGCMQHTAAPPT 978


>L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protein
           protein.
          Length = 74

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 9/35 (25%), Positives = 15/35 (42%)
 Frame = +3

Query: 549 KQEHRCHTCEEEISDWDELEKHLIQHVSLPSTGIE 653
           ++ +RC  C+ +      L +HL  H      G E
Sbjct: 35  ERPYRCEHCDRQFVQVANLRRHLRVHTGERPYGCE 69


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 10/38 (26%), Positives = 23/38 (60%)
 Frame = -3

Query: 254 WYCVSYKSVTL*MITFFKVPIANSDLVVDVNVPFILNI 141
           ++ V++  V   + TFFK+P  ++   +++ V  IL++
Sbjct: 29  YFMVAFYVVFSSVSTFFKIPFYSTLRPINLLVQIILDV 66


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 10/38 (26%), Positives = 23/38 (60%)
 Frame = -3

Query: 254 WYCVSYKSVTL*MITFFKVPIANSDLVVDVNVPFILNI 141
           ++ V++  V   + TFFK+P  ++   +++ V  IL++
Sbjct: 29  YFMVAFYVVFSSVSTFFKIPFYSTLRPINLLVQIILDV 66


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,638
Number of Sequences: 336
Number of extensions: 4251
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22621642
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)