Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_E09
(826 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1420.01c ||SPAC56E4.08c|DUF1752 family protein|Schizosacchar... 31 0.20
SPCC10H11.01 |prp11||ATP-dependent RNA helicase Prp11|Schizosacc... 29 0.80
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 28 1.4
SPBC3H7.14 |mug176||BRCT domain protein|Schizosaccharomyces pomb... 28 1.8
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 28 1.8
SPAC12G12.09 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 28 1.8
SPCC11E10.03 |mug1||dynactin complex subunit |Schizosaccharomyce... 27 2.4
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 27 2.4
SPAC17C9.11c |||zinc finger protein, zf-C2H2 type/UBA domain pro... 27 2.4
SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin homolog|Sc... 27 3.2
SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces pomb... 27 4.3
SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyce... 26 5.6
SPAC16E8.06c |nop12||RNA-binding protein Nop12|Schizosaccharomyc... 26 5.6
SPAC22H10.09 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 26 5.6
SPAC869.06c |||cation binding protein |Schizosaccharomyces pombe... 26 7.5
SPAC14C4.07 |||membrane transporter|Schizosaccharomyces pombe|ch... 26 7.5
SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces pomb... 26 7.5
SPBC1861.05 |||carbohydrate kinase|Schizosaccharomyces pombe|chr... 26 7.5
SPCC1739.03 |hrr1||Helicase Required for RNAi-mediated heterochr... 26 7.5
SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein Zds1|Sch... 26 7.5
SPBC947.08c |||histone promoter control protein Hpc2 |Schizosacc... 25 9.9
SPAC227.16c |||GINS complex subunit Psf3|Schizosaccharomyces pom... 25 9.9
>SPAC1420.01c ||SPAC56E4.08c|DUF1752 family
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 580
Score = 31.1 bits (67), Expect = 0.20
Identities = 19/68 (27%), Positives = 28/68 (41%)
Frame = +3
Query: 333 LTSAQMTKVQQSSHSFPNLTVSMPSATRNVANKAETNQSRRDSEDQDSADTSSQQVESLR 512
+ SA + +S FP+ TV P T +A D +D D A S + ES
Sbjct: 369 ICSAAVDSESVNSADFPHRTVYDPLPTHAIAESISQENVIEDDDDDDDAWVSVDEAESPH 428
Query: 513 TLQSTGAP 536
+ + AP
Sbjct: 429 FTKRSPAP 436
>SPCC10H11.01 |prp11||ATP-dependent RNA helicase
Prp11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1014
Score = 29.1 bits (62), Expect = 0.80
Identities = 38/179 (21%), Positives = 64/179 (35%), Gaps = 4/179 (2%)
Frame = +3
Query: 300 VDENMPTLM-QPLTSAQMTKVQQSSHSFPNLTVSMPSATRNVANKAETNQSRRDSEDQDS 476
V + + TL Q L + K + + F +S TRN K + D ED ++
Sbjct: 794 VPKELQTLASQFLEKVKAGKEKAAGGGFGGKGLSRLDETRNAERKMQRKAYGEDEEDVET 853
Query: 477 ADTSSQQVESLRTLQSTGAPIKKPKQEHRCHTCEEEISDWDELEKHLIQHVSLPSTGIEE 656
+ +E + +STG P + ++ L Q +S+ T +E
Sbjct: 854 EAEAKSPLEKITPEKSTGDPTLDRVRAAVGGIAARAFANQTAQSNKLTQPISIIKTDGDE 913
Query: 657 --LLLEYSPPSGNENWSXEDEEPAA-VNKLSGLGFTIKXNRMRIKQEPGYNATPESDDL 824
+E + W+ + V +L+G T K N PG N P + L
Sbjct: 914 YKAKMEINDYPQQARWAVTNNTNIVHVTELTGTSITTKGNFYL----PGKNPEPGEEKL 968
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 28.3 bits (60), Expect = 1.4
Identities = 30/145 (20%), Positives = 62/145 (42%)
Frame = +3
Query: 99 HLTKFNSWKSVLAKDVQDKGDIYIYNQIRICDRHFEKCYHSQSHRLIANAVPTLNIGFSQ 278
H T +S ++ L + + + Y+ +R + FE+ ++S ++AN + TL FS+
Sbjct: 496 HQTALSSVENRLDEISEIVDSYHKYSGVRTKLQVFEENKTNKS-AILANQLMTLKSSFSE 554
Query: 279 QQPVEIEVDENMPTLMQPLTSAQMTKVQQSSHSFPNLTVSMPSATRNVANKAETNQSRRD 458
E++ D+N + L K+Q+ + S+ R+V + E S
Sbjct: 555 VMSYELKDDDNYNEELDKLVEDVRKKLQEKEEA--------ESSLRSVRERLEIRISLSV 606
Query: 459 SEDQDSADTSSQQVESLRTLQSTGA 533
D + + ++L++ T A
Sbjct: 607 QSINDLTENKKIKTKTLKSYSGTFA 631
>SPBC3H7.14 |mug176||BRCT domain protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 406
Score = 27.9 bits (59), Expect = 1.8
Identities = 30/137 (21%), Positives = 50/137 (36%), Gaps = 1/137 (0%)
Frame = +3
Query: 312 MPTLMQPLTSAQMTKVQQSSHSFPNLTVSMPSATRNVANKAETNQSRRDSEDQDSADTSS 491
MP+L Q T + + HS S+PS N + N R ++S +
Sbjct: 1 MPSLNQEETPKKTKNPYRKGHSRRQSRHSIPSDELNSNSSKSLNNDRISRTIENSLQKET 60
Query: 492 QQVESLRTLQSTGAPIKKPK-QEHRCHTCEEEISDWDELEKHLIQHVSLPSTGIEELLLE 668
++ L T + PK +E C+ +DE ++ PS + L +
Sbjct: 61 NSDNKIKKLSKTKSNPTNPKSEEDPSQICQ----SFDE------SNIITPSKYLFPLSKD 110
Query: 669 YSPPSGNENWSXEDEEP 719
YSP G ++ P
Sbjct: 111 YSPNEGLFQTDMNEKNP 127
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 27.9 bits (59), Expect = 1.8
Identities = 22/80 (27%), Positives = 36/80 (45%)
Frame = +3
Query: 288 VEIEVDENMPTLMQPLTSAQMTKVQQSSHSFPNLTVSMPSATRNVANKAETNQSRRDSED 467
VE+ + + + PLTS+ + + S+ S S S+T + A T+ S S
Sbjct: 155 VEVSISSSSLSSSDPLTSSTFSSLSSSTSSSQPSVSSTSSSTFSSAAPTSTSSSYLSSSS 214
Query: 468 QDSADTSSQQVESLRTLQST 527
S+ +SS S TL S+
Sbjct: 215 VVSS-SSSPSSSSSSTLTSS 233
>SPAC12G12.09 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 977
Score = 27.9 bits (59), Expect = 1.8
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +3
Query: 162 IYIYNQIRICDRHFEKCYHSQSHRLIANAVPTLNIGFSQQQPVEIEV 302
+ +Y Q + + HF K H++ H L+ +A+ L + Q+ EI V
Sbjct: 290 LILYTQSDVKNLHFGKNKHTKPHLLVMDALSNLYVWKILQKRSEISV 336
>SPCC11E10.03 |mug1||dynactin complex subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 351
Score = 27.5 bits (58), Expect = 2.4
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 5/152 (3%)
Frame = +3
Query: 105 TKFNSWKSVLAKDVQDKGDIYIYNQIRICDRHFEKCYHSQSHRLIA---NAVPTLNIGFS 275
++ SWK +LAK D +++ +C + + S + + + V L I S
Sbjct: 207 SRIESWKQLLAK------DFLKHHERNLCSIEKQTTLKNSSLKELCTEEDIVIMLEI-CS 259
Query: 276 QQQPVEIEVDENMPTLMQPLTSAQMTKVQQSSHSFPNLTVSMPSATRNV--ANKAETNQS 449
Q P V++ MP L PL ++ K Q+ H+ +S +++V ++E N+
Sbjct: 260 SQLPF---VEQYMPIL--PLLLERL-KSLQNMHTDAAEAISSWQGSKDVMMTMQSELNEW 313
Query: 450 RRDSEDQDSADTSSQQVESLRTLQSTGAPIKK 545
+ E D + +Q VE +R L T ++K
Sbjct: 314 KNTVERLDHSKFYTQSVEEMRRLSDTVTQLEK 345
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 27.5 bits (58), Expect = 2.4
Identities = 18/82 (21%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = +3
Query: 390 TVSMPSATRNVANKAETNQSRRDSEDQDSADTSSQQV-ESLRTLQSTGAPIKKPKQEHRC 566
T+S + N+ + ++ ++ S ++S+ V S + AP +K KQ + C
Sbjct: 15 TLSESKVSENLMS-INSDSGTSNANTPSSVTSNSKPVASSTAAKKDPNAPPQKVKQ-YVC 72
Query: 567 HTCEEEISDWDELEKHLIQHVS 632
TC + + L++H+ H +
Sbjct: 73 ETCTRAFARLEHLKRHIRSHTN 94
>SPAC17C9.11c |||zinc finger protein, zf-C2H2 type/UBA domain
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 240
Score = 27.5 bits (58), Expect = 2.4
Identities = 13/51 (25%), Positives = 25/51 (49%)
Frame = +3
Query: 423 ANKAETNQSRRDSEDQDSADTSSQQVESLRTLQSTGAPIKKPKQEHRCHTC 575
A AE + ++D ++++ +++ T APIK+PK + TC
Sbjct: 109 AEDAEQRKKILAEIERDKKRRAAERENKNSSVKETAAPIKQPKNANSSSTC 159
>SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 997
Score = 27.1 bits (57), Expect = 3.2
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 7/90 (7%)
Frame = +3
Query: 441 NQSRR-DSEDQDSADTSSQQVESLRTLQSTGAPIKKPKQEHR-----CHTCEEEISDWDE 602
N S+R D+ + + E+L T+ PI + E R C+ C + DW++
Sbjct: 21 NYSKRLDTFQKKKWPRAKPTPETLATVGFYYNPISESNSEERLDNVTCYMCTKSFYDWED 80
Query: 603 LEKHLIQHVS-LPSTGIEELLLEYSPPSGN 689
+ L +H++ PS +L + P+ N
Sbjct: 81 DDDPLKEHITHSPSCPWAYILSSKNNPNQN 110
>SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1778
Score = 26.6 bits (56), Expect = 4.3
Identities = 23/105 (21%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
Frame = +3
Query: 276 QQQPVEIEVDENMPTLMQPLTSAQMTKVQQSSHSFPNLTVSMPSATRNVANKAET-NQSR 452
QQQP++ +D+N P PL S+ ++V +S P ++ P ++ KA + Q
Sbjct: 627 QQQPLQASIDQN-PYGNNPLFSSTTSQVAPTSIQEP---IASPLTSKPTPKKAASLPQFW 682
Query: 453 RDSEDQDSADTSSQQVESLRTLQSTGAPIKKPKQEHRCHTCEEEI 587
++A +S + + ++ + KPK H + +++
Sbjct: 683 LSPRSHNTARLASISSFAKSAVMNSTSASGKPKSLHLFDSLNDDV 727
>SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1666
Score = 26.2 bits (55), Expect = 5.6
Identities = 14/64 (21%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +3
Query: 213 YHSQSHRLIANAVPTLNIGFSQQQPVEI-EVDENMPTLMQPLTSAQMTKVQQSSHSFPNL 389
Y Q L+ + + L + + I E EN P ++ + + Q +Q +H++ +L
Sbjct: 1406 YLEQHPMLLTDLLAALTPRIDHPRVIRIFEKSENTPLILNFMVAIQHLNIQAVNHAYNDL 1465
Query: 390 TVSM 401
+ M
Sbjct: 1466 LIEM 1469
>SPAC16E8.06c |nop12||RNA-binding protein Nop12|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 438
Score = 26.2 bits (55), Expect = 5.6
Identities = 20/90 (22%), Positives = 41/90 (45%)
Frame = +3
Query: 240 ANAVPTLNIGFSQQQPVEIEVDENMPTLMQPLTSAQMTKVQQSSHSFPNLTVSMPSATRN 419
+N PTLN+ FSQ +P+ V + L + + +V++ ++ ++ S T+
Sbjct: 23 SNVDPTLNLLFSQSKPIPKPVAKETTVL-----TKKDVEVEE-ANGVEEAAETIESDTKE 76
Query: 420 VANKAETNQSRRDSEDQDSADTSSQQVESL 509
V N ++ ++ + S D + E L
Sbjct: 77 VQNIKPKSKKKKKKLNDSSDDIEGKYFEEL 106
>SPAC22H10.09 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 646
Score = 26.2 bits (55), Expect = 5.6
Identities = 26/124 (20%), Positives = 53/124 (42%)
Frame = +3
Query: 60 DGPLHRFPKPQYPHLTKFNSWKSVLAKDVQDKGDIYIYNQIRICDRHFEKCYHSQSHRLI 239
DGP H+ K L N S+ +K D +++ + R + + + SH ++
Sbjct: 215 DGPYHKVEKL----LKSANIRSSLNSKTFNDFRTLFL-----LLIRDYSLFHGNSSHCML 265
Query: 240 ANAVPTLNIGFSQQQPVEIEVDENMPTLMQPLTSAQMTKVQQSSHSFPNLTVSMPSATRN 419
AN++ +I FS+ + EI + + Q + ++ S + +S+ SA +
Sbjct: 266 ANSMLPPSIAFSKMEKAEIFL--RLRAFFQLMEHIDNERITPSEQFLDKVFISLLSAKNS 323
Query: 420 VANK 431
+ K
Sbjct: 324 CSLK 327
>SPAC869.06c |||cation binding protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 25.8 bits (54), Expect = 7.5
Identities = 24/103 (23%), Positives = 39/103 (37%), Gaps = 1/103 (0%)
Frame = +3
Query: 372 HSFPNLTVSMPSATRNVANKAETNQSRRDSEDQDSADTSSQQVESLRTLQSTGAPIKKPK 551
HS V P + + + + + +D + + +S++ QS P
Sbjct: 67 HSVGEEIVVYPKFEKYLGEEGK-EMAEKDRHEHQLVKEMLYKFQSMKANQSNFIPALDEL 125
Query: 552 QEH-RCHTCEEEISDWDELEKHLIQHVSLPSTGIEELLLEYSP 677
E + H EEE D LEKHL + SL E ++ P
Sbjct: 126 MESLQKHIDEEEQHDIPFLEKHLSEEESLHMASSFERTKKFVP 168
>SPAC14C4.07 |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 644
Score = 25.8 bits (54), Expect = 7.5
Identities = 21/96 (21%), Positives = 40/96 (41%), Gaps = 1/96 (1%)
Frame = +3
Query: 216 HSQSHRLIANAVPTLNIGFSQQQPV-EIEVDENMPTLMQPLTSAQMTKVQQSSHSFPNLT 392
H H + + P++N F + P E E + P A+ + +SHS + T
Sbjct: 4 HDDDHTPLLISDPSVNKPFRSRTPSPEREYCSDCPL------QAKGSACNGNSHSLKHET 57
Query: 393 VSMPSATRNVANKAETNQSRRDSEDQDSADTSSQQV 500
S+ NVA + + + ++ DS S++ +
Sbjct: 58 NGASSSNNNVAKSSSHDSFKAKPKNYDSTSNSNEPI 93
>SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1334
Score = 25.8 bits (54), Expect = 7.5
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +1
Query: 427 IKLKQINPDEIVKIKIRPIPVL 492
+K K IN E++K+ RPIP+L
Sbjct: 878 VKPKTINKRELLKVFQRPIPLL 899
>SPBC1861.05 |||carbohydrate kinase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 747
Score = 25.8 bits (54), Expect = 7.5
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -1
Query: 154 LS*TSLARTDFQELNFVKCGYCGLGNRCNG 65
L+ +SL T ++ NF C Y + N CNG
Sbjct: 466 LTKSSLQHTIVEKSNFTSCSYTAI-NDCNG 494
>SPCC1739.03 |hrr1||Helicase Required for RNAi-mediated
heterochromatin assembly Hrr1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1015
Score = 25.8 bits (54), Expect = 7.5
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +1
Query: 328 SH*LLPK*QKCNSHHTVSQILLLVCHQQLEMSPIKLKQINPDEIVKIKI 474
SH +LP C ++H V QIL+ + HQ + + + +P EI + I
Sbjct: 416 SH-VLPILVACQTNHAVDQILIRLLHQGASVMRLGSRTKDP-EIAAVTI 462
>SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein
Zds1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 938
Score = 25.8 bits (54), Expect = 7.5
Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +3
Query: 384 NLTVSMPSATRN-VANKAETNQSRRDSEDQDSADTSSQQVES 506
N+T+S + N +AET+ ++D+DS+ + V S
Sbjct: 83 NITISNENNNENDTTEEAETSSGNEAADDEDSSSDAQSSVPS 124
>SPBC947.08c |||histone promoter control protein Hpc2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 338
Score = 25.4 bits (53), Expect = 9.9
Identities = 24/108 (22%), Positives = 48/108 (44%)
Frame = +3
Query: 240 ANAVPTLNIGFSQQQPVEIEVDENMPTLMQPLTSAQMTKVQQSSHSFPNLTVSMPSATRN 419
+++VP + G + ++ V++E + PL+ + + + H +S PSA N
Sbjct: 227 SSSVPKQSTGENTKKAVKLETPLTSTPPIPPLSEPKHSPATVNEH------ISPPSALTN 280
Query: 420 VANKAETNQSRRDSEDQDSADTSSQQVESLRTLQSTGAPIKKPKQEHR 563
+ + E S DQ +A S+ + + + S A + P EH+
Sbjct: 281 PSTE-ELKPSTSLPIDQGNASVVSKPTQQVSIVLSQNASL--PVDEHQ 325
>SPAC227.16c |||GINS complex subunit Psf3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 166
Score = 25.4 bits (53), Expect = 9.9
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +2
Query: 11 MMPSSSRXEVPFWL 52
M+P+ S+ E+PFWL
Sbjct: 33 MVPTGSKVELPFWL 46
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,458,113
Number of Sequences: 5004
Number of extensions: 73036
Number of successful extensions: 264
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 250
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 262
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 404442380
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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