Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_E09
(826 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1188 + 31579833-31579914,31580001-31580176,31580822-315809... 38 0.007
06_03_1516 + 30712208-30712780,30712984-30713139,30713819-307139... 33 0.36
03_05_0671 + 26608953-26609671,26609775-26610495 31 1.1
07_01_1098 - 10083800-10084447,10084523-10084792 31 1.5
02_05_0891 - 32554355-32555305 31 1.5
01_06_0823 + 32234588-32234936,32236354-32237093,32237260-322373... 30 1.9
11_01_0271 + 2039100-2041760 30 2.6
08_02_0824 + 21561699-21562415,21563294-21563362,21563424-215634... 29 3.4
07_03_1182 - 24610862-24611637,24612223-24612340,24612441-246141... 29 3.4
07_01_0024 + 159839-159923,160395-160442,160884-160895,161347-16... 29 3.4
06_01_1132 + 9346372-9346429,9347314-9348179,9348817-9349176 29 3.4
03_02_0595 + 9709131-9709688 29 3.4
06_01_0730 + 5370575-5370761,5371395-5371438,5372057-5372204,537... 29 4.5
02_05_0491 + 29470575-29471351,29471574-29471806,29472697-294728... 29 4.5
05_04_0379 + 20788286-20788705,20789626-20789778 29 5.9
02_05_0672 + 30775458-30775523,30775594-30775662,30775748-307757... 29 5.9
01_06_0954 - 33322951-33323606,33324213-33325014 29 5.9
01_05_0533 + 22997139-22997683,22998024-22998073,22998142-229981... 29 5.9
07_01_0718 + 5484553-5484601,5484836-5484933,5485028-5485078,548... 28 7.8
>04_04_1188 +
31579833-31579914,31580001-31580176,31580822-31580923,
31581015-31581245,31581821-31581922,31582092-31582184,
31582275-31582379,31582455-31582514,31582621-31582698,
31582778-31582924,31583011-31583109,31583178-31583267,
31583360-31583451,31583529-31583646,31583783-31583871,
31583998-31584088,31584203-31584294,31584442-31584749,
31584866-31584897
Length = 728
Score = 38.3 bits (85), Expect = 0.007
Identities = 30/110 (27%), Positives = 48/110 (43%)
Frame = +3
Query: 393 VSMPSATRNVANKAETNQSRRDSEDQDSADTSSQQVESLRTLQSTGAPIKKPKQEHRCHT 572
V P+A TN S++ D S+D+SS + ES + T AP+KKP
Sbjct: 156 VKKPAAPLKKPVALATNGSKKVETDSSSSDSSSDE-ESDEDDKKTAAPVKKPSVAAIQKK 214
Query: 573 CEEEISDWDELEKHLIQHVSLPSTGIEELLLEYSPPSGNENWSXEDEEPA 722
+E S + + + V + + + E S S +E+ S D+E A
Sbjct: 215 TQESDSSDSDSDSESDEDVPTKAPAVAKKKEESSESSDSESDSDSDDEAA 264
Score = 34.3 bits (75), Expect = 0.12
Identities = 39/152 (25%), Positives = 60/152 (39%), Gaps = 10/152 (6%)
Frame = +3
Query: 291 EIEVDENMPTLMQPLTSAQMTKVQQSSHSFPNLTVSMPSATRNVANKAETNQSRRDSEDQ 470
E EV +QP +AQ K + S S + + A + VA + S S
Sbjct: 84 EEEVKAQPKKTVQPKKAAQPAKEESSDDSSDDSSSDDEPAKKPVARPNKAALSTNSSSSD 143
Query: 471 DSADTSSQQVESLRTLQSTGAPIKKP--------KQEHRCHTCEEEISD--WDELEKHLI 620
DS+D S E ++ AP+KKP K+ + + SD DE +K
Sbjct: 144 DSSDESLSDDEPVK---KPAAPLKKPVALATNGSKKVETDSSSSDSSSDEESDEDDKKTA 200
Query: 621 QHVSLPSTGIEELLLEYSPPSGNENWSXEDEE 716
V PS + + S S +++ S DE+
Sbjct: 201 APVKKPSVAAIQKKTQESDSSDSDSDSESDED 232
>06_03_1516 +
30712208-30712780,30712984-30713139,30713819-30713985,
30714108-30714357,30714400-30715182,30715437-30715753,
30715775-30716036
Length = 835
Score = 32.7 bits (71), Expect = 0.36
Identities = 16/47 (34%), Positives = 29/47 (61%)
Frame = +3
Query: 396 SMPSATRNVANKAETNQSRRDSEDQDSADTSSQQVESLRTLQSTGAP 536
SMP+A +++ +A + ++Q S +SSQQ++S+ L ST +P
Sbjct: 330 SMPAAKKSIVERAVLGKEIICFKNQGSPSSSSQQLQSVPLLLSTSSP 376
>03_05_0671 + 26608953-26609671,26609775-26610495
Length = 479
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Frame = +3
Query: 111 FNSWKSVLAKDVQ-DKGDIYIYN--QIRICDRHFEKCYHSQSHRLIANAVPT 257
F+ +K V+ + Q ++G Y +N +I+ + F +CYHS+ H + A+ V T
Sbjct: 417 FHPYKEVIFLNRQMERGLAYHFNSSKIQYLGKTFPECYHSEVHEMYASFVYT 468
>07_01_1098 - 10083800-10084447,10084523-10084792
Length = 305
Score = 30.7 bits (66), Expect = 1.5
Identities = 21/100 (21%), Positives = 45/100 (45%)
Frame = +3
Query: 249 VPTLNIGFSQQQPVEIEVDENMPTLMQPLTSAQMTKVQQSSHSFPNLTVSMPSATRNVAN 428
VP+ +G+S + P++I+ E T +P +T + P +T T + A
Sbjct: 202 VPSPQLGYSMETPIQID-SEAERTDTKPEIEPDITDPSEDETPVPRITFLGGPRTLSTAR 260
Query: 429 KAETNQSRRDSEDQDSADTSSQQVESLRTLQSTGAPIKKP 548
K+ S++ D ++ ++ + LR +++ P+ P
Sbjct: 261 KSTRPPSKKPKPDPEA---TTSEPWGLRFARASDYPLPAP 297
>02_05_0891 - 32554355-32555305
Length = 316
Score = 30.7 bits (66), Expect = 1.5
Identities = 24/93 (25%), Positives = 46/93 (49%), Gaps = 13/93 (13%)
Frame = +3
Query: 405 SATRNVANKAETNQSRRDSEDQDSADTS-SQQVES----------LRTLQSTGAPIKKPK 551
SAT++ + + N+ DS D++ ++S S++ E+ + + G + PK
Sbjct: 73 SATKS-RDPPQENREEDDSSDEEEDESSESEKAEAPPPPPPNPAPKQGAEGNGPKVSSPK 131
Query: 552 QE--HRCHTCEEEISDWDELEKHLIQHVSLPST 644
++ HR + E+E+ + L H +H SLP T
Sbjct: 132 RQAFHRIWSTEDEVRILEALAAHRREHGSLPQT 164
>01_06_0823 +
32234588-32234936,32236354-32237093,32237260-32237343,
32237909-32239263,32240399-32240460,32240544-32241144,
32241229-32241310,32241778-32241840
Length = 1111
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = -1
Query: 403 GILTVRFGKLCDDCCTFVIWAEVNGCIRV 317
G + +R+ KLCD C T V+ +EV+ C+ V
Sbjct: 401 GWILLRYKKLCDSCRTDVV-SEVSSCLNV 428
>11_01_0271 + 2039100-2041760
Length = 886
Score = 29.9 bits (64), Expect = 2.6
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +3
Query: 516 LQSTGAPIKKPKQEHRCHTCEEEISD-WDE-LEKHLIQHVSLPSTGIEELLLEYSPPSG 686
L GAP+++ E HT +E D WDE L K+L+ +L + + + SPP G
Sbjct: 696 LSKLGAPLEEDAGERLPHTAADEPRDLWDEKLPKYLLLLAALAAAVTYQAAM--SPPGG 752
>08_02_0824 +
21561699-21562415,21563294-21563362,21563424-21563459,
21564533-21564600,21565259-21565277,21565662-21565763,
21566173-21566288,21566501-21566595,21568093-21568264,
21568413-21568493,21569732-21569801,21570106-21570132
Length = 523
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -1
Query: 385 FGKLCDDCCTFVIWAEVNGCIRVGIFSSTSISTG 284
F C+ C W +VNG R+G+F+S +I G
Sbjct: 452 FNHSCEPNCQLQKW-QVNGKTRLGVFASKAIEVG 484
>07_03_1182 -
24610862-24611637,24612223-24612340,24612441-24614120,
24614253-24614320,24615370-24615550
Length = 940
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 645 GIEELLLEYSPPSGNENWSXEDEEPAAVNKLSGL 746
G E +LL P +G E+WS + E P+ V ++ L
Sbjct: 872 GDERMLLVEDPLNGIEDWSFDSESPSTVLEIERL 905
>07_01_0024 + 159839-159923,160395-160442,160884-160895,161347-161427,
161530-161675,161918-161965,162054-162203,165647-165706,
165788-165859,165960-166409,166640-166839,167239-168236,
168676-168683,169057-169230,169341-169659,169748-169824,
169897-169966,170040-170111,170204-170418,170540-170665,
170751-171046,171133-171157,171163-171303,171400-171498,
171571-171702,171793-171912
Length = 1407
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +3
Query: 363 QSSHSFPNLTVSMPSATRNVANKAETNQSRRDSEDQDSA 479
+ S S TVS +A RNVANK ++ S+ +++D+ A
Sbjct: 1019 EHSRSASGPTVSAVAAVRNVANKIKSRLSQLNNDDKRGA 1057
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +3
Query: 384 NLTVSMPSATRNVANKAETNQSRRDSEDQDSADTSSQQ--VESLRTLQSTGAPIKKPKQE 557
NL + + A +N A+ E+N SEDQ +T+++Q ++ + G I K K++
Sbjct: 724 NLDLIIEDAAQNQASIDESNTVENTSEDQAEKETTNEQEDIQDPDIANTKGKKISKNKRD 783
>06_01_1132 + 9346372-9346429,9347314-9348179,9348817-9349176
Length = 427
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +3
Query: 195 RHFEKCYHSQSHRLIANAVPTLNIGFSQQQPVEIEVDENMPT 320
R FEK ++ + A A P + F+++ V+IEVD+ T
Sbjct: 372 RKFEKTIRYETRKAYAEARPRIKGRFAKRSDVQIEVDQMFST 413
>03_02_0595 + 9709131-9709688
Length = 185
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/43 (30%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Frame = +3
Query: 309 NMPTLMQPLTSAQMTKVQQSSHSF--PNLTVSMPSATRNVANK 431
N+ TLM+PL + ++++ P++ +S+P A +VA+K
Sbjct: 49 NLDTLMEPLDEPPLLVIEETEFPLPQPSMALSLPMALAHVADK 91
>06_01_0730 +
5370575-5370761,5371395-5371438,5372057-5372204,
5372289-5372397,5373349-5373863,5374571-5374808,
5375296-5375560,5375740-5375844,5375950-5376015,
5376562-5377020,5377267-5377464,5378149-5378211
Length = 798
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/72 (22%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +3
Query: 105 TKFNSWKSVLAKDVQDKGDIYIYNQIRICDRHFEKCYHSQSHRLIAN--AVPTL-NIGFS 275
T N+ V+ + + + ++ +C++ + C H H +I VP G S
Sbjct: 355 TDNNNGTDVITTSASNTENSNVLDENALCEKTSQACIHEVEHVIIPEHLRVPEYEQTGLS 414
Query: 276 QQQPVEIEVDEN 311
Q+PV++ V+++
Sbjct: 415 VQEPVQLVVEDD 426
>02_05_0491 + 29470575-29471351,29471574-29471806,29472697-29472856,
29473149-29473394,29473492-29473628,29473874-29474207,
29474283-29474444,29474717-29474791,29474866-29474966,
29475042-29475111,29475210-29475266,29475357-29475418,
29475505-29475577,29475663-29475884
Length = 902
Score = 29.1 bits (62), Expect = 4.5
Identities = 18/56 (32%), Positives = 26/56 (46%)
Frame = +3
Query: 402 PSATRNVANKAETNQSRRDSEDQDSADTSSQQVESLRTLQSTGAPIKKPKQEHRCH 569
P ANK +T+ S +S++ +S +TSS ES +S P K E H
Sbjct: 847 PPKEEESANKEKTDSSESESKEAESTETSS---ESAAPEESQSEPQKTDDLEPEAH 899
>05_04_0379 + 20788286-20788705,20789626-20789778
Length = 190
Score = 28.7 bits (61), Expect = 5.9
Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = -1
Query: 787 SCFILIRXF-FIVKPSPLNLFTAAGSSSSXDQFSFPEGGLYSKSSSS 650
S F+L+ F ++KPS + +++ SSSS + S +G + +SSSS
Sbjct: 73 SMFLLMAIFEHLIKPSLSSSSSSSSSSSSSSRASHGDGDGHGQSSSS 119
>02_05_0672 + 30775458-30775523,30775594-30775662,30775748-30775797,
30775869-30775929,30776016-30776381,30776542-30776754,
30776826-30777056,30777502-30777615,30777703-30778495,
30778535-30778905,30779007-30779378,30779448-30780438,
30781068-30781141,30781953-30782030,30782448-30782525
Length = 1308
Score = 28.7 bits (61), Expect = 5.9
Identities = 30/123 (24%), Positives = 54/123 (43%), Gaps = 2/123 (1%)
Frame = +3
Query: 387 LTVSMPSATRNVANKAETNQSRRDSEDQDSADTSSQQVESLRTLQSTGAPIKKPKQEHRC 566
L+ + P T+N + E+ Q DSED+D + Q+ + + P++ +
Sbjct: 862 LSFTNPFLTQNEFS-GESKQDNPDSEDKDRQERKRQKKLKAMLFELSENPVEFCRVNSLH 920
Query: 567 HTCEEEISDWDELEKHLIQHVSLPSTGIEELLLEYSPPSG-NENWSXE-DEEPAAVNKLS 740
EE+S +L K L++ + S EE ++ E W E D++P +N+
Sbjct: 921 LKTMEEMS---KLRKQLLRLIFHHSKFCEEFSWKFGVSEDVEEAWRHESDKKPMQLNEEE 977
Query: 741 GLG 749
LG
Sbjct: 978 LLG 980
>01_06_0954 - 33322951-33323606,33324213-33325014
Length = 485
Score = 28.7 bits (61), Expect = 5.9
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3
Query: 564 CHTCEEEISDWDELEKH 614
CH C E+ S W+ LE H
Sbjct: 245 CHRCGEQFSKWEALEAH 261
>01_05_0533 +
22997139-22997683,22998024-22998073,22998142-22998194,
22998286-22998303
Length = 221
Score = 28.7 bits (61), Expect = 5.9
Identities = 40/160 (25%), Positives = 69/160 (43%), Gaps = 3/160 (1%)
Frame = +3
Query: 138 KDVQDKGDIYIYNQIRICDRHFEKCYH--SQSHRLIANAVPTLNIGFSQQQPVEIEVDEN 311
KD + + +NQ R+ DR E+ YH S+ + P + G + +E +
Sbjct: 30 KDEEKPVKVSPWNQYRLVDREAEQVYHLASRKDQAPGKCAPFICFG---RAAAGLE-GAS 85
Query: 312 MPTLMQPLTSAQMTKVQQSSHSFPNLTVSMPSATRNVANKAETNQSRRDSEDQDSADTSS 491
P L TS + ++SS S T S T N + SRRDS + +
Sbjct: 86 PPKLSSGNTSGSSS--EESSASANEGTNG--SLTGNEKKGCLKSNSRRDSLEHCIVVSEG 141
Query: 492 QQV-ESLRTLQSTGAPIKKPKQEHRCHTCEEEISDWDELE 608
++ ESL +Q+ + +++ K + TC +E+ + E E
Sbjct: 142 EEPRESLEEVQTLKSGMERRKVQW-TDTCGKELFEIREFE 180
>07_01_0718 +
5484553-5484601,5484836-5484933,5485028-5485078,
5485744-5485857,5485887-5485937,5485938-5486138,
5486240-5486341,5486879-5486986,5487053-5487286,
5488250-5488500,5488592-5488763,5489165-5489320,
5489405-5489455,5489499-5489591,5489814-5490014,
5490105-5490236,5490308-5490481,5490755-5490994,
5491213-5491407
Length = 890
Score = 28.3 bits (60), Expect = 7.8
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = +3
Query: 99 HLTKFNSWKSVLAKDVQDKGDIYIYNQIRICDRHFEKCYHSQSHRLIANAVPTLN 263
HL + S L KD+ K D+Y N IR+ R + +Q R + A+ N
Sbjct: 118 HLLQVIIVTSSLMKDMNSKTDMYRANAIRVLCRIIDSTLLTQIERYLKQAIVDKN 172
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,046,543
Number of Sequences: 37544
Number of extensions: 458190
Number of successful extensions: 1324
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1277
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1324
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2268190812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -