Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_E09
(826 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S66936-1|AAB28820.1| 360|Caenorhabditis elegans Egl-43 protein. 36 0.047
S66757-1|AAB28819.1| 581|Caenorhabditis elegans Egl-43 protein. 36 0.047
U22832-3|AAA64508.2| 359|Caenorhabditis elegans Hypothetical pr... 33 0.25
AF068716-7|AAC17746.1| 384|Caenorhabditis elegans Hypothetical ... 33 0.25
Z68119-1|CAA92191.1| 523|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z75541-5|CAE17852.1| 291|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z74028-3|CAA98425.1| 1908|Caenorhabditis elegans Hypothetical pr... 29 3.1
AC024826-17|AAF60789.1| 662|Caenorhabditis elegans Hypothetical... 29 3.1
Z75543-13|CAI79192.1| 281|Caenorhabditis elegans Hypothetical p... 29 4.0
Z75543-12|CAA99874.4| 280|Caenorhabditis elegans Hypothetical p... 29 4.0
Z68160-2|CAA92290.2| 403|Caenorhabditis elegans Hypothetical pr... 29 4.0
AY728061-1|AAU43722.1| 281|Caenorhabditis elegans cadmium-induc... 29 4.0
AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical... 29 4.0
AL117195-6|CAB55013.2| 503|Caenorhabditis elegans Hypothetical ... 29 5.3
AC024813-2|ABE73329.1| 1027|Caenorhabditis elegans Est (ever sho... 29 5.3
AC024813-1|AAK27880.3| 1241|Caenorhabditis elegans Est (ever sho... 29 5.3
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 29 5.3
Z81529-12|CAB04303.1| 492|Caenorhabditis elegans Hypothetical p... 28 7.1
Z81051-8|CAB02869.1| 425|Caenorhabditis elegans Hypothetical pr... 28 7.1
AL132864-4|CAB63393.2| 240|Caenorhabditis elegans Hypothetical ... 28 7.1
AL023816-5|CAA19434.1| 492|Caenorhabditis elegans Hypothetical ... 28 7.1
AF077531-1|AAC64610.1| 374|Caenorhabditis elegans Hypothetical ... 28 7.1
Z79600-5|CAB01878.2| 412|Caenorhabditis elegans Hypothetical pr... 28 9.3
AL032637-13|CAA21615.1| 709|Caenorhabditis elegans Hypothetical... 28 9.3
AF520567-1|AAM75345.1| 412|Caenorhabditis elegans intraflagella... 28 9.3
AF038605-2|AAB92020.1| 698|Caenorhabditis elegans Hypothetical ... 28 9.3
>S66936-1|AAB28820.1| 360|Caenorhabditis elegans Egl-43 protein.
Length = 360
Score = 35.5 bits (78), Expect = 0.047
Identities = 25/106 (23%), Positives = 44/106 (41%)
Frame = +3
Query: 309 NMPTLMQPLTSAQMTKVQQSSHSFPNLTVSMPSATRNVANKAETNQSRRDSEDQDSADTS 488
N+ ++ T Q K Q SF +++ ++ RN+ NK T+ + + Q S S
Sbjct: 237 NLTRHLRTHTGEQPYKCQYCERSF-SISSNLQRHVRNIHNKPNTSLTPHNHHRQRSLHNS 295
Query: 489 SQQVESLRTLQSTGAPIKKPKQEHRCHTCEEEISDWDELEKHLIQH 626
+ + T+ + P RC CE L++HL +H
Sbjct: 296 TSTSTTTTTVHHP--LLHLPGTSFRCQKCERCFGQQTNLDRHLKKH 339
>S66757-1|AAB28819.1| 581|Caenorhabditis elegans Egl-43 protein.
Length = 581
Score = 35.5 bits (78), Expect = 0.047
Identities = 25/106 (23%), Positives = 44/106 (41%)
Frame = +3
Query: 309 NMPTLMQPLTSAQMTKVQQSSHSFPNLTVSMPSATRNVANKAETNQSRRDSEDQDSADTS 488
N+ ++ T Q K Q SF +++ ++ RN+ NK T+ + + Q S S
Sbjct: 458 NLTRHLRTHTGEQPYKCQYCERSF-SISSNLQRHVRNIHNKPNTSLTPHNHHRQRSLHNS 516
Query: 489 SQQVESLRTLQSTGAPIKKPKQEHRCHTCEEEISDWDELEKHLIQH 626
+ + T+ + P RC CE L++HL +H
Sbjct: 517 TSTSTTTTTVHHP--LLHLPGTSFRCQKCERCFGQQTNLDRHLKKH 560
>U22832-3|AAA64508.2| 359|Caenorhabditis elegans Hypothetical
protein C09F5.3 protein.
Length = 359
Score = 33.1 bits (72), Expect = 0.25
Identities = 27/118 (22%), Positives = 47/118 (39%), Gaps = 1/118 (0%)
Frame = +3
Query: 282 QPVEIEVDENMPT-LMQPLTSAQMTKVQQSSHSFPNLTVSMPSATRNVANKAETNQSRRD 458
QP + V + + QP S+ + + +++ S N S S + K E +
Sbjct: 27 QPCPVHVFKTLKVEYRQPHNSSHVKQEERADDSHSNSPASSKSIKQENLLKCELCSTVCS 86
Query: 459 SEDQDSADTSSQQVESLRTLQSTGAPIKKPKQEHRCHTCEEEISDWDELEKHLIQHVS 632
S Q + T S+ V + ST K+ C CE+ D+ + H+ H+S
Sbjct: 87 SISQLQSHTLSEHVPEKKPSISTSNSAPSTKRV-ACQQCEDTFEDFAQFAIHMKSHLS 143
>AF068716-7|AAC17746.1| 384|Caenorhabditis elegans Hypothetical
protein F26D11.2 protein.
Length = 384
Score = 33.1 bits (72), Expect = 0.25
Identities = 25/93 (26%), Positives = 41/93 (44%)
Frame = +3
Query: 279 QQPVEIEVDENMPTLMQPLTSAQMTKVQQSSHSFPNLTVSMPSATRNVANKAETNQSRRD 458
Q V IE D+N P + QPL + TK+ SHS PN + R + ++ T RR
Sbjct: 180 QNSVLIEEDDNYPAVRQPL---EPTKMMFMSHSEPNFLRGDYTIGREI-KRSPTKLRRRS 235
Query: 459 SEDQDSADTSSQQVESLRTLQSTGAPIKKPKQE 557
+ +T+ + E + +K+ K +
Sbjct: 236 RLTKAQLETAIKNAEKEARIAEMEKILKRRKAQ 268
>Z68119-1|CAA92191.1| 523|Caenorhabditis elegans Hypothetical
protein T18D3.1 protein.
Length = 523
Score = 31.1 bits (67), Expect = 1.0
Identities = 23/104 (22%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
Frame = +3
Query: 303 DENMPTLMQPLTSAQMTKVQQSSHSFPNLTVSMPSATRNVANKAETNQSRRDSEDQDSAD 482
D + P+ + + +K ++ H P+ T S S + + ++K ET + R+ ++++
Sbjct: 389 DGSKPSTSASASVSSSSKHKKDKHDIPS-TSSAASTSSSSSSKHETKEERKARKEKER-- 445
Query: 483 TSSQQVESLRTLQSTG-APIKKPKQEHRCHTCEEEISDWDELEK 611
++ E + G +KPK++ + H EEE ++ EK
Sbjct: 446 ---ERAEKKAKKEKDGHREEEKPKKKDKKHETEEERAERKRKEK 486
>Z75541-5|CAE17852.1| 291|Caenorhabditis elegans Hypothetical
protein F52B5.7 protein.
Length = 291
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 4/61 (6%)
Frame = +3
Query: 465 DQDSADTSSQQVESLRTLQSTGAPIKKPKQEHRCHTCEEEIS----DWDELEKHLIQHVS 632
DQ + +S ++ T T PIK+ +CH C I D+ + H I H S
Sbjct: 140 DQLQSSSSMTSTPAVNTSTITKTPIKRQNGAFQCHMCGAMIKAYHLDYYKRSNHAIIHTS 199
Query: 633 L 635
L
Sbjct: 200 L 200
>Z74028-3|CAA98425.1| 1908|Caenorhabditis elegans Hypothetical
protein C14C10.5 protein.
Length = 1908
Score = 29.5 bits (63), Expect = 3.1
Identities = 21/101 (20%), Positives = 45/101 (44%), Gaps = 4/101 (3%)
Frame = +3
Query: 417 NVANKAETNQSRRDSEDQDSADTSSQQVESLRTLQST--GAPIKKPKQEHRCHTCEE--E 584
++++ ++ ED D D + ++E+L + + K +++H C + +
Sbjct: 23 DLSSSGSVTEAEELDEDIDMEDLDTTELENLHSDEDCLEAEDADKKREKHFCKEIWQLKK 82
Query: 585 ISDWDELEKHLIQHVSLPSTGIEELLLEYSPPSGNENWSXE 707
+ ELE+ QH + G+ E +L SG +W+ E
Sbjct: 83 LPYGAELEEQANQHFLMIKKGLAESILLNDAASGFCHWTME 123
>AC024826-17|AAF60789.1| 662|Caenorhabditis elegans Hypothetical
protein Y55F3AM.14 protein.
Length = 662
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +3
Query: 522 STGAPIKKPKQEHRCHTCEEEISDWDELEKHLIQH 626
S+G+P +P++ H C C + S + LE H H
Sbjct: 92 SSGSPTGQPEKRHICTVCGKGFSYFSILESHKRSH 126
>Z75543-13|CAI79192.1| 281|Caenorhabditis elegans Hypothetical
protein K01D12.13b protein.
Length = 281
Score = 29.1 bits (62), Expect = 4.0
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +3
Query: 576 EEEISDWDELEKHLIQHVSLPSTGIEE 656
EE ISD D +E L QH LP +EE
Sbjct: 103 EEHISDSDLIEIRLRQHFKLPMLSLEE 129
>Z75543-12|CAA99874.4| 280|Caenorhabditis elegans Hypothetical
protein K01D12.13a protein.
Length = 280
Score = 29.1 bits (62), Expect = 4.0
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +3
Query: 576 EEEISDWDELEKHLIQHVSLPSTGIEE 656
EE ISD D +E L QH LP +EE
Sbjct: 102 EEHISDSDLIEIRLRQHFKLPMLSLEE 128
>Z68160-2|CAA92290.2| 403|Caenorhabditis elegans Hypothetical
protein D1046.2 protein.
Length = 403
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = +3
Query: 486 SSQQVESLRTLQSTGAPIKKPKQEHRCHTCEEEISDWDELEKHLIQHVSLPSTGIEEL 659
+ QQ E ++ + G P K K H C C E L HL + S P ++E+
Sbjct: 97 TKQQCEMMKQQKRLGRPNPKRKSLHSCENCGMEFITKTGLTSHLKKDNS-PCARVDEM 153
>AY728061-1|AAU43722.1| 281|Caenorhabditis elegans
cadmium-inducible lysosomal proteinCDR-7 protein.
Length = 281
Score = 29.1 bits (62), Expect = 4.0
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +3
Query: 576 EEEISDWDELEKHLIQHVSLPSTGIEE 656
EE ISD D +E L QH LP +EE
Sbjct: 103 EEHISDSDLIEIRLRQHFKLPMLSLEE 129
>AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical
protein K07H8.10 protein.
Length = 798
Score = 29.1 bits (62), Expect = 4.0
Identities = 19/91 (20%), Positives = 38/91 (41%), Gaps = 1/91 (1%)
Frame = +3
Query: 342 AQMTKVQQSSHSFPNLTVSMPSATRNVAN-KAETNQSRRDSEDQDSADTSSQQVESLRTL 518
A T V + + + P+ + +A +V + + D ED++ + ++ E +
Sbjct: 346 ATPTTVDKKAPATPHPAKTSKNAAGDVPKLNFDDDSDEEDEEDEEVEEEDEEEEEEEEDV 405
Query: 519 QSTGAPIKKPKQEHRCHTCEEEISDWDELEK 611
+ AP+ K EE+ D DE E+
Sbjct: 406 PAKKAPVLKQSLSQIAQAIEEDSDDEDEDEE 436
>AL117195-6|CAB55013.2| 503|Caenorhabditis elegans Hypothetical
protein Y57A10A.8 protein.
Length = 503
Score = 28.7 bits (61), Expect = 5.3
Identities = 20/76 (26%), Positives = 36/76 (47%)
Frame = +3
Query: 435 ETNQSRRDSEDQDSADTSSQQVESLRTLQSTGAPIKKPKQEHRCHTCEEEISDWDELEKH 614
+ + + D E+ ++ + S+ +L+S + +E R C EIS+ DEL KH
Sbjct: 339 DVSYNNYDQEEVENRNVRLSIASSMPSLESNVIKLNDFLKEVRKFLCFLEISELDEL-KH 397
Query: 615 LIQHVSLPSTGIEELL 662
I+ + + G E L
Sbjct: 398 QIKESVVQTAGANENL 413
>AC024813-2|ABE73329.1| 1027|Caenorhabditis elegans Est (ever
shorter telomeres) homologprotein 1, isoform c protein.
Length = 1027
Score = 28.7 bits (61), Expect = 5.3
Identities = 19/70 (27%), Positives = 31/70 (44%)
Frame = +3
Query: 336 TSAQMTKVQQSSHSFPNLTVSMPSATRNVANKAETNQSRRDSEDQDSADTSSQQVESLRT 515
T A + +QSS P +AN+AE N+ R++ D++ Q E
Sbjct: 282 TEAGGNRNRQSSEEKPRTYQKRSQNQSEMANRAEINRRRQEDIDRNE---GKQIREISEK 338
Query: 516 LQSTGAPIKK 545
++ AP+KK
Sbjct: 339 IEKLSAPVKK 348
>AC024813-1|AAK27880.3| 1241|Caenorhabditis elegans Est (ever
shorter telomeres) homologprotein 1, isoform a protein.
Length = 1241
Score = 28.7 bits (61), Expect = 5.3
Identities = 19/70 (27%), Positives = 31/70 (44%)
Frame = +3
Query: 336 TSAQMTKVQQSSHSFPNLTVSMPSATRNVANKAETNQSRRDSEDQDSADTSSQQVESLRT 515
T A + +QSS P +AN+AE N+ R++ D++ Q E
Sbjct: 439 TEAGGNRNRQSSEEKPRTYQKRSQNQSEMANRAEINRRRQEDIDRNE---GKQIREISEK 495
Query: 516 LQSTGAPIKK 545
++ AP+KK
Sbjct: 496 IEKLSAPVKK 505
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 28.7 bits (61), Expect = 5.3
Identities = 23/97 (23%), Positives = 44/97 (45%), Gaps = 10/97 (10%)
Frame = +3
Query: 297 EVDENMPTLMQPLTSAQMTKVQQSSHSFPNLTVSMP----------SATRNVANKAETNQ 446
E DE++ T+ +P + K ++++ N+T+S SA + + NK
Sbjct: 554 EDDEDIFTVKKPTGEPEQIKEEEAAEKISNITISKTKPLKKAVTKVSAAKKILNKKLKVN 613
Query: 447 SRRDSEDQDSADTSSQQVESLRTLQSTGAPIKKPKQE 557
+++ +D D + E T+ S G I+K +QE
Sbjct: 614 TKKTFGAED--DELEELEEGPSTITSYGLDIEKARQE 648
>Z81529-12|CAB04303.1| 492|Caenorhabditis elegans Hypothetical
protein T05G11.1 protein.
Length = 492
Score = 28.3 bits (60), Expect = 7.1
Identities = 26/92 (28%), Positives = 37/92 (40%)
Frame = +3
Query: 339 SAQMTKVQQSSHSFPNLTVSMPSATRNVANKAETNQSRRDSEDQDSADTSSQQVESLRTL 518
SA T Q S P+ S PS +A + S E +SAD SS + RTL
Sbjct: 114 SALNTDPQNGSDDVPH---SSPSPVPMIAENSIIQASSLKMEPIESADRSSASTSTPRTL 170
Query: 519 QSTGAPIKKPKQEHRCHTCEEEISDWDELEKH 614
S P+++ C C ++ L +H
Sbjct: 171 VS-----GTPREKIPCGFCGKDFFHEGSLREH 197
>Z81051-8|CAB02869.1| 425|Caenorhabditis elegans Hypothetical
protein C55A6.9 protein.
Length = 425
Score = 28.3 bits (60), Expect = 7.1
Identities = 36/157 (22%), Positives = 62/157 (39%), Gaps = 18/157 (11%)
Frame = +3
Query: 213 YHSQSHRLIANAVPTLNIGFSQ-----QQPVEIEVDENMPTLMQPLTSAQM--TKVQQSS 371
Y H +I + LN+ + P+E E+DE L++ +A++ + QQ S
Sbjct: 58 YRDYKHAVICDDDMGLNVDLIDLKKYDEDPIETEIDEKDNILLEDDGAAKLIAKRSQQHS 117
Query: 372 HSFPNLTVSMPSATR-----NVANKAETNQSRRDSEDQDSADTSSQQVESLRTLQSTGAP 536
P + + +T A++ ET ++Q D + + + T
Sbjct: 118 KLVPWMRKTEYISTEFNRFGVTADRQETKLGYNLKKNQQVEDMYRDKQSQIDAINKTFED 177
Query: 537 IKKPKQEH----RCHTCEEE--ISDWDELEKHLIQHV 629
++KP +EH EE D+D KHL HV
Sbjct: 178 VRKPVKEHYSKKGVKAVEESFVFPDFDHW-KHLFAHV 213
>AL132864-4|CAB63393.2| 240|Caenorhabditis elegans Hypothetical
protein Y53H1A.2 protein.
Length = 240
Score = 28.3 bits (60), Expect = 7.1
Identities = 31/148 (20%), Positives = 53/148 (35%), Gaps = 14/148 (9%)
Frame = +3
Query: 330 PLTSAQMTKVQQSSHSFPNLTVSMPSATRN--VANKAETNQSRRDSEDQDSAD------- 482
P S Q SH P N ++ K+E + D ED +
Sbjct: 83 PPQSVQQAHYSNLSHFHPRNPEFSQEIVENRVISPKSEHPEEIEDHEDDEDGQIENRIKK 142
Query: 483 -TSSQQVESLRTLQSTGAPIKKPKQEHRCHTCEEEISDWDELEKHLIQHVSLPSTGIEEL 659
++++ L S K K +H C C ++ + L+ H++ H + + ++
Sbjct: 143 FVEAKKIVVCSLLASPKTFSTKKKTKHNCPECPKKYTSERRLKHHIVVHRNPDAYKCQKC 202
Query: 660 LLEY-SPPSGNENWSXE---DEEPAAVN 731
Y SP S +W DE P +N
Sbjct: 203 GYCYQSPDSLRRHWKKTPNCDEFPPKIN 230
>AL023816-5|CAA19434.1| 492|Caenorhabditis elegans Hypothetical
protein T05G11.1 protein.
Length = 492
Score = 28.3 bits (60), Expect = 7.1
Identities = 26/92 (28%), Positives = 37/92 (40%)
Frame = +3
Query: 339 SAQMTKVQQSSHSFPNLTVSMPSATRNVANKAETNQSRRDSEDQDSADTSSQQVESLRTL 518
SA T Q S P+ S PS +A + S E +SAD SS + RTL
Sbjct: 114 SALNTDPQNGSDDVPH---SSPSPVPMIAENSIIQASSLKMEPIESADRSSASTSTPRTL 170
Query: 519 QSTGAPIKKPKQEHRCHTCEEEISDWDELEKH 614
S P+++ C C ++ L +H
Sbjct: 171 VS-----GTPREKIPCGFCGKDFFHEGSLREH 197
>AF077531-1|AAC64610.1| 374|Caenorhabditis elegans Hypothetical
protein F13C5.2 protein.
Length = 374
Score = 28.3 bits (60), Expect = 7.1
Identities = 23/111 (20%), Positives = 51/111 (45%), Gaps = 2/111 (1%)
Frame = +3
Query: 417 NVANKAETNQSRRDSE-DQDSADTS-SQQVESLRTLQSTGAPIKKPKQEHRCHTCEEEIS 590
N ++ E ++ ++ E +D+A+ +++ E + ++ +QE + EE+
Sbjct: 242 NEDDEEEVDEKEKEEEVKEDNAEEKPAEEPEQPDEKEEEDHEDEREEQEEEDSSDEEDGL 301
Query: 591 DWDELEKHLIQHVSLPSTGIEELLLEYSPPSGNENWSXEDEEPAAVNKLSG 743
D D++ +H+ S P E + P E+ S + E A+ ++SG
Sbjct: 302 DDDDVRRHIPASTSAPVAKHPEAAM---PEPAAEHSSIQSSEAQALGEISG 349
>Z79600-5|CAB01878.2| 412|Caenorhabditis elegans Hypothetical
protein F59C6.7 protein.
Length = 412
Score = 27.9 bits (59), Expect = 9.3
Identities = 25/113 (22%), Positives = 48/113 (42%)
Frame = +3
Query: 216 HSQSHRLIANAVPTLNIGFSQQQPVEIEVDENMPTLMQPLTSAQMTKVQQSSHSFPNLTV 395
H + + N P L+ S+ +E + + ++ M+K ++++ + L
Sbjct: 264 HKNVEQKVGNVGPYLD-NMSKDIAKALERIASREKSLNSQLASMMSKFRRATDTRAELRE 322
Query: 396 SMPSATRNVANKAETNQSRRDSEDQDSADTSSQQVESLRTLQSTGAPIKKPKQ 554
+A+ V+++ ET D +Q QQ+E S GAP+ K KQ
Sbjct: 323 KYKAASVGVSSRTETLDRISDDIEQ-----LKQQIEEQGAKSSDGAPLVKIKQ 370
>AL032637-13|CAA21615.1| 709|Caenorhabditis elegans Hypothetical
protein Y43F8C.14 protein.
Length = 709
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/48 (27%), Positives = 27/48 (56%)
Frame = +1
Query: 355 KCNSHHTVSQILLLVCHQQLEMSPIKLKQINPDEIVKIKIRPIPVLNR 498
KC SQ +LL+C ++L+ ++L+++ + + + P P +NR
Sbjct: 361 KCPMQELASQRVLLICRERLK---VQLEEVRRLQAMTVVRHPPPPINR 405
>AF520567-1|AAM75345.1| 412|Caenorhabditis elegans intraflagellar
transport proteinCHE-13 protein.
Length = 412
Score = 27.9 bits (59), Expect = 9.3
Identities = 25/113 (22%), Positives = 48/113 (42%)
Frame = +3
Query: 216 HSQSHRLIANAVPTLNIGFSQQQPVEIEVDENMPTLMQPLTSAQMTKVQQSSHSFPNLTV 395
H + + N P L+ S+ +E + + ++ M+K ++++ + L
Sbjct: 264 HKNVEQKVGNVGPYLD-NMSKDIAKALERIASREKSLNSQLASMMSKFRRATDTRAELRE 322
Query: 396 SMPSATRNVANKAETNQSRRDSEDQDSADTSSQQVESLRTLQSTGAPIKKPKQ 554
+A+ V+++ ET D +Q QQ+E S GAP+ K KQ
Sbjct: 323 KYKAASVGVSSRTETLDRISDDIEQ-----LKQQIEEQGAKSSDGAPLVKIKQ 370
>AF038605-2|AAB92020.1| 698|Caenorhabditis elegans Hypothetical
protein C02B10.5 protein.
Length = 698
Score = 27.9 bits (59), Expect = 9.3
Identities = 20/93 (21%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
Frame = +3
Query: 303 DENM-PTLMQPLTSAQMTKVQQSSHSFPNLTVSMPSATRNVANKAETNQSRRDSEDQDSA 479
DE++ PT L +++ K +++ + + T++MPS ++++ ++ R +
Sbjct: 22 DEDVTPTASPSLVKSEVVKEEENDDA--DRTLTMPSTSQDIQPESSPAHGR--------S 71
Query: 480 DTSSQQVESLRTLQSTGAPIKKPKQEHRCHTCE 578
SSQ++ S T++ P++ +QE+ T +
Sbjct: 72 APSSQEITSPPTVRRVATPLEAAEQEYYYFTTD 104
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,246,990
Number of Sequences: 27780
Number of extensions: 416704
Number of successful extensions: 1414
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1317
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1413
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2040452812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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