Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_E08
(769 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 289 7e-77
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 285 1e-75
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 284 1e-75
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 280 3e-74
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 274 2e-72
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 267 2e-70
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 261 1e-68
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 256 6e-67
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 255 8e-67
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 242 8e-63
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 236 5e-61
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 234 2e-60
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 229 8e-59
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 222 7e-57
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 222 7e-57
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 220 3e-56
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 212 7e-54
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 190 3e-47
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 185 9e-46
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 182 9e-45
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 179 6e-44
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 174 2e-42
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 171 1e-41
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 166 6e-40
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 165 1e-39
UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2; Br... 164 2e-39
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 162 1e-38
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 162 1e-38
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 152 1e-35
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 149 1e-34
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 147 2e-34
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 147 3e-34
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 143 4e-33
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 143 5e-33
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 142 7e-33
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 140 5e-32
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 140 5e-32
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 139 6e-32
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 138 2e-31
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 137 2e-31
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 136 4e-31
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 136 4e-31
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 135 1e-30
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 134 2e-30
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 132 7e-30
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 132 1e-29
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 131 2e-29
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 130 3e-29
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 128 1e-28
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 128 2e-28
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 128 2e-28
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 127 3e-28
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 127 3e-28
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 126 6e-28
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 125 1e-27
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 123 4e-27
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 122 7e-27
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 122 7e-27
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 122 1e-26
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 121 2e-26
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 121 2e-26
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 121 2e-26
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 120 4e-26
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 120 4e-26
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 120 5e-26
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 118 2e-25
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 117 4e-25
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 116 5e-25
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 115 1e-24
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 115 1e-24
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 114 2e-24
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 112 8e-24
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 111 1e-23
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 111 1e-23
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 110 4e-23
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 110 4e-23
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 109 1e-22
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 107 2e-22
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 106 7e-22
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 106 7e-22
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 105 1e-21
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 103 5e-21
UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4; Ch... 102 1e-20
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 100 5e-20
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 99 6e-20
UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1; Ch... 97 4e-19
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 91 4e-17
UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6; Di... 85 1e-15
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 85 2e-15
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 83 1e-14
UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 82 1e-14
UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1; Ha... 73 6e-12
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 73 8e-12
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 70 6e-11
UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2; To... 69 2e-10
UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome ox... 68 2e-10
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 67 4e-10
UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1; ... 65 2e-09
UniRef50_Q6RCN4 Cluster: Cytochrome c oxidase subunit I; n=1; Bu... 62 1e-08
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 60 4e-08
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 59 1e-07
UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1; Ta... 57 6e-07
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 57 6e-07
UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820... 55 2e-06
UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3; Ch... 51 4e-05
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 48 2e-04
UniRef50_Q9MFX8 Cluster: Cytochrome oxidase I; n=5; Echinometra ... 46 8e-04
UniRef50_Q5VI63 Cluster: SoxB; n=3; Sulfolobaceae|Rep: SoxB - Ac... 46 0.001
UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7; Locu... 44 0.004
UniRef50_Q9TAP7 Cluster: Cytochrome oxidase subunit 1; n=1; Clon... 43 0.010
UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 42 0.022
UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2; Eu... 41 0.039
UniRef50_Q981A5 Cluster: Heme bearing subunit I of the terminal ... 40 0.090
UniRef50_A3H8Y4 Cluster: Cytochrome-c oxidase precursor; n=1; Ca... 40 0.090
UniRef50_Q8ZXC1 Cluster: Cytochrome C oxidase subunit I; n=3; Py... 38 0.21
UniRef50_Q9YBH5 Cluster: Cytochrome c oxidase (Ba3-type) subunit... 38 0.36
UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 36 0.84
UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4; C... 36 1.5
UniRef50_Q2Y5N3 Cluster: Integral membrane proteins containing u... 35 2.6
UniRef50_Q48874 Cluster: SakB; n=2; Lactobacillus sakei|Rep: Sak... 33 7.8
UniRef50_Q5CTJ9 Cluster: Cation-transporting ATPase; n=2; Crypto... 33 7.8
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 33 7.8
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 289 bits (708), Expect = 7e-77
Identities = 144/242 (59%), Positives = 166/242 (68%)
Frame = +1
Query: 43 VXNGAGTG*TVYPPLSSNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 222
V GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG+SS S
Sbjct: 118 VEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTTINMKPPTIS 177
Query: 223 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 402
Q PLFV AV +TA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF F
Sbjct: 178 QYQTPLFVWAVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWF 237
Query: 403 FGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGI 582
FGHPEVYILILPGFGIISH+++ GKKE F FIV AHH+FTVG+
Sbjct: 238 FGHPEVYILILPGFGIISHVVAYYAGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVGM 297
Query: 583 DIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVI 762
D+DTRAYFTSAT+IIA+PTG+K+F LAT+HG I + +L LGF+FLFTVGGLTG++
Sbjct: 298 DVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGAIKWETPMLWALGFIFLFTVGGLTGIV 357
Query: 763 XA 768
A
Sbjct: 358 LA 359
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 285 bits (698), Expect = 1e-75
Identities = 141/242 (58%), Positives = 166/242 (68%)
Frame = +1
Query: 43 VXNGAGTG*TVYPPLSSNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 222
V GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG+SS +
Sbjct: 118 VEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAIT 177
Query: 223 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 402
Q PLFV +V +TA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF F
Sbjct: 178 QYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWF 237
Query: 403 FGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGI 582
FGHPEVYILILPGFG+ISH+++ GKKE F FIV AHH+FTVG+
Sbjct: 238 FGHPEVYILILPGFGMISHVVTYYAGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVGM 297
Query: 583 DIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVI 762
D+DTRAYFTSAT+IIA+PTG+K+F LAT+HG I + +L LGF+FLFTVGGLTG++
Sbjct: 298 DVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGAIKWETPMLWALGFIFLFTVGGLTGIV 357
Query: 763 XA 768
A
Sbjct: 358 LA 359
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 284 bits (697), Expect = 1e-75
Identities = 141/242 (58%), Positives = 167/242 (69%)
Frame = +1
Query: 43 VXNGAGTG*TVYPPLSSNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 222
V GAGTG TVYPPL+ N +H G SVDL IFSLHLAG+SS +
Sbjct: 118 VEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMT 177
Query: 223 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 402
Q PLFV +V ITA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF F
Sbjct: 178 QYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWF 237
Query: 403 FGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGI 582
FGHPEVYILILPGFG+ISHI++ GKKE F FIV AHH+FTVG+
Sbjct: 238 FGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGM 297
Query: 583 DIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVI 762
D+DTRAYFTSAT+IIA+PTG+K+F LAT+HG+ + ++ +L LGF+FLFTVGGLTG++
Sbjct: 298 DVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSNMKWSAAVLWALGFIFLFTVGGLTGIV 357
Query: 763 XA 768
A
Sbjct: 358 LA 359
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 280 bits (686), Expect = 3e-74
Identities = 141/237 (59%), Positives = 162/237 (68%)
Frame = +1
Query: 52 GAGTG*TVYPPLSSNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQ 231
G GTG TVYPPLS + H G SVDL IFSLHLAG SS + D+
Sbjct: 105 GVGTGWTVYPPLSLILGHGGMSVDLGIFSLHLAGASSIMGAVNFITTILNMRSNLFNMDK 164
Query: 232 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 411
+ LF +V ITA AGAIT+LLTDRN+NTSFFDP+GGGDPILYQHLF FFGH
Sbjct: 165 MSLFSWSVFITAILLLLSLPVLAGAITMLLTDRNMNTSFFDPSGGGDPILYQHLFWFFGH 224
Query: 412 PEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDID 591
PEVYILILPGFGIISH+I E GKKETF FIV AHH+FT+G+D+D
Sbjct: 225 PEVYILILPGFGIISHMIFNESGKKETFGMLGMIYAMLTIGFLGFIVWAHHMFTIGMDVD 284
Query: 592 TRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVI 762
TRAYFTSAT+IIA+PTGIKIF +AT G ++ N IL +GF+FLFTVGGLTGV+
Sbjct: 285 TRAYFTSATMIIAIPTGIKIFSWMATFSGVKLMNNLMILWTMGFIFLFTVGGLTGVV 341
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 274 bits (672), Expect = 2e-72
Identities = 138/239 (57%), Positives = 164/239 (68%)
Frame = +1
Query: 52 GAGTG*TVYPPLSSNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQ 231
G+GTG TVYPPLS +H G +VDLAIFSLHL+G+SS + +
Sbjct: 124 GSGTGWTVYPPLSGITSHSGGAVDLAIFSLHLSGVSSILGSINFITTIFNMRGPGMTMHR 183
Query: 232 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 411
LPLFV +V +TAF AGAIT+LLTDRN NT+FFDPAGGGDPILYQHLF FFGH
Sbjct: 184 LPLFVWSVLVTAFLLLLSLPVLAGAITMLLTDRNFNTTFFDPAGGGDPILYQHLFWFFGH 243
Query: 412 PEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDID 591
PEVYILILPGFGIISHI+S G K F F+V AHH+FTVG+D+D
Sbjct: 244 PEVYILILPGFGIISHIVSTFSG-KPVFGYLGMVYAMISIGVLGFLVWAHHMFTVGLDVD 302
Query: 592 TRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVIXA 768
TRAYFT+AT+IIAVPTGIKIF +AT+ G I Y +L +GF+FLFT+GGLTG++ A
Sbjct: 303 TRAYFTAATMIIAVPTGIKIFSWIATMWGGSIQYKTPMLFAVGFIFLFTIGGLTGIVLA 361
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 267 bits (654), Expect = 2e-70
Identities = 136/242 (56%), Positives = 162/242 (66%)
Frame = +1
Query: 43 VXNGAGTG*TVYPPLSSNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 222
V GAGTG TVYPPLS +H G SVDLAIFSLHL+GISS +
Sbjct: 118 VEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMT 177
Query: 223 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 402
+LPLFV A+ +TA AGAIT+LLTDRN NTSF+DPAGGGDPILYQHLF F
Sbjct: 178 LHKLPLFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLFWF 237
Query: 403 FGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGI 582
FGHPEVYILI+PGFG++SHI+S G K F F+V +HH++ VG+
Sbjct: 238 FGHPEVYILIIPGFGMVSHIVSAFSG-KPVFGYLGMVYAMFSIGILGFLVWSHHMYAVGL 296
Query: 583 DIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVI 762
D+DTRAYFT+AT+IIAVPTGIKIF LAT++G + +L LGF+ LFT+GGLTGVI
Sbjct: 297 DVDTRAYFTAATMIIAVPTGIKIFSWLATLYGGSLRITTPMLFALGFIALFTIGGLTGVI 356
Query: 763 XA 768
A
Sbjct: 357 LA 358
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 261 bits (640), Expect = 1e-68
Identities = 133/239 (55%), Positives = 161/239 (67%)
Frame = +1
Query: 52 GAGTG*TVYPPLSSNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQ 231
G GTG TVYPPLSS +H G +VDLAIFSLH++G SS S +
Sbjct: 129 GVGTGWTVYPPLSSIQSHSGGAVDLAIFSLHISGASSILGAVNFISTILNMRSPGQSMYR 188
Query: 232 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 411
+PLFV ++ +TAF AGAIT+LLTDRN NTSFFD +GGGDPILYQHLF FFGH
Sbjct: 189 IPLFVWSILVTAFLLLLAVPVLAGAITMLLTDRNFNTSFFDASGGGDPILYQHLFWFFGH 248
Query: 412 PEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDID 591
PEVYILILPGFG+ISHI+S +K F FIV AHH++TVG+D+D
Sbjct: 249 PEVYILILPGFGMISHIVS-TFSRKPVFGYIGMVYAMVSIGVLGFIVWAHHMYTVGLDVD 307
Query: 592 TRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVIXA 768
TRAYFT+AT+IIAVPTGIKIF +ATI I+ +L +GF+FLFT+GGLTG++ A
Sbjct: 308 TRAYFTAATMIIAVPTGIKIFSWIATIWEGSIHLKTPMLFAIGFIFLFTIGGLTGIVLA 366
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 256 bits (626), Expect = 6e-67
Identities = 133/242 (54%), Positives = 156/242 (64%)
Frame = +1
Query: 43 VXNGAGTG*TVYPPLSSNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 222
V +GAGTG TVYPPLSS AH G SVDLAIFSLHL ISS S
Sbjct: 119 VESGAGTGWTVYPPLSSIQAHSGPSVDLAIFSLHLTSISSLLGAINFIVTTLNMRTNGMS 178
Query: 223 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 402
++PLFV A+ ITAF + IT+LL DRN NTSFF+ AGGGDPI YQH F F
Sbjct: 179 MHKMPLFVWAIFITAFLLLLSLPVLSAGITMLLMDRNFNTSFFEVAGGGDPIFYQHAFWF 238
Query: 403 FGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGI 582
FGHPEVYILI+PGFGI+SHI+S KK F F+V +HH++ VG+
Sbjct: 239 FGHPEVYILIIPGFGIVSHIVS-TYSKKPVFGEISMVYAMASIGLLGFLVWSHHMYIVGL 297
Query: 583 DIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVI 762
D DTRAYFTSAT+IIA+PTGIKIF LATI+G I ++ + F+FLFTVGGLTGV+
Sbjct: 298 DADTRAYFTSATMIIAIPTGIKIFSWLATIYGGSIRLAVPMMFAIAFLFLFTVGGLTGVV 357
Query: 763 XA 768
A
Sbjct: 358 LA 359
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 255 bits (625), Expect = 8e-67
Identities = 131/242 (54%), Positives = 158/242 (65%)
Frame = +1
Query: 43 VXNGAGTG*TVYPPLSSNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 222
+ NG GTG T+YPPLS +H G SVDLAIF LHL+GISS
Sbjct: 119 IENGVGTGWTLYPPLSGIQSHSGPSVDLAIFGLHLSGISSLLGAMNFMTTTFNMRSPGIR 178
Query: 223 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 402
+L LF AV ITA AG IT++LTDRN NTSFF+ AGGGDPILYQHLF F
Sbjct: 179 LHKLILFAWAVVITAVLLLLSLPVLAGGITMVLTDRNFNTSFFEVAGGGDPILYQHLFWF 238
Query: 403 FGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGI 582
FGHPEVYILI+PGFGIIS IS K F F+V +HH++TVG+
Sbjct: 239 FGHPEVYILIIPGFGIISTTIS-ANSNKSVFGYLGMVYAMCSIGILGFVVWSHHMYTVGL 297
Query: 583 DIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVI 762
D+DTRAYFT+AT+IIAVPTGIKIF LAT +G +++ P++L LGFVF+FT+GGL+GV+
Sbjct: 298 DVDTRAYFTAATLIIAVPTGIKIFSWLATCYGGSLHFIPSLLFALGFVFMFTIGGLSGVV 357
Query: 763 XA 768
A
Sbjct: 358 LA 359
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 242 bits (592), Expect = 8e-63
Identities = 125/242 (51%), Positives = 153/242 (63%)
Frame = +1
Query: 43 VXNGAGTG*TVYPPLSSNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 222
+ NG GTG T+YPPLS +H VDL IF LHL+GISS
Sbjct: 145 IENGVGTGWTLYPPLSGIQSHSSMGVDLGIFGLHLSGISSLLGAINFIATLLNMRSPGIK 204
Query: 223 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 402
+L LF AV ITA A AIT+LLTDRNLNTSF++ AGGGD ILYQHLF F
Sbjct: 205 LHKLALFGWAVVITAVLLLLSLPVLAAAITMLLTDRNLNTSFYELAGGGDAILYQHLFWF 264
Query: 403 FGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGI 582
FGHPEVYILI+PGFGIIS +IS K F FIV +HH++TVG+
Sbjct: 265 FGHPEVYILIIPGFGIISTVIS-ANSNKNVFGYLGMVYAMMSIGLLGFIVWSHHMYTVGL 323
Query: 583 DIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVI 762
D+DTRAYFT+AT+IIA+PTG+KIF LAT +G +++ +L LGFV +FT+GGL+GV+
Sbjct: 324 DVDTRAYFTAATLIIAIPTGVKIFSWLATCYGGSLHFTTPMLFALGFVVMFTIGGLSGVV 383
Query: 763 XA 768
A
Sbjct: 384 LA 385
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 236 bits (577), Expect = 5e-61
Identities = 124/238 (52%), Positives = 147/238 (61%), Gaps = 1/238 (0%)
Frame = +1
Query: 52 GAGTG*TVYPPLSSNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQ 231
G GTG TVYPPLSS +H G SVDL IFS HL GI S
Sbjct: 125 GPGTGWTVYPPLSSLQSHSGASVDLMIFSFHLVGIGSIVAAINFICTIFYYKNEAMFNKD 184
Query: 232 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 411
LPLFV +V +T+F A AIT+LL DRN NTSF+DP GGGD +LYQHLF FFGH
Sbjct: 185 LPLFVWSVAVTSFLVIVAIPVLAAAITLLLFDRNFNTSFYDPVGGGDVVLYQHLFWFFGH 244
Query: 412 PEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDID 591
PEVYILILPGFG++SHII+ KK F FIV AHH++T GID
Sbjct: 245 PEVYILILPGFGLVSHIIA-TFSKKRVFGHVPMIAAMLMIGLIGFIVWAHHMYTSGIDTS 303
Query: 592 TRAYFTSATIIIAVPTGIKIFR*LATIHGTQI-NYNPNIL*RLGFVFLFTVGGLTGVI 762
T+AYFT+AT++IA+PTGIK+F +AT+ G I Y P GFV LFT+GG+TG+I
Sbjct: 304 TKAYFTAATMVIAIPTGIKVFNWIATMWGGSIWMYTPMYF-AAGFVVLFTIGGITGII 360
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 234 bits (573), Expect = 2e-60
Identities = 121/240 (50%), Positives = 154/240 (64%)
Frame = +1
Query: 49 NGAGTG*TVYPPLSSNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFD 228
NGAGTG TVY PLS++ G +VD+AI SLH+AG SS +
Sbjct: 164 NGAGTGWTVYAPLSTS-GSAGPAVDMAILSLHIAGASSILGAINFITTILNMRAPGMTLH 222
Query: 229 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 408
++PLFV +V +TAF A AIT+LLTDRN T+F+D AGGGDP LYQHLF FFG
Sbjct: 223 KMPLFVWSVLVTAFLLLLALPVLAAAITMLLTDRNFGTTFYDAAGGGDPELYQHLFWFFG 282
Query: 409 HPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDI 588
HPEVYI+ILPGFGIIS I+S +K F F+V AHH+FT G+ +
Sbjct: 283 HPEVYIMILPGFGIISQIVS-TFSRKPVFGYLGMAYAMVAIGVVGFVVWAHHMFTTGMSV 341
Query: 589 DTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVIXA 768
+ + YFT+AT++IAVPTGIKIF +ATI G I++ ++ LGF+FLFTVGG+TGV+ A
Sbjct: 342 NVKMYFTAATMVIAVPTGIKIFSWIATIWGGSISFKTPMVWALGFIFLFTVGGVTGVVLA 401
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 229 bits (559), Expect = 8e-59
Identities = 113/242 (46%), Positives = 153/242 (63%)
Frame = +1
Query: 43 VXNGAGTG*TVYPPLSSNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 222
+ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 136 IDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMD 195
Query: 223 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 402
+ +LPLFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+F F
Sbjct: 196 YSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWF 255
Query: 403 FGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGI 582
FGHPEVYILI+P FG++S I+ Q KK F F V +HH+FTVG+
Sbjct: 256 FGHPEVYILIVPVFGVVSQIV-QVYAKKPIFGKIGMIYAMASIGFLGFCVWSHHMFTVGL 314
Query: 583 DIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVI 762
D D+RAYF+ A++IIA+PTG KIF LATI+G + + +L +GF+ LFT+GG+TGV+
Sbjct: 315 DADSRAYFSGASLIIAIPTGSKIFSWLATIYGGTLRWTTPLLYAVGFIVLFTIGGVTGVV 374
Query: 763 XA 768
A
Sbjct: 375 IA 376
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 222 bits (543), Expect = 7e-57
Identities = 121/242 (50%), Positives = 137/242 (56%)
Frame = +1
Query: 43 VXNGAGTG*TVYPPLSSNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 222
V GAGTG TVYPPL+ N+AH G SVDLAIFSLHLAGISS S
Sbjct: 119 VEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGISSILGAINFITTAINMKPPAIS 178
Query: 223 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 402
Q PLFV +V ITA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF F
Sbjct: 179 QYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWF 238
Query: 403 FGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGI 582
FGHPEVYILILPGFG+ISH+++ GKKE F FIV A
Sbjct: 239 FGHPEVYILILPGFGMISHVVTYYAGKKEPFGYMGMVWAMLSIGFLGFIVWAXXXXXXXX 298
Query: 583 DIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVI 762
LAT+HG I ++P +L LGF+FLFTVGGLTG++
Sbjct: 299 XXXXXXXXXXXXXXXXXXXXXXXXXWLATLHGGTIKWDPPMLWALGFIFLFTVGGLTGIV 358
Query: 763 XA 768
A
Sbjct: 359 LA 360
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 222 bits (543), Expect = 7e-57
Identities = 116/220 (52%), Positives = 137/220 (62%)
Frame = +1
Query: 43 VXNGAGTG*TVYPPLSSNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 222
V +GAGTG TVYPPLSS AH G SVDLAIF+LHL ISS +
Sbjct: 119 VESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMT 178
Query: 223 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 402
+LPLFV ++ ITAF + IT+LL DRN NTSFF+ +GGGDPILY+HLF F
Sbjct: 179 MHKLPLFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWF 238
Query: 403 FGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGI 582
FGHPEVYILI+PGFGIISH++S KK F F+V +HH++ VG+
Sbjct: 239 FGHPEVYILIIPGFGIISHVVS-TYSKKPVFGEISMVYAMASIGLLGFLVWSHHMYIVGL 297
Query: 583 DIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPN 702
D DTRAYFTSAT+IIA+PTGIKIF L N N N
Sbjct: 298 DADTRAYFTSATMIIAIPTGIKIFSWLMNPFSKDKNKNKN 337
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 220 bits (538), Expect = 3e-56
Identities = 110/240 (45%), Positives = 149/240 (62%)
Frame = +1
Query: 43 VXNGAGTG*TVYPPLSSNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 222
+ GAG G T YPP+S+ +VD AIF++H++G SS +
Sbjct: 224 IDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHVSGASSILGSINFITTFLNMRAPGMT 283
Query: 223 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 402
++PLF +V +TA+ AGAIT+LLTDRN T+FFDPAGGGDPIL+QH+F F
Sbjct: 284 LHKVPLFAWSVFVTAWLLLLSLPVLAGAITMLLTDRNFGTTFFDPAGGGDPILFQHIFWF 343
Query: 403 FGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGI 582
FGHPEVYI+ILP FG+ISHI++ KK F F+V AHH++TVG+
Sbjct: 344 FGHPEVYIVILPAFGVISHIVA-TFSKKPIFGYLPMVYALVAIGGLGFVVWAHHMYTVGM 402
Query: 583 DIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVI 762
+ +AYF AT++IAVPTGIKIF +AT+ I++ ++ LGF+FLFT+GG TG+I
Sbjct: 403 TLTQQAYFMVATMVIAVPTGIKIFSWIATMWMGSISFKTPMMFALGFIFLFTLGGTTGII 462
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 212 bits (518), Expect = 7e-54
Identities = 111/243 (45%), Positives = 145/243 (59%), Gaps = 4/243 (1%)
Frame = +1
Query: 52 GAGTG*TVYPPLSSNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQ 231
G G G T+YPPLS++ G +DLA+FSLH+AG+SS F
Sbjct: 123 GLGCGWTMYPPLSNSEFMDGLPIDLAVFSLHMAGMSSIAGSINFLVTIFNMRMGALFFMS 182
Query: 232 L-PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 408
L P+ + + T+ A +T+LL DR+ +TSF+ P GGGDPIL+QHLF FFG
Sbjct: 183 LNPMLIWTLFGTSILLVTSVPVLAAGLTLLLLDRHFSTSFYYPEGGGDPILWQHLFWFFG 242
Query: 409 HPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDI 588
HPEVYILILP FG+ISHI+ + K F F+V HH+F G+DI
Sbjct: 243 HPEVYILILPAFGVISHILCRSSAKLHVFGKIGMSWASMGIAWMGFLVWGHHMFVAGLDI 302
Query: 589 DTRAYFTSATIIIAVPTGIKIFR*LATIHG---TQINYNPNIL*RLGFVFLFTVGGLTGV 759
DTRAYFT+AT++IAVPTG+K+F LATI G + + +P+ +G V LFT+GGLTGV
Sbjct: 303 DTRAYFTAATLMIAVPTGVKVFNWLATIFGGVYSLKHSHPSTFWAIGVVLLFTIGGLTGV 362
Query: 760 IXA 768
I A
Sbjct: 363 ILA 365
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 190 bits (463), Expect = 3e-47
Identities = 87/146 (59%), Positives = 109/146 (74%)
Frame = +1
Query: 331 NLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXX 510
N T+FFDPAGGGD IL+QHLF FFGHPEVYILILPGFG+ISH+I+ GK+E F
Sbjct: 191 NYYTTFFDPAGGGDXILFQHLFXFFGHPEVYILILPGFGMISHVIAHYSGKREPFGYLGM 250
Query: 511 XXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN 690
F+V AHH+FTVG+D+DTRAYFT+AT+IIAVPTGIK+F +AT+ G+ +
Sbjct: 251 VYAMIAIGVLGFLVWAHHMFTVGMDVDTRAYFTAATMIIAVPTGIKVFSWMATLQGSNLQ 310
Query: 691 YNPNIL*RLGFVFLFTVGGLTGVIXA 768
+ + LGFVFLFT+GGLTG++ A
Sbjct: 311 WETPLFWALGFVFLFTLGGLTGIVLA 336
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 185 bits (451), Expect = 9e-46
Identities = 97/240 (40%), Positives = 126/240 (52%)
Frame = +1
Query: 43 VXNGAGTG*TVYPPLSSNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 222
+ G G+ T YPPLS S+D I LH GI S +
Sbjct: 129 IGGGPGSSWTFYPPLSVE-GQPELSLDTMILGLHTVGIGSLLGAINFMVTTQNMRSTAVT 187
Query: 223 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 402
DQ+ +FV +T+F AG++ LL DRN NTSF+D GG+P+LYQHLF F
Sbjct: 188 LDQISMFVWTSYLTSFLLVLSVPVLAGSLLFLLLDRNFNTSFYDTKKGGNPLLYQHLFWF 247
Query: 403 FGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGI 582
FGHPEVY++ILP FGIIS + K F V HH++T G+
Sbjct: 248 FGHPEVYVIILPVFGIISEAVLFLTDKDRLFGQTSMTFASIWIAVLGTSVWGHHMYTAGL 307
Query: 583 DIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVI 762
DIDTR YF++AT+IIA+P+ +KIF L T G+ P F+FLFTVGGL+G+I
Sbjct: 308 DIDTRTYFSAATMIIAIPSAVKIFNWLGTFFGSNQKMQPLWCWTYSFIFLFTVGGLSGII 367
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 182 bits (443), Expect = 9e-45
Identities = 92/130 (70%), Positives = 95/130 (73%)
Frame = +1
Query: 43 VXNGAGTG*TVYPPLSSNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 222
V NGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAGISS S
Sbjct: 91 VENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSILGAINFITTIINMRINKMS 150
Query: 223 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 402
FDQ+PLF+ AVGITA AGAIT+LLTDRNLNTSFFDPAGGGDPILYQHLF F
Sbjct: 151 FDQMPLFIWAVGITALLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWF 210
Query: 403 FGHPEVYILI 432
FGHPEVYILI
Sbjct: 211 FGHPEVYILI 220
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 179 bits (436), Expect = 6e-44
Identities = 102/237 (43%), Positives = 129/237 (54%), Gaps = 1/237 (0%)
Frame = +1
Query: 52 GAGTG*TVYPPLSSNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQ 231
G G G T+YPPLS G VD +FSLHLAG+SS S
Sbjct: 217 GCGIGWTLYPPLSI-WEGSGFGVDYLMFSLHLAGVSSLIGSVNFISTIFSRLSFNCS--- 272
Query: 232 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 411
+ V A T+ A IT+LL DRN T+FF+P+GGGDPIL+QHLF FFGH
Sbjct: 273 --IIVWAYLFTSVLLLLSLPVLASGITMLLFDRNFGTAFFEPSGGGDPILFQHLFWFFGH 330
Query: 412 PEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDID 591
PEVY+LILPGFGI+SHI +F +V HH+F VG D
Sbjct: 331 PEVYVLILPGFGIVSHICMSLSNNDSSFGYYGLICAMASIVCLGSVVWGHHMFMVGFDSL 390
Query: 592 TRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN-YNPNIL*RLGFVFLFTVGGLTGV 759
T +F+S T+II VPTGIK+F L ++ + +P + +GF+FLFTVGG+TGV
Sbjct: 391 TGVFFSSITMIIGVPTGIKVFSWLYMLNSCGMRVLDPIVWWLVGFIFLFTVGGVTGV 447
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 174 bits (424), Expect = 2e-42
Identities = 88/126 (69%), Positives = 92/126 (73%)
Frame = +1
Query: 43 VXNGAGTG*TVYPPLSSNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 222
V NGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAGISS S
Sbjct: 115 VENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSILGAINFITTIINMRMNNLS 174
Query: 223 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 402
FDQ+PLFV AVGITAF AGAIT+LLTDRNLNTSFFDPAGGGDPILYQHLF F
Sbjct: 175 FDQMPLFVWAVGITAFLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWF 234
Query: 403 FGHPEV 420
FGHP++
Sbjct: 235 FGHPKL 240
Score = 43.6 bits (98), Expect = 0.006
Identities = 36/104 (34%), Positives = 39/104 (37%)
Frame = +2
Query: 437 QDLV*FLILFHXXXXXXXXXXXXXXFMLY*QLGY*DSLFEXXXXXXXXXXXXXXXXXXXX 616
QDLV F +LF FM L Y D LFE
Sbjct: 246 QDLVSFHMLFPKKVEKSKLLVVSVSFMQSWLLVYSDLLFELIMYLPSESMLKLELVLHQQ 305
Query: 617 XXXXXXXXXXKFLDD*LQYMELKLIITLIFYED*VLYFYSQ*ED 748
KFL D +MELKLI+ L FYED L FY Q ED
Sbjct: 306 LSLLLSQLGLKFLVDWQPFMELKLIMVLQFYEDWDLCFYLQSED 349
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 171 bits (417), Expect = 1e-41
Identities = 94/239 (39%), Positives = 131/239 (54%), Gaps = 2/239 (0%)
Frame = +1
Query: 52 GAGTG*TVYPPLSSNIAHRG-XSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFD 228
G GTG T+YPPLS+++ +VD+ IF L ++G++S +
Sbjct: 126 GGGTGWTLYPPLSTSLMSLSPVAVDVIIFGLLVSGVASIMSSLNFITTVMHLRAKGLTLG 185
Query: 229 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 408
L + ++ IT+ G + +LL+D + NT FFDP GDPILYQHLF FFG
Sbjct: 186 ILSVSTWSLIITSGMLLLTLPVLTGGVLMLLSDLHFNTLFFDPTFAGDPILYQHLFWFFG 245
Query: 409 HPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDI 588
HPEVYILILP FG+ISH+IS + F +V HH++T G+++
Sbjct: 246 HPEVYILILPAFGVISHVISTNY-CRNLFGNQSMILAMGCIAVLGSLVWVHHMYTTGLEV 304
Query: 589 DTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN-YNPNIL*RLGFVFLFTVGGLTGVI 762
DTRAYFTS TI+I++PTG K+F + T + + + L L F+ FT GG TGVI
Sbjct: 305 DTRAYFTSTTILISIPTGTKVFNWICTYMSSNFGMIHSSSLLSLLFICTFTFGGTTGVI 363
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 166 bits (403), Expect = 6e-40
Identities = 89/236 (37%), Positives = 126/236 (53%)
Frame = +1
Query: 52 GAGTG*TVYPPLSSNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQ 231
G G G T+YP L H + D +F++HL GISS SF
Sbjct: 124 GMGVGWTLYPTLICIDFHSSLACDFVMFAVHLLGISSILNSINLLGTLFCCRRKFFSFLS 183
Query: 232 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 411
LF+ A ITA AG +T++L DRN NTSF+D GGGD IL+QH+F FFGH
Sbjct: 184 WSLFIWAALITAILLIITLPVLAGGVTLILCDRNFNTSFYDVVGGGDLILFQHIFWFFGH 243
Query: 412 PEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDID 591
PEVYI++LP FG+IS I+ + G + F V AHH+F VG+D+D
Sbjct: 244 PEVYIILLPVFGLISTIV-EVIGFRCVFSTVAMIYSMILIAILGMFVWAHHMFVVGMDVD 302
Query: 592 TRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGV 759
+RAYF +I+I +PT +K+F + + T + + + F+F+F +G +TG+
Sbjct: 303 SRAYFGGVSILIGLPTCVKLFNWIYSFLYTDMIITFEVYFVIMFIFMFLIGAVTGL 358
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 165 bits (400), Expect = 1e-39
Identities = 83/185 (44%), Positives = 109/185 (58%)
Frame = +1
Query: 43 VXNGAGTG*TVYPPLSSNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 222
+ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 136 IDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMD 195
Query: 223 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 402
+ +LPLFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+F F
Sbjct: 196 YSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWF 255
Query: 403 FGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGI 582
FGHPEVYILI+P FG++S I+ Q KK F F V +HH+FTVG+
Sbjct: 256 FGHPEVYILIVPVFGVVSQIV-QVYAKKPIFGKIGMIYAMASIGFLGFCVWSHHMFTVGL 314
Query: 583 DIDTR 597
D D R
Sbjct: 315 DADKR 319
>UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2;
Bruchidius|Rep: Cytochrome c oxidase subunit I -
Bruchidius aff. varius GLK-2003
Length = 339
Score = 164 bits (399), Expect = 2e-39
Identities = 81/118 (68%), Positives = 90/118 (76%)
Frame = +1
Query: 415 EVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDT 594
EVYILILPGFG+ISHIISQE GKKE F F+V AHH+FTVG+D+DT
Sbjct: 155 EVYILILPGFGMISHIISQESGKKEAFGTLGMIYAMMAIGLLGFVVWAHHMFTVGMDVDT 214
Query: 595 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVIXA 768
RAYFTSAT+IIAVPTGIK+F LAT HGTQI Y+P L LGFVFLFTVGGLTGV+ A
Sbjct: 215 RAYFTSATMIIAVPTGIKVFSWLATFHGTQILYSPVTLWTLGFVFLFTVGGLTGVVLA 272
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 162 bits (393), Expect = 1e-38
Identities = 94/237 (39%), Positives = 130/237 (54%), Gaps = 1/237 (0%)
Frame = +1
Query: 55 AGTG*TVYPPLSSNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQL 234
A G T YPPLSS SV+ ++FSLHLAGI+S + L
Sbjct: 112 ASAGWTFYPPLSS----LSPSVEFSVFSLHLAGIASLISSCNFLVTMLATRTSL--WYSL 165
Query: 235 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 414
LF ++ + + A IT++LTD++L T F+D GGDP+LYQHLF FFGHP
Sbjct: 166 SLFCWSIVLVSLLLVLSLPVLAVGITLILTDKHLGTCFYDATMGGDPLLYQHLFWFFGHP 225
Query: 415 EVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDT 594
EVY++ILP FG+ S I Q +V AHH++T G+DIDT
Sbjct: 226 EVYVVILPVFGLFSSSI-QLSSLHRIPGELSLVLAMASIALIGSVVWAHHMYTAGLDIDT 284
Query: 595 RAYFTSATIIIAVPTGIKIFR*LAT-IHGTQINYNPNIL*RLGFVFLFTVGGLTGVI 762
R+YFT+AT+IIAVPTGIKIF L++ + ++ N ++ F+ F +GG +G+I
Sbjct: 285 RSYFTAATMIIAVPTGIKIFTWLSSLLTMKRMTLNSLTFLQVSFIVSFAIGGTSGII 341
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 162 bits (393), Expect = 1e-38
Identities = 76/123 (61%), Positives = 92/123 (74%)
Frame = +1
Query: 400 FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVG 579
FFGHPEVYILILPGFG+ISHI++ GKKE F FIV AHH+FTVG
Sbjct: 2 FFGHPEVYILILPGFGMISHIVAYYSGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVG 61
Query: 580 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGV 759
+D+DTRAYFTSAT+IIA+PTG+K+F LAT+HG I ++ +L LGF+FLFTVGGLTG+
Sbjct: 62 MDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGSIKWDTPMLWALGFIFLFTVGGLTGI 121
Query: 760 IXA 768
I A
Sbjct: 122 ILA 124
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 152 bits (368), Expect = 1e-35
Identities = 92/235 (39%), Positives = 117/235 (49%)
Frame = +1
Query: 64 G*TVYPPLSSNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 243
G T YPPLS G +L I SL L G SS +PLF
Sbjct: 138 GWTSYPPLSLLSGKWGE--ELWILSLLLVGTSSILGAINFVTTILKMRIKDMDLHSMPLF 195
Query: 244 V*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVY 423
A+ T+ A A+ +L D TSFF+P GGGDP++YQHLF F+ HP VY
Sbjct: 196 CWAMLATSSLILLSTPVLASALILLSFDLIAGTSFFNPVGGGDPVVYQHLFWFYSHPAVY 255
Query: 424 ILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAY 603
I+ILP FG+IS +I +K F IV AHH+FT G R +
Sbjct: 256 IMILPFFGVISEVI-PVHARKPIFGYRAIAYSSLAISFLGLIVWAHHMFTSGTPGWLRMF 314
Query: 604 FTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVIXA 768
F + T++IAVPTGIKIF T+ G +I N +L GF+ F +GGLTGV+ A
Sbjct: 315 FMATTMLIAVPTGIKIFSWCGTLWGGKIQLNSAMLFAFGFLSSFMIGGLTGVMVA 369
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 149 bits (360), Expect = 1e-34
Identities = 82/231 (35%), Positives = 117/231 (50%)
Frame = +1
Query: 76 YPPLSSNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 255
Y PLSS VD I L + GI S S ++PLFV +
Sbjct: 148 YVPLSSKAYSSLQGVDYWIIGLLIMGIGSVSGAINIFATIINLRAPGMSLQRVPLFVWMM 207
Query: 256 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 435
+ A A+ +LL DR L ++FFDP GG +L+QH F FGHPEVYILIL
Sbjct: 208 LMQAILIILALPALNSALAMLLIDRWLGSAFFDPTRGGSAVLWQHYFWIFGHPEVYILIL 267
Query: 436 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 615
PGFG+IS +I +K + + V AHH+F VG+ + +F
Sbjct: 268 PGFGMISEVI-PVFSRKPIYGYTFVAASSVAIVLLGYGVWAHHMFAVGLGMYADIFFAVG 326
Query: 616 TIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVIXA 768
+++IA+PTGIK+F AT+ G +I +N ++ + F+ F +GGLTG++ A
Sbjct: 327 SLLIAIPTGIKVFNWTATLWGGEIQFNTSLHFAVAFLLQFVIGGLTGIMFA 377
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 147 bits (357), Expect = 2e-34
Identities = 85/236 (36%), Positives = 128/236 (54%), Gaps = 2/236 (0%)
Frame = +1
Query: 61 TG*TVYPPLSSNIAHR-GXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLP 237
+G T+YPPLS+ A G ++DL++ +H+ GISS +F +
Sbjct: 135 SGWTLYPPLSTRDADNIGVNIDLSLLVVHVLGISSTIGSVNYITTNKYNRHVGLTFMNIN 194
Query: 238 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 417
++ ++ +T+ AIT LL DRN+N++ +D G DP+LYQHLF FFGHPE
Sbjct: 195 IYNFSIIVTSILLIGSLPILGVAITGLLLDRNINSTIYDVIG--DPVLYQHLFWFFGHPE 252
Query: 418 VYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTR 597
VY++ILP FG+ S I++ K+ F + V AHH+FTVG+DID+R
Sbjct: 253 VYVIILPVFGLTSLILTSII-HKDIFGREGMMYCIISIGVVGYFVWAHHMFTVGLDIDSR 311
Query: 598 AYFTSATIIIAVPTGIKIFR*LAT-IHGTQINYNPNIL*RLGFVFLFTVGGLTGVI 762
+YF+ AT II++PT +K+F + T G N + F+ F GG TG++
Sbjct: 312 SYFSIATSIISIPTSVKMFSYINTWASGRGFRGNNSSWSFFSFLICFCFGGFTGLL 367
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 147 bits (356), Expect = 3e-34
Identities = 86/242 (35%), Positives = 119/242 (49%)
Frame = +1
Query: 43 VXNGAGTG*TVYPPLSSNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 222
V G Y PL+ VD I + L G++S +
Sbjct: 136 VGGAPNVGWFAYAPLTQKQFAPTAGVDYWIVGIGLTGVASIAGALNFIVTILNMRAPGMT 195
Query: 223 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 402
+++PLFV + AF A LL DR+ T FF P GGD +L+QHLF F
Sbjct: 196 LNRMPLFVWMQLVVAFILIFAFPVLTVATIQLLFDRHFGTRFFLPNLGGDAVLWQHLFWF 255
Query: 403 FGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGI 582
FGHPEVYILILP GIIS ++ +K F F+V AHH+F VG+
Sbjct: 256 FGHPEVYILILPTMGIISEVL-PTFSRKPIFGYAFVAYSGVAIGFLGFLVWAHHMFAVGL 314
Query: 583 DIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVI 762
A+F +A+ +IAVPTG+KIF LAT+ +N ++L +GF+ +F +GG++GV
Sbjct: 315 GPLANAFFGAASFLIAVPTGVKIFNWLATMWQGSLNLTTSMLYAIGFISMFIIGGISGVT 374
Query: 763 XA 768
A
Sbjct: 375 LA 376
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 143 bits (347), Expect = 4e-33
Identities = 81/230 (35%), Positives = 116/230 (50%)
Frame = +1
Query: 70 TVYPPLSSNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 249
T YPP S N + L +F +HL G SS +F + LFV
Sbjct: 85 TGYPPFSLN--NDAGVTALYVFVMHLLGASSIATAVNFLVTYITMRAPGYTFFKTNLFVH 142
Query: 250 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 429
+ AGA+T+L D+ L T+FF+PA GGDP++YQ++F F+ HP VY+
Sbjct: 143 TLIAANVIQLVGVPSLAGAVTMLFLDKYLGTNFFNPAKGGDPLIYQNIFWFYSHPVVYVQ 202
Query: 430 ILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFT 609
+LP FG S II ++ F F + HH+F G+ TR F+
Sbjct: 203 VLPVFGFYSEII-PVFARRPLFGYTSMVFAVWAITAVSFFLWIHHMFVSGVPNWTRVLFS 261
Query: 610 SATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGV 759
T++IAVPTGIKIF + T++ I++ +L LG VF+F +GGLTG+
Sbjct: 262 YTTLLIAVPTGIKIFNWMLTLYRGAIHFRSQMLYALGGVFMFLIGGLTGL 311
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 143 bits (346), Expect = 5e-33
Identities = 81/242 (33%), Positives = 119/242 (49%)
Frame = +1
Query: 43 VXNGAGTG*TVYPPLSSNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 222
V N A TG YPPL+ VD I++L ++GI +
Sbjct: 163 VGNFARTGWVAYPPLAELGFSPDVGVDYYIWALQISGIGTTLTAINFLVTVIKMRAPGMK 222
Query: 223 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 402
+P+F GA+ +L DR L+ FF GG+ ++Y +LF
Sbjct: 223 LMDMPIFTWTCTWANVLIATSFPILTGALAMLALDRYLDFHFFTAELGGNAMMYLNLFWA 282
Query: 403 FGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGI 582
+GHPEVYIL+LP FGI S ++S GK+ F F+V HH FT+G
Sbjct: 283 WGHPEVYILVLPAFGIFSEVVSTFAGKR-LFGHKSMIYASGAISVLGFMVWLHHFFTMGS 341
Query: 583 DIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVI 762
+ A+F AT+II++PTG+K+F L TI+ ++ + IL LGF+ F++GG+TGV+
Sbjct: 342 GANVNAFFGIATMIISIPTGVKLFNWLFTIYKGRLRFETPILWTLGFMVTFSIGGMTGVL 401
Query: 763 XA 768
A
Sbjct: 402 LA 403
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 142 bits (345), Expect = 7e-33
Identities = 73/123 (59%), Positives = 81/123 (65%)
Frame = +1
Query: 43 VXNGAGTG*TVYPPLSSNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 222
V GAGTG TV PPLS+NIAH G SVDLAIFSLH+AG+ S +
Sbjct: 37 VEKGAGTGWTVSPPLSANIAHEGSSVDLAIFSLHMAGVXSILGAINFISTVLNMRPSGMT 96
Query: 223 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 402
++PLFV AV ITA AGAIT+LLTDRN+NTSFFDPAGGGDPILYQHLF F
Sbjct: 97 PXRMPLFVWAVEITAILLLLSLPVLAGAITMLLTDRNINTSFFDPAGGGDPILYQHLFWF 156
Query: 403 FGH 411
GH
Sbjct: 157 XGH 159
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 140 bits (338), Expect = 5e-32
Identities = 80/242 (33%), Positives = 116/242 (47%), Gaps = 5/242 (2%)
Frame = +1
Query: 49 NGAGTG*TVYPPLSSNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFD 228
+G G T+YPPLS+ + VDL + + +AG SS
Sbjct: 127 HGDSIGWTLYPPLST--ISKSIGVDLILLGIIIAGFSSTLTGINFILTITRLRRPDIKML 184
Query: 229 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF-----DPAGGGDPILYQHL 393
+ LF +V + A +LL +R+L FF DPA GDP L+QH+
Sbjct: 185 DMSLFAWSVLAASMLMVTALPPLAAGAIMLLLERHLGMHFFTPVPGDPAASGDPRLFQHI 244
Query: 394 F*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFT 573
F FFGHPEVYIL+LP G++S +I Q ++ + F V HH+FT
Sbjct: 245 FWFFGHPEVYILVLPAMGLVSEVI-QRMARRRAYGYTAIAISSVAIASISFAVWMHHMFT 303
Query: 574 VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLT 753
D R AT+ +A+P+G+K+F +AT++G +I +L L F+ F VGG+T
Sbjct: 304 AVQDFAPRVAMAIATMAVAIPSGVKVFNWVATLYGGRIQLKAPMLFMLTFLLFFIVGGVT 363
Query: 754 GV 759
GV
Sbjct: 364 GV 365
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 140 bits (338), Expect = 5e-32
Identities = 90/243 (37%), Positives = 122/243 (50%), Gaps = 5/243 (2%)
Frame = +1
Query: 55 AGTG*TVYPPLS-----SNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 219
A TG T+Y PLS N A+ G VDL + LHL+G+S+
Sbjct: 206 AQTGWTMYTPLSVGEGMGNQANAG--VDLMLLGLHLSGVSATMGSINFIATIFTERGKNV 263
Query: 220 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 399
S+ L +F + + AI +LL DRN TSFF AG G IL+QHLF
Sbjct: 264 SWANLDIFSWTILTQSGLILFAFPLLGSAIMMLLFDRNFGTSFF--AGEGGAILWQHLFW 321
Query: 400 FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVG 579
FFGHPEVYI++LP GIIS+I+ + G++ F F V AHH+F G
Sbjct: 322 FFGHPEVYIIVLPPMGIISYILPRFSGRR-LFGFKFVVYSTLAIGVLSFGVWAHHMFATG 380
Query: 580 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGV 759
+D RA F + ++ IAVP+ +K F + T+ I +L +GFV F +GG+TGV
Sbjct: 381 LDPRLRASFMAVSLAIAVPSAVKTFNWITTMWNGNIRLTTPMLFSVGFVANFILGGVTGV 440
Query: 760 IXA 768
A
Sbjct: 441 FLA 443
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 139 bits (337), Expect = 6e-32
Identities = 81/238 (34%), Positives = 121/238 (50%)
Frame = +1
Query: 55 AGTG*TVYPPLSSNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQL 234
A T T+Y PLS ++ +VD+ + LHL G+S+ + L
Sbjct: 179 AQTSWTMYTPLSLQMS--SPAVDMMMLGLHLTGVSATMGAINFIATIFTERGEDVGWPDL 236
Query: 235 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 414
+F + + A+ +LL DRN T+FF AGG DPI +QHLF FFGHP
Sbjct: 237 DIFSWTMLTQSGLILFAFPLFGSALIMLLLDRNFGTTFFTVAGG-DPIFWQHLFWFFGHP 295
Query: 415 EVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDT 594
EVY+L+LP GI+S I+ + G+K F F V AHH+FT GID
Sbjct: 296 EVYVLVLPPMGIVSLILPKFSGRK-LFGFKFVVYSTLAIGVLSFGVWAHHMFTTGIDPRI 354
Query: 595 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVIXA 768
R+ F + ++ I++P+ +K+F + T+ ++ +L +GFV F +GG+TGV A
Sbjct: 355 RSSFMAVSLAISIPSAVKVFNWITTMWNGKLRLTAPMLFCIGFVQNFIIGGVTGVFLA 412
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 138 bits (333), Expect = 2e-31
Identities = 82/238 (34%), Positives = 118/238 (49%), Gaps = 1/238 (0%)
Frame = +1
Query: 52 GAGTG*TVYPPLSSNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQ 231
G+GTG T+YPPLS+++++ G +D IF L AGI+S D+
Sbjct: 129 GSGTGWTLYPPLSTSLSNVG--IDFIIFGLLAAGIASTLSSVNFITTFTSVKTIGFVIDR 186
Query: 232 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 411
+ ++ +T+F ++ DR+ NT FF+ + GDP+LYQHLF FFGH
Sbjct: 187 ISPAAWSIVLTSFLLLLSLPVVTAVFLMVFLDRHYNTMFFESSNSGDPVLYQHLFWFFGH 246
Query: 412 PEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDID 591
PEVYI+ILPGFGIIS ++S KE F +
Sbjct: 247 PEVYIMILPGFGIISLLLSTYT-TKEMFGNQTMILAMGFNSFVRLFGLGTSYVHIRFGSR 305
Query: 592 TRAYFTSATIIIAVPTGIKIFR*LATIHGTQ-INYNPNIL*RLGFVFLFTVGGLTGVI 762
YFT+ TI+IA+PTG KIF + T+ + I +L + F+ F +GG TGV+
Sbjct: 306 YSRYFTTVTILIALPTGNKIFNWVTTLQCVESIKSLGLVLFTVLFIVNFVIGGTTGVV 363
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 137 bits (332), Expect = 2e-31
Identities = 77/235 (32%), Positives = 115/235 (48%)
Frame = +1
Query: 64 G*TVYPPLSSNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 243
G T Y LS + +G +D + L ++G+ + ++ +LPLF
Sbjct: 136 GWTSYASLS--LHSKGHGIDFFVLGLQISGLGTLIAGINFLATIINMRAPGMTYMRLPLF 193
Query: 244 V*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVY 423
+ + + +++ DR T+FF+P GG+ ++++HLF FGHPEVY
Sbjct: 194 TWTTFVASALILFAFPPLTVGLALMMLDRLFGTNFFNPELGGNTVIWEHLFWIFGHPEVY 253
Query: 424 ILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAY 603
ILILP FGI S +I +K F F+V HH+FT G+ A
Sbjct: 254 ILILPAFGIFSEVI-PVFARKRLFGYSSMVFAIVLIGFLGFMVWVHHMFTTGLGPIANAI 312
Query: 604 FTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVIXA 768
F AT+ IA+PTGIKIF L TI G + Y +L + F+ F +GG+TGV+ A
Sbjct: 313 FAVATMAIAIPTGIKIFNWLLTIWGGNVKYTTAMLYAVSFIPSFVLGGVTGVMLA 367
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 136 bits (330), Expect = 4e-31
Identities = 80/242 (33%), Positives = 120/242 (49%)
Frame = +1
Query: 43 VXNGAGTG*TVYPPLSSNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 222
V G G Y PLS G D+ + +S+ S
Sbjct: 134 VDTGPDIGWFAYVPLSGPQYAAGKRADIWAQMITFTEVSALAIAVEIVVTVFKQRAPGMS 193
Query: 223 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 402
D++PLFV ++ +T+F A T L+ DR + T FF+PA GGD +L+QHLF F
Sbjct: 194 LDRIPLFVWSMLVTSFLVILAMPAIMIASTSLILDRLVGTHFFNPAEGGDVLLWQHLFWF 253
Query: 403 FGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGI 582
FGHPEVYI+ LP G++S I++ ++ F F + HH+F G+
Sbjct: 254 FGHPEVYIIFLPAVGMVSSIVATFT-QRPVFGYLAMVMALIATGVLAFGLWVHHMFVAGL 312
Query: 583 DIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVI 762
++FT++++ IAVP G++IF LATI + + L +GF+ +F +GGLTGV+
Sbjct: 313 PRLGESFFTASSMAIAVPAGLQIFCWLATIWAGRPIFKTPFLFVIGFIVVFVIGGLTGVM 372
Query: 763 XA 768
A
Sbjct: 373 VA 374
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 136 bits (330), Expect = 4e-31
Identities = 76/238 (31%), Positives = 113/238 (47%)
Frame = +1
Query: 55 AGTG*TVYPPLSSNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQL 234
A TG YPPL+ G VD I++L L+G+ + +
Sbjct: 166 AKTGWVAYPPLAGIQYSPGVGVDYYIWALQLSGLGTTLTGVNFLVTVMKMRAPGMKLMDM 225
Query: 235 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 414
P+F A+ +L DR L+ F GG+P++Y +LF +GHP
Sbjct: 226 PIFTWTCTWANVLIVASFPILTAALALLTVDRYLDFHIFTNELGGNPMMYVNLFWAWGHP 285
Query: 415 EVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDT 594
EVYILILP FG+ S + S GK+ F F V HH FT+G
Sbjct: 286 EVYILILPAFGVFSEVTSTFAGKR-LFGHHSMIYASGAIAVLGFAVWLHHFFTMGAGASV 344
Query: 595 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVIXA 768
+F AT++I++PTG+K+F L TI+ ++ + I+ LGF+ F++GG+TGV+ A
Sbjct: 345 NTFFGLATMLISIPTGVKLFNWLFTIYQGRLRFTAPIMWTLGFMITFSIGGMTGVLLA 402
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 135 bits (326), Expect = 1e-30
Identities = 70/118 (59%), Positives = 76/118 (64%)
Frame = +1
Query: 43 VXNGAGTG*TVYPPLSSNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 222
V +GAGTG TVYPPLS N AH G SVDLAIFSLHLAG+SS
Sbjct: 101 VESGAGTGWTVYPPLSGNTAHAGPSVDLAIFSLHLAGVSSILGAVNFITTVINMRWGAMK 160
Query: 223 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 396
+ + LFV +V ITA AGAIT+LLTDRN NTSFFDPAGGGDPILYQHLF
Sbjct: 161 IELVSLFVWSVKITAILLLLSLPVLAGAITMLLTDRNFNTSFFDPAGGGDPILYQHLF 218
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 134 bits (325), Expect = 2e-30
Identities = 70/122 (57%), Positives = 79/122 (64%)
Frame = +1
Query: 43 VXNGAGTG*TVYPPLSSNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 222
V GAGTG TVYPPL+S AH G SVD+AIFSLHLAG+SS +
Sbjct: 119 VEQGAGTGWTVYPPLASIQAHSGGSVDMAIFSLHLAGLSSILGAMNFITTVMNMRTPGMT 178
Query: 223 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 402
++PLFV +V ITA AGAIT+LLTDR NT+FFDPAGGGDPILYQHLF F
Sbjct: 179 MSRIPLFVWSVLITAILLLLSLPVLAGAITMLLTDRYFNTTFFDPAGGGDPILYQHLFWF 238
Query: 403 FG 408
FG
Sbjct: 239 FG 240
Score = 93.9 bits (223), Expect = 4e-18
Identities = 45/75 (60%), Positives = 59/75 (78%), Gaps = 2/75 (2%)
Frame = +1
Query: 544 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN--YNPNIL*RL 717
FIV A H++ VG+D+DTRAYFT+AT+IIAVPTGIKIF LAT+ G+ N + + L
Sbjct: 250 FIVWADHMYVVGMDVDTRAYFTAATMIIAVPTGIKIFSWLATVSGSGRNLIFTTPMAWAL 309
Query: 718 GFVFLFTVGGLTGVI 762
GF+FLFT+GGLTG++
Sbjct: 310 GFIFLFTIGGLTGIV 324
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 132 bits (320), Expect = 7e-30
Identities = 79/231 (34%), Positives = 111/231 (48%)
Frame = +1
Query: 76 YPPLSSNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 255
Y L+S G D L L GI + + ++P+FV
Sbjct: 149 YANLTSVQFTSGLGPDFWTLGLLLLGIGTLVSGFNFIVTILNMRAPGMTLMKMPVFVWTT 208
Query: 256 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 435
+T+ A+ +L+ DR +FF+ GG + YQHLF FGHPEVYILIL
Sbjct: 209 LVTSAIIIFAFPSVTVALIMLMFDRTFAANFFEVLRGGSVVFYQHLFWTFGHPEVYILIL 268
Query: 436 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 615
P GIIS +I +K F F V +HH+FTVG+ + F+
Sbjct: 269 PAMGIISEVIPVH-ARKMLFGYSVMVFSTALIGFMGFTVWSHHMFTVGMGPVVNSIFSLT 327
Query: 616 TIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVIXA 768
T+ IAVPTG+KIF L+T+ G QI + +L +GF+ FT+GGL+G + A
Sbjct: 328 TMAIAVPTGVKIFNWLSTMWGGQIRFTAAMLFAIGFIASFTIGGLSGFMHA 378
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 132 bits (318), Expect = 1e-29
Identities = 68/118 (57%), Positives = 76/118 (64%)
Frame = +1
Query: 43 VXNGAGTG*TVYPPLSSNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 222
V GAGTG TVYPPLS +H G SVDLAIFSLHL+GISS +
Sbjct: 118 VEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMT 177
Query: 223 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 396
+LPLFV A+ +TA AGAIT+LLTDRN NTSF+DPAGGGDPILYQHLF
Sbjct: 178 LHKLPLFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLF 235
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 131 bits (317), Expect = 2e-29
Identities = 76/242 (31%), Positives = 114/242 (47%)
Frame = +1
Query: 43 VXNGAGTG*TVYPPLSSNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 222
+ G T Y PL+SN G + + L +AGI + +
Sbjct: 158 IGGSPNAGWTSYMPLASNDMSPGPGENYYLLGLQIAGIGTLMTGINFMVTILKMRTKGMT 217
Query: 223 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 402
++P+F IT A+ +L DR FF GG P+L+ +LF
Sbjct: 218 LMRMPMFTWTTLITMVIIVFAFPVLTVALALLSFDRLFGAHFFTLEAGGMPMLWANLFWI 277
Query: 403 FGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGI 582
+GHPEVYI+ILP FGI S IIS +K+ F F+V HH FT+G
Sbjct: 278 WGHPEVYIVILPAFGIFSEIISSF-ARKQLFGYKAMVGSIIAISVLSFLVWTHHFFTMGN 336
Query: 583 DIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVI 762
++F+ T+ I++PTG+KIF L T++ +I++ +L L F+ F +GG+TGV+
Sbjct: 337 SASVNSFFSITTMAISIPTGVKIFNWLFTMYKGRISFTTPMLWALAFIPNFVIGGVTGVM 396
Query: 763 XA 768
A
Sbjct: 397 LA 398
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 130 bits (315), Expect = 3e-29
Identities = 73/151 (48%), Positives = 86/151 (56%), Gaps = 4/151 (2%)
Frame = +1
Query: 43 VXNGAGTG*TV----YPPLSSNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXX 210
+ G GTG T+ YPPLS +H G SVDLAIF+LHL+G+SS
Sbjct: 147 IEGGVGTGWTLLKDKYPPLSGLQSHSGPSVDLAIFALHLSGVSSLLGSINFITTVANMRT 206
Query: 211 XXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 390
+L LF + IT++LTDRN NTSFF+ AGGGDPIL+QH
Sbjct: 207 PGIKLHKLALF-------GWATWSSRSRYFLGITMVLTDRNFNTSFFEVAGGGDPILFQH 259
Query: 391 LF*FFGHPEVYILILPGFGIISHIISQERGK 483
LF FFGHPEVYILI+PGFGIIS IS K
Sbjct: 260 LFWFFGHPEVYILIIPGFGIISTTISSSSNK 290
Score = 96.3 bits (229), Expect = 7e-19
Identities = 44/64 (68%), Positives = 53/64 (82%)
Frame = +1
Query: 559 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 738
HH++TVG+D+DTRAYFT+AT+IIAVPTGIKIF LAT +G I P +L LGFVFLFT
Sbjct: 349 HHMYTVGLDVDTRAYFTAATLIIAVPTGIKIFSWLATCYGGSIKMTPVMLFSLGFVFLFT 408
Query: 739 VGGL 750
+GGL
Sbjct: 409 IGGL 412
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 128 bits (309), Expect = 1e-28
Identities = 56/81 (69%), Positives = 62/81 (76%)
Frame = +3
Query: 330 KLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRN 509
K KYIIF S W F+STFILIFWT SLYFNFT IWYNFSYYF K KK N W+F +
Sbjct: 7 KFKYIIFWSSWSSWSYFMSTFILIFWTPSSLYFNFTSIWYNFSYYFPSKSKKGNLWVFSD 66
Query: 510 NLCYTSNWVIRIHCLSSSYIH 572
NLCY SNW+I I+CLSSSYI+
Sbjct: 67 NLCYISNWIISIYCLSSSYIY 87
Score = 95.1 bits (226), Expect = 2e-18
Identities = 46/54 (85%), Positives = 49/54 (90%)
Frame = +1
Query: 601 YFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVI 762
YFTSAT+IIAVPTGIKIF LAT HGTQINY+P+IL LGFVFLFTVGGLTGVI
Sbjct: 97 YFTSATMIIAVPTGIKIFSWLATFHGTQINYSPSILWSLGFVFLFTVGGLTGVI 150
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 128 bits (308), Expect = 2e-28
Identities = 78/240 (32%), Positives = 110/240 (45%), Gaps = 2/240 (0%)
Frame = +1
Query: 55 AGTG*TVYPPLS--SNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFD 228
A +G YPP+S + + H L I ++ L+GISS F
Sbjct: 146 ASSGWWSYPPMSLQNPLGHFINGEFLWILAVALSGISSIMGAINFVTTIIRMRAPGMGFF 205
Query: 229 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 408
++P+FV G +LL D + TSFF P GGGDP+L+QH F F+
Sbjct: 206 RMPVFVWTAWAAQTIQLIGLPALTGGAVMLLFDLSFGTSFFRPEGGGDPVLFQHFFWFYS 265
Query: 409 HPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDI 588
HP VY+L+LP FGI S + +K F IV AHH+F G
Sbjct: 266 HPAVYVLVLPVFGIFSELF-PVYARKPLFGYRFVAIASFGITFLSLIVWAHHMFYTGTPN 324
Query: 589 DTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVIXA 768
R F T++IA+PTG+K+F L T+ + N +L +G + F G+TGV+ A
Sbjct: 325 WMRHIFMFTTMLIAIPTGVKVFAWLGTLWAGNLRLNTPMLFCIGGLINFIFAGITGVMLA 384
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 128 bits (308), Expect = 2e-28
Identities = 81/254 (31%), Positives = 122/254 (48%), Gaps = 14/254 (5%)
Frame = +1
Query: 49 NGAGTG*TVYPPLS---SNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 219
+GA G T YPPLS ++ G + L + + G+SS
Sbjct: 155 HGAAAGWTSYPPLSDMTTSAPSSGAAQTLWLLGVTTVGVSSMLGSVNYMTTIIQMRAPGM 214
Query: 220 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP-----------AGG 366
+ +LPL + A+ ITA A ++L DR + T FF P AGG
Sbjct: 215 TMFRLPLTIWAMFITALLQAFALPVLTAAGFMMLADRLIGTGFFLPEGLVVNNSPMAAGG 274
Query: 367 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXF 546
G P+L+QHLF F+ HP VYI+ILP G++S I++ +K F F
Sbjct: 275 GQPLLWQHLFWFYSHPAVYIMILPAMGMVSDILACF-SRKPIFGYKPMVYSICGIAGLGF 333
Query: 547 IV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFV 726
IV HH+F G++ F AT++IA+P+ +K F L T++G ++ + +L L FV
Sbjct: 334 IVWGHHMFVSGMNPGLGMTFMVATMMIALPSAVKTFNWLGTVYGGKVQFTTPMLFALSFV 393
Query: 727 FLFTVGGLTGVIXA 768
+F +GGL+G+ A
Sbjct: 394 SMFVIGGLSGIFMA 407
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 127 bits (306), Expect = 3e-28
Identities = 75/240 (31%), Positives = 114/240 (47%), Gaps = 5/240 (2%)
Frame = +1
Query: 55 AGTG*TVYPPLSSNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQL 234
AG G T Y PLS+N+ G L + ++ + G+SS ++ +L
Sbjct: 155 AGAGWTTYTPLSTNVGMPGMGQTLVVAAIFVTGVSSTMGAVNYITTVIRLRAPGMTYMRL 214
Query: 235 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPA-----GGGDPILYQHLF* 399
PL + + +TA A +LL DR+ T FF GGGDPIL+QHLF
Sbjct: 215 PLTIWGLWLTAILNALFVPVLGSAALLLLLDRSFGTEFFVAGASAVRGGGDPILWQHLFW 274
Query: 400 FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVG 579
FGHPEVYI+ILP +GI+ ++S K + + HH+F G
Sbjct: 275 IFGHPEVYIMILPAWGILGDVLSFFARKPHHWYRGTVWAMVLVTVLSAMVY-GHHMFMTG 333
Query: 580 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGV 759
+ F T++I++P+ + + + T+ + Y+ +L LG VF+F VGGLTG+
Sbjct: 334 MSPLLGEGFMLFTLLISIPSMVVVVNWVLTLWQGSLRYDTPMLFALGTVFVFGVGGLTGL 393
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 127 bits (306), Expect = 3e-28
Identities = 67/131 (51%), Positives = 80/131 (61%)
Frame = +1
Query: 43 VXNGAGTG*TVYPPLSSNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 222
V +GAGTG TVYPPLSS AH G SVDLAIF+LHL ISS +
Sbjct: 119 VESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMT 178
Query: 223 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 402
+LPLFV ++ ITAF + IT+LL DRN NTSFF+ +GGGDPILY+HLF F
Sbjct: 179 MHKLPLFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWF 238
Query: 403 FGHPEVYILIL 435
FG I++L
Sbjct: 239 FGQTVATIIML 249
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 126 bits (304), Expect = 6e-28
Identities = 74/232 (31%), Positives = 116/232 (50%)
Frame = +1
Query: 73 VYPPLSSNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 252
+Y PLS++ G S D + + LA I+S S ++P+ +
Sbjct: 170 MYVPLSTSAYTEGLSADFWLIGITLAEIASVTAAVEIIAAILCSRAPGMSLTKMPILMWY 229
Query: 253 VGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 432
+ TAF +L +R L FFD GGDP+L+QHLF FGHPEVYI+
Sbjct: 230 LLATAFMIAIAFPPLIIGSILLEAERLLGLPFFDHTLGGDPLLWQHLFWLFGHPEVYIIF 289
Query: 433 LPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTS 612
LP G+++ ++ G K F F + AHH+F G+ I + + F++
Sbjct: 290 LPAAGMVATMLPTFVG-KPLFGYGFAVAAVVTMSFLSFGLWAHHMFATGLPILSLSLFSA 348
Query: 613 ATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVIXA 768
A+ ++AVPTG++IF +AT+ + + LGF+F+F +GG+TGV+ A
Sbjct: 349 ASTMVAVPTGVQIFCFIATLSQGKPRLTVPMHFILGFLFIFVLGGMTGVMVA 400
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 125 bits (302), Expect = 1e-27
Identities = 68/128 (53%), Positives = 81/128 (63%)
Frame = -3
Query: 395 NKC*YKIGSPPPAGSKNDVFKFRSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKGN*SNDI 216
NKC + IGSPPPAGSK +VFKFRSV +IVIAPA TGS++N+K AV T TN G S I
Sbjct: 1 NKC-WSIGSPPPAGSKKEVFKFRSVKSIVIAPASTGSESNSKMAVSNTDQTNSGMRSMVI 59
Query: 215 LFNRXXXXXXXXXXXXXIDEIPAKCSEKIARSTXLPLCAILDESGG*TVHPVPAPFXTML 36
+R I+E PAKC+EKI ST P CAI SGG TVHPVP P T+
Sbjct: 60 PADRMLITVVMKFTAPKIEETPAKCNEKIPMSTDAPACAIPLASGGYTVHPVPTPLSTIP 119
Query: 35 LEINNIRE 12
L + ++E
Sbjct: 120 LNKSKVKE 127
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 123 bits (297), Expect = 4e-27
Identities = 81/243 (33%), Positives = 118/243 (48%), Gaps = 13/243 (5%)
Frame = +1
Query: 73 VYPPLSS---NIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 243
+YPPLS+ ++ G + + + S+ L IS SF +LPL
Sbjct: 177 IYPPLSALPQAMSGSGAGMTMWLISMALFIISVLLGGINYITTVINLRVKGMSFTRLPLT 236
Query: 244 V*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP----AG------GGDPILYQHL 393
+ A ITA A +L+ DR+L TSFF AG GG P+L+QHL
Sbjct: 237 IWAFFITAIIGLLSFPVLFSAALLLIFDRSLGTSFFLSEIYIAGEALHHQGGSPVLFQHL 296
Query: 394 F*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFT 573
F F GHPEVYI+++P GI S +I+ +K F FIV AHH+F
Sbjct: 297 FWFLGHPEVYIVLIPALGITSEVIATN-ARKPIFGYKAMIGSILGIAVLSFIVWAHHMFV 355
Query: 574 VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLT 753
G++ + F T+IIAVP+ +K F + T+ I + P ++ +G V +F GG+T
Sbjct: 356 TGMNPFLGSVFMFLTLIIAVPSAVKSFNYITTLWRGNIIFTPAMMFSIGLVSMFISGGVT 415
Query: 754 GVI 762
G+I
Sbjct: 416 GII 418
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 122 bits (295), Expect = 7e-27
Identities = 73/235 (31%), Positives = 116/235 (49%), Gaps = 3/235 (1%)
Frame = +1
Query: 73 VYPPLSSNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 252
+YPPL+ G + D + + IS+ S ++P+F A
Sbjct: 154 MYPPLTLKEYSPGDNADFWLLGIGFIEISAIAGAIEIIVGTLRTRPPGMSLTRMPIFAWA 213
Query: 253 VGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 432
+ I A A +L +R+ FF GGDP+L+QHLF FFGHPEVYI+
Sbjct: 214 MLIFAAMIMIAFPAVILATMLLEIERSFGWPFFTAERGGDPLLWQHLFWFFGHPEVYIIF 273
Query: 433 LPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTS 612
LP G++S I+ + F + HH+FT GI + +F++
Sbjct: 274 LPAAGLVSMIV-PTMARHPLVGYRLIVVALIGTGFFSFGLWVHHMFTTGIPSLSLGFFSA 332
Query: 613 ATIIIAVPTGIKIFR*LATIHGTQINY---NPNIL*RLGFVFLFTVGGLTGVIXA 768
A++ +A+P+GI++F +ATI ++ + P++ LGF+F+FTVGG+TGV+ A
Sbjct: 333 ASMAVAIPSGIQVFSWIATIASSKERFRITTPSLF-VLGFLFIFTVGGVTGVMVA 386
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 122 bits (295), Expect = 7e-27
Identities = 74/231 (32%), Positives = 107/231 (46%)
Frame = +1
Query: 76 YPPLSSNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 255
YPP + + + G VD I+SL LA + S +PLF
Sbjct: 193 YPPYTETLYNPGIGVDYWIWSLTLASLGSTLTGINIAVTIYKKRAPGMKLYYMPLFTWTA 252
Query: 256 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 435
TA L DR L+ FF GG+ + + ++F FGHPEVYILIL
Sbjct: 253 LCTAIMMIFAMPPLTVVTLQLALDRYLDFHFFTNGLGGNQMNFLNMFWLFGHPEVYILIL 312
Query: 436 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 615
P FG+ S I S GK F F+V HH FT+G A F A
Sbjct: 313 PAFGVYSEIFSTFSGKV-LFGYKSLVWATISIAFLSFLVWLHHFFTMGQSGHINAVFGIA 371
Query: 616 TIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVIXA 768
+++I +PTG+KI+ + T+ +I ++ ++ L F+FLF +GG+TG++ A
Sbjct: 372 SMLIGIPTGVKIYDWMWTMLRGRIRFSVPMIYSLAFIFLFVIGGITGIMLA 422
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 122 bits (293), Expect = 1e-26
Identities = 72/233 (30%), Positives = 112/233 (48%)
Frame = +1
Query: 64 G*TVYPPLSSNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 243
G T Y P S A VD + ++ L G SS S ++P++
Sbjct: 138 GWTFYYPFS---AQSESGVDFYLAAILLLGFSSLLGNANFVATIYNLRAQGMSLWKMPIY 194
Query: 244 V*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVY 423
V +V + A ++L +R + S+F+PA GGDP+L+Q F F+ HP VY
Sbjct: 195 VWSVFAASVLNLFSLAGLTAATLLVLLERKIGLSWFNPAVGGDPVLFQQFFWFYSHPTVY 254
Query: 424 ILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAY 603
+++LP GI++ + S +K F +V AHH+FTVG +
Sbjct: 255 VMLLPYLGILAEVAS-TFARKPLFGYRQMVWAQMGIVVLGTMVWAHHMFTVGESTLFQIA 313
Query: 604 FTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVI 762
F T +IAVPTG+K+F + T+ G ++ + LGF+F F +GG+TGV+
Sbjct: 314 FAFFTALIAVPTGVKLFNIIGTLWGGKLQMKTPLYWVLGFIFNFLLGGITGVM 366
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 121 bits (292), Expect = 2e-26
Identities = 63/122 (51%), Positives = 75/122 (61%)
Frame = +1
Query: 43 VXNGAGTG*TVYPPLSSNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 222
V +GAGTG TVYPPL+S AH G SVDLAIF+LH+ ISS +
Sbjct: 119 VESGAGTGWTVYPPLASIQAHSGPSVDLAIFALHMTSISSLLGAINFIVTTLNMRTNGMT 178
Query: 223 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 402
+LPLFV A+ ITA + +T+LL DRN NTSFF+ AGGGDPILY+HLF F
Sbjct: 179 MHKLPLFVWAILITAVLLLLTLPVLSAGVTMLLLDRNFNTSFFEVAGGGDPILYEHLFWF 238
Query: 403 FG 408
FG
Sbjct: 239 FG 240
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 121 bits (292), Expect = 2e-26
Identities = 83/247 (33%), Positives = 116/247 (46%), Gaps = 13/247 (5%)
Frame = +1
Query: 58 GTG*TVYPP--LSSNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQ 231
G G T+YPP + S + + L + SL L I + +
Sbjct: 151 GAGWTLYPPQAILSGTPGQDWGIVLMLSSLILFIIGFTMGGLNYVVTVLQARTRGMTLMR 210
Query: 232 LPLFV*AV-GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPA----------GGGDPI 378
LPL V + T G++ +LL DR L TSFF P GGG P+
Sbjct: 211 LPLTVWGIFTATVMALLAFPALFVGSVMLLL-DRLLGTSFFMPTLVEMGQLSKYGGGSPL 269
Query: 379 LYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*A 558
L+QHLF FFGHPEVYI+ LP FGI+S +IS +K F F+V A
Sbjct: 270 LFQHLFWFFGHPEVYIVALPAFGIVSDLIS-THARKNIFGYRMMVWAIVAIGALSFVVWA 328
Query: 559 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 738
HH++ G+ +F + T+IIA+PT IK++ + T+ I+ +L LGF+ F
Sbjct: 329 HHMYVSGMYPYFGFFFATTTLIIAIPTAIKVYNWVLTLWHGDIHLTVPMLFALGFIITFV 388
Query: 739 VGGLTGV 759
GGLTG+
Sbjct: 389 NGGLTGL 395
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 121 bits (292), Expect = 2e-26
Identities = 76/238 (31%), Positives = 109/238 (45%)
Frame = +1
Query: 55 AGTG*TVYPPLSSNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQL 234
A G T+Y PLS I G D+ I + GI S + ++
Sbjct: 148 ADFGWTMYSPLSDAIHSPGLGSDMWIVGVGATGIGSVASAINMLTTILCLRAPGMTMFRM 207
Query: 235 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 414
P+F + + + A +L DR L +DPA GG +L+QHLF FFGHP
Sbjct: 208 PIFTWNIFVVSVLALLIFPLLLAAALGVLYDRKLGGHLYDPANGGS-LLWQHLFWFFGHP 266
Query: 415 EVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDT 594
EVY+L LP FGI+S II +K F V AHH+F G +
Sbjct: 267 EVYVLALPFFGIVSEII-PVFSRKPMFGYVGLIFATLSIGALSMAVWAHHMFVTGAVL-- 323
Query: 595 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVIXA 768
+F+ T +I+VPTG+K F + T+ I + ++ +GF+ F GGLTG++ A
Sbjct: 324 LPFFSFMTFLISVPTGVKFFNWVGTMWKGHITWETPMIWSVGFMATFLFGGLTGIMLA 381
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 120 bits (289), Expect = 4e-26
Identities = 74/231 (32%), Positives = 113/231 (48%)
Frame = +1
Query: 76 YPPLSSNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 255
YPPL+ G +D + IS+ S +++P+FV AV
Sbjct: 152 YPPLAGASFSPGLGLDFYTTVVTFMEISALVAAIELIATIFKCKVPGMSLNRMPIFVWAV 211
Query: 256 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 435
+ +F A +L DR FF A GDPIL+QHLF FFGHPEVYI+ +
Sbjct: 212 LVMSFMIVFALPPLVIASLMLALDRMAGMHFFT-AASGDPILWQHLFWFFGHPEVYIIFI 270
Query: 436 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 615
P G++S II ++ F F + HH+FT G+ +FT++
Sbjct: 271 PALGMVSSIIITFT-QRPIFGYIPIVLSIVAIGFIGFGLWVHHMFTAGLPQLGSNFFTAS 329
Query: 616 TIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVIXA 768
+ +IA+P+G++IF +AT+ G++ +L LGF +F +GGL+GV+ A
Sbjct: 330 SAMIAIPSGVQIFCWIATLWGSKPKLATPLLHVLGFFLIFIIGGLSGVMVA 380
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 120 bits (289), Expect = 4e-26
Identities = 71/233 (30%), Positives = 113/233 (48%), Gaps = 1/233 (0%)
Frame = +1
Query: 64 G*TVYPPLSSNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 243
G T+Y PL++ I G +DLA ++ L +S + ++P+F
Sbjct: 134 GWTLYAPLTARIYTPGIGLDLAALAIFLFSLSVTLGTINFLVTIAAMRAPGIGWFKMPMF 193
Query: 244 V*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF-DPAGGGDPILYQHLF*FFGHPEV 420
++ T +LL DRNL T FF +PAGG +L+ HLF FFGHPEV
Sbjct: 194 TWSILFTVILMLWAFPPLMVGGALLLLDRNLGTEFFLNPAGGA--LLWDHLFWFFGHPEV 251
Query: 421 YILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRA 600
YIL+ P G ++ +IS G K + F+V HH+F G +I TR
Sbjct: 252 YILLFPALGAMADVISTFSG-KPIYAKRYILTAFLIATIISFVVWMHHMFITGTNIYTRL 310
Query: 601 YFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGV 759
+++ TI+I++P + + + T++ ++ Y +L +G + F +GG TGV
Sbjct: 311 FYSITTILISIPFEMAVMSFIFTLYKGRLVYTVPMLFAVGALLNFIIGGSTGV 363
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 120 bits (288), Expect = 5e-26
Identities = 72/237 (30%), Positives = 107/237 (45%), Gaps = 1/237 (0%)
Frame = +1
Query: 52 GAGTG*TVYPPLSSNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQ 231
G TG T Y P S AH +V +F + G SS ++ +
Sbjct: 150 GLDTGWTFYTPYS---AHTTTTVAPVLFGAFIIGFSSIVTGINFIVTCHTMRAPGITWFK 206
Query: 232 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNL-NTSFFDPAGGGDPILYQHLF*FFG 408
+PLFV A+ T+ G + +L+T NL FDPA GGDP+L+QHLF F+
Sbjct: 207 MPLFVWAIYATSCIQVLATPVI-GLLLVLVTVENLFGFGMFDPARGGDPVLFQHLFWFYS 265
Query: 409 HPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDI 588
HP VYI++LP FG++S +++ +K F F HH+F G
Sbjct: 266 HPAVYIMVLPSFGVMSEVVA-TYSRKNIFGYRAVAYSSLGIAFVGFFAWGHHMFVSGQST 324
Query: 589 DTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGV 759
F T+I+ V T IK+F + T++ + + GF+F GG+TG+
Sbjct: 325 FAGGLFGVLTMIVGVFTAIKVFNWVGTVYKGAVEFKTPFAYFCGFLFFTVFGGMTGI 381
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 118 bits (284), Expect = 2e-25
Identities = 70/231 (30%), Positives = 108/231 (46%)
Frame = +1
Query: 76 YPPLSSNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 255
Y PL+S G ++D+ + L GIS+ S D+LP+ V
Sbjct: 165 YVPLTSLDYSAGANIDIYGLGMILLGISTTGGAANFVVTLLRMRAHGMSIDRLPIIVWGT 224
Query: 256 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 435
+ + A +L DRN T FFD A GG P+L+QHLF F HP VY+++L
Sbjct: 225 LTASVSNLVAVPSVSLAFLLLWLDRNAGTHFFDVAHGGRPLLWQHLFWMFAHPWVYVVVL 284
Query: 436 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 615
P GI+S + ++ F V HH+F GI A+F +A
Sbjct: 285 PAMGIVSDAL-PTFCRRPLVAYEAVAVSTVATMLIGFEVWVHHMFATGIAPLALAFFGAA 343
Query: 616 TIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVIXA 768
+++I++P+ + +F +ATI + + L GFV +F VGG++GV+ A
Sbjct: 344 SMLISIPSAVAVFAWIATIWTGRPVFRTPFLYFAGFVLMFVVGGVSGVMTA 394
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 117 bits (281), Expect = 4e-25
Identities = 70/231 (30%), Positives = 110/231 (47%), Gaps = 2/231 (0%)
Frame = +1
Query: 73 VYPPLS-SNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 249
+Y PLS + G +L +L L+G+SS + ++PLFV
Sbjct: 127 MYAPLSVETTVNYGLGTNLIQIALILSGLSSTLTGVNFVMTITKMKKV--PYLKMPLFVW 184
Query: 250 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 429
TA + +R T FFD A GG P+L+Q LF FFGHPEVYIL
Sbjct: 185 GFFTTAILMIIAMPSLTAGLVFAYLERLWGTPFFDSALGGSPVLWQQLFWFFGHPEVYIL 244
Query: 430 ILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFI-V*AHHIFTVGIDIDTRAYF 606
ILP G++S ++ + ++E F + V HH+FT + +
Sbjct: 245 ILPAMGLVSELL-PKMARREIFGYTAIALSSIAIAFLSALGVWMHHMFTAIDNTLVQIVS 303
Query: 607 TSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGV 759
++ T+ IA+P+G+K+ AT++G +I Y + + F+ +F +GG+TGV
Sbjct: 304 SATTMAIAIPSGVKVLNWTATLYGGEIRYKTPTILLISFIVMFLLGGITGV 354
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 116 bits (280), Expect = 5e-25
Identities = 71/235 (30%), Positives = 112/235 (47%), Gaps = 3/235 (1%)
Frame = +1
Query: 64 G*TVYPPLSSNIAHRGX-SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQ--L 234
G T P SSNI + G S D+ I S+ AGIS+ + +
Sbjct: 283 GWTFITPFSSNIKYTGVGSQDILILSVVFAGISTTISFTNLLITRRTLAMPGMRHRRVLM 342
Query: 235 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 414
P ++ +T A+ ++ DR+ T+FF+ A GGDPIL QHLF FFGHP
Sbjct: 343 PFVTISIFLTLRMLATITPVLGAAVIMMAFDRHWQTTFFEYAYGGDPILSQHLFWFFGHP 402
Query: 415 EVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDT 594
EVY+LI+P FG I+ I+ ++ ++V HH++ VG+D +
Sbjct: 403 EVYVLIIPTFGFINMIVPHNNTRR-VASKHHMIWAIYVMAYMGYLVWGHHMYLVGLDHRS 461
Query: 595 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGV 759
R +++ TI+I++P IK+ ++ + + L + F+ LF V G TG+
Sbjct: 462 RTMYSTITIMISMPATIKVVNWTLSLVNGALKVDLPFLFSMSFLLLFLVAGFTGM 516
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 115 bits (276), Expect = 1e-24
Identities = 67/229 (29%), Positives = 106/229 (46%)
Frame = +1
Query: 82 PLSSNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 261
PL+ G VD ++++ + + + ++ +LP V
Sbjct: 194 PLTELPYSPGVGVDYWMWAIQIGSVGTTLNAINMIATIVKLRAPGMTWSRLPFVVWTSLT 253
Query: 262 TAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPG 441
T A+ +L DR L T FF GG+ +LY +LF +GHPEVY ++LP
Sbjct: 254 TNIIALTAFPILGVALAMLGADRYLGTHFFTAGLGGNLMLYTNLFWIWGHPEVYFVVLPA 313
Query: 442 FGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATI 621
FG IS II +K F + V HH FT+G +F++AT+
Sbjct: 314 FGFISEIIPTF-AEKPLFGYATMVIATFAIGGISWGVWLHHFFTMGAGPGINIFFSTATM 372
Query: 622 IIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVIXA 768
++ +PTG+K+F T+ ++ + P +L LG +FL VGGLTG++ A
Sbjct: 373 LVGIPTGVKVFNWALTLWRGRLRFEPPMLWALGALFLLLVGGLTGMMLA 421
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 115 bits (276), Expect = 1e-24
Identities = 58/133 (43%), Positives = 80/133 (60%), Gaps = 2/133 (1%)
Frame = +1
Query: 43 VXNGAGTG*TVYPPLSSNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 222
+ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 136 IDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMD 195
Query: 223 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 402
+ +LPLFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+F F
Sbjct: 196 YSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWF 255
Query: 403 FGH--PEVYILIL 435
FG P + I+I+
Sbjct: 256 FGQIWPIIIIIII 268
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 114 bits (275), Expect = 2e-24
Identities = 72/236 (30%), Positives = 108/236 (45%)
Frame = +1
Query: 55 AGTG*TVYPPLSSNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQL 234
A TG YPPLS VD +S+ ++GI + F+++
Sbjct: 161 AKTGWLGYPPLSEKTFSPWVGVDYWNWSIQISGIGTIISSINFITTILKLRKKKLFFNKI 220
Query: 235 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 414
+F+ + + + DR L+T F+ GG +LY +L +GHP
Sbjct: 221 SIFMWTCLCSNILILISFPILTILLFQIFLDRTLSTHFYSSFYGGQQMLYINLIWAWGHP 280
Query: 415 EVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDT 594
EVYILILP FGI S IIS K F F+V HH FT+G +
Sbjct: 281 EVYILILPSFGIFSEIISY-ICVKSVFSYISLIYATISITVLSFLVWLHHFFTMGSGYLS 339
Query: 595 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVI 762
+F+ +T+IIA+PTG+KIF + TI + + + F+ +F++GG +GVI
Sbjct: 340 NIFFSISTMIIAIPTGVKIFNWIFTILFSNFKKDILFFWFISFIIIFSIGGFSGVI 395
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 112 bits (270), Expect = 8e-24
Identities = 60/131 (45%), Positives = 75/131 (57%)
Frame = +1
Query: 43 VXNGAGTG*TVYPPLSSNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 222
V GAGTG TVY PL+ +H G +VDLAIFSLHL+G SS
Sbjct: 124 VEAGAGTGWTVYFPLAGIQSHSGPAVDLAIFSLHLSGFSSLLGAINFITTFINMRTIGMK 183
Query: 223 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 402
++ +PLF AV TA A +T+ + DRN NTSFF+ AGGGD +LYQHLF +
Sbjct: 184 YENVPLFAWAVLFTAILLLLSLPVLAAGLTMGIFDRNFNTSFFEYAGGGDAVLYQHLFYW 243
Query: 403 FGHPEVYILIL 435
+ HPEV I+ L
Sbjct: 244 WNHPEVKIICL 254
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 111 bits (268), Expect = 1e-23
Identities = 68/242 (28%), Positives = 101/242 (41%)
Frame = +1
Query: 43 VXNGAGTG*TVYPPLSSNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 222
V GA TG T Y P S+ + V L F L G SS
Sbjct: 140 VQGGADTGWTFYTPYSTTTITKVVPVLLGAFIL---GFSSILTGLNFIVTTHTMRAPGMG 196
Query: 223 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 402
+ +LPLFV ++ T+ ++ ++ + FDPA GGDP+L+QH F F
Sbjct: 197 WTRLPLFVWSIYATSVIQILATPVLGMSLLLVAVEHAFGWGIFDPARGGDPVLFQHFFWF 256
Query: 403 FGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGI 582
+ HP VYI++LP +IS ++ +K F F HH+FT G
Sbjct: 257 YSHPAVYIMVLPAMAVISEVVC-AFSRKNIFGYKAVAYSSLGIAFVGFFTWGHHMFTSGQ 315
Query: 583 DIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVI 762
F ++ + + T IK+F AT++ I + GF+F GG+TG+
Sbjct: 316 SAFNGGVFGVLSMFVGIFTAIKVFNWTATLYKGSIYFATPFAYFAGFLFFLVFGGMTGIA 375
Query: 763 XA 768
A
Sbjct: 376 LA 377
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 111 bits (268), Expect = 1e-23
Identities = 70/236 (29%), Positives = 106/236 (44%)
Frame = +1
Query: 61 TG*TVYPPLSSNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPL 240
+G +YPPLSS + G + D + + IS+ S ++P+
Sbjct: 140 SGWFMYPPLSSTLGAPGINSDFWLIGITFVEISAIAAAVEITVTVLRYRAPGMSLSKMPI 199
Query: 241 FV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 420
F +TA +L +R + FF A GGD +L+QHLF FGHPEV
Sbjct: 200 FAWYALVTAVMILTGFPPLILGSILLELERAFDMPFFQAAAGGDALLWQHLFWLFGHPEV 259
Query: 421 YILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRA 600
YI+ LP G IS I+ + F + HH+FT GI A
Sbjct: 260 YIIFLPAAGAISTIL-PVMARTGLLGYGWIVAAAVALGVLSFGLWVHHMFTTGIPHLGLA 318
Query: 601 YFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVIXA 768
+F++A+ ++AVPT +++F + T+ + +L L F F +GGLTGV+ A
Sbjct: 319 FFSAASTLVAVPTAVQLFIWIGTLAKGAPRLHLPMLWLLAFFATFVIGGLTGVMVA 374
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 110 bits (264), Expect = 4e-23
Identities = 69/232 (29%), Positives = 104/232 (44%)
Frame = +1
Query: 64 G*TVYPPLSSNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 243
G T Y PL+ + G SV + L+ G+ S ++P+F
Sbjct: 145 GWTFYYPLTMDGNQTGVSVFMVAVILN--GLGSLLGSANFAATIVNLRAPGMGLWKMPVF 202
Query: 244 V*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVY 423
++ T+ A + + L S F+P GG P+LYQ F F+ HP VY
Sbjct: 203 AWSIFATSILQLLTLGGLTAAALLTYLEIKLGLSMFNPGIGGVPVLYQQFFWFYSHPAVY 262
Query: 424 ILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAY 603
+++LP GI + + S +K F IV HH+F VGI +
Sbjct: 263 VMLLPYLGIGAEVAS-TMARKPLFGYRVMVYSMLAIVLVSCIVWLHHMFAVGIPEAWQIA 321
Query: 604 FTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGV 759
F +T+I+AVPTG+KIF + T+ G +I +GF+F F +GG+TGV
Sbjct: 322 FMISTLIVAVPTGVKIFNLIGTLWGGRILMRMPTYWLIGFIFNFLIGGITGV 373
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 110 bits (264), Expect = 4e-23
Identities = 72/237 (30%), Positives = 108/237 (45%), Gaps = 1/237 (0%)
Frame = +1
Query: 61 TG*TVYPPLSSNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPL 240
+G +YPPL+S + G + D + + IS+ S D++P+
Sbjct: 140 SGWFMYPPLASTLGSPGINSDFWLLGITFVEISAIAAAVEIVVTVLRFRAPGMSLDRMPI 199
Query: 241 FV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 420
+ +TA +L +R FF A GGD +L+QHLF FGHPEV
Sbjct: 200 YGWYALVTATMILTGFPPLILGSILLELERAFGLPFFQVAEGGDSLLWQHLFWLFGHPEV 259
Query: 421 YILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRA 600
YI+ LP G IS I+ + E F + HH+FT GI A
Sbjct: 260 YIIFLPAAGAISTIL-PVMARTELIGYRWVVAAAISLAVLSFGLWVHHMFTTGIPHMGLA 318
Query: 601 YFTSATIIIAVPTGIKIFR*LATI-HGTQINYNPNIL*RLGFVFLFTVGGLTGVIXA 768
F++A+ ++AVPT +++F + T+ GT P ++ L F F +GGLTGV+ A
Sbjct: 319 LFSAASTLVAVPTAVQLFAWIGTLWRGTPEMRLP-MMWILAFFATFVIGGLTGVMVA 374
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 109 bits (261), Expect = 1e-22
Identities = 68/234 (29%), Positives = 110/234 (47%), Gaps = 4/234 (1%)
Frame = +1
Query: 79 PPLSSNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVG 258
PPL++ G + D + + IS+ + ++P+F A+
Sbjct: 215 PPLTTETYSPGYNADFWLLGIGFIEISAIAGAIEIIVGILRTRSPGMTLGRMPVFAWAML 274
Query: 259 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILP 438
+ A A +L +R + FF GGDP+L+QHLF FFGHPEVYI+ LP
Sbjct: 275 VFALMIVFAFPAVILATALLELERAFHWPFFAAHLGGDPLLWQHLFWFFGHPEVYIIFLP 334
Query: 439 GFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSAT 618
G++S I+ + F + HH+FT GI + ++F +A+
Sbjct: 335 AAGMVSMIV-PTMARTPLVGYRFVVLALVGTAFLSFGLWVHHMFTTGIPQLSLSFFQAAS 393
Query: 619 IIIAVPTGIKIFR*LATI-HGT---QINYNPNIL*RLGFVFLFTVGGLTGVIXA 768
+A+P+G+++F +AT G ++ L LGF+F+F +GGLTGV+ A
Sbjct: 394 TAVAIPSGMQVFAWIATFARGRATGRVRIATPTLFILGFLFIFVLGGLTGVMVA 447
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 107 bits (258), Expect = 2e-22
Identities = 59/136 (43%), Positives = 80/136 (58%)
Frame = +1
Query: 43 VXNGAGTG*TVYPPLSSNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 222
+ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 136 IDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMD 195
Query: 223 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 402
+ +LPLFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+ F
Sbjct: 196 YSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHI--F 253
Query: 403 FGHPEVYILILPGFGI 450
+ +P V ILI GI
Sbjct: 254 YKNP-VLILIWLTSGI 268
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 106 bits (254), Expect = 7e-22
Identities = 68/231 (29%), Positives = 107/231 (46%), Gaps = 1/231 (0%)
Frame = +1
Query: 70 TVYPPLSSNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 249
T YPP S I H + FS+ L G +S +++L +FV
Sbjct: 130 TGYPPYSI-ITHGNTA--FYTFSVLLLGFASILGGVNFLTTVTFMRAPGIGWNKLNIFVW 186
Query: 250 AVGITAFXXXXXXXXXAG-AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYI 426
A + AF G A+T+L D+ + T FFD A GGD + YQ+LF F+ HP VY+
Sbjct: 187 AT-LAAFVLQLIFVPVLGTAVTMLTFDKYIGTHFFDAAAGGDALTYQNLFWFYSHPAVYV 245
Query: 427 LILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYF 606
+ LP ++ I++ + V HH++ G+ R
Sbjct: 246 IFLPFMAMVFEIVATFARNRVFNYKMVVYGGIGGIVLLSGEVWIHHLYVTGMPDWLRVGQ 305
Query: 607 TSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGV 759
T++I++P G+ + + T++G I++ +L LGF+FLF +GGLTGV
Sbjct: 306 MVTTVLISIPVGLMVIGLVGTLYGGSISFETPMLYALGFIFLFLIGGLTGV 356
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 106 bits (254), Expect = 7e-22
Identities = 74/253 (29%), Positives = 112/253 (44%), Gaps = 14/253 (5%)
Frame = +1
Query: 52 GAGTG*TVYP---PLSSNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 222
G G T YP L+ G + + + G SS +
Sbjct: 159 GPAAGWTSYPVLADLAQAAPGSGTAQTYWLLGVTFVGFSSMMGSINYMTTIINMRAPGMT 218
Query: 223 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAG-----------GG 369
F +LP+ + + ITA + + DR T FF P+G GG
Sbjct: 219 FFRLPMTIWGLFITAILQAFALPVLTAGGFMQVADRLFGTCFFYPSGLVINNAAPTVGGG 278
Query: 370 DPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFI 549
P+L+QHLF F+ HP VYI++LP G++S ++S +K F FI
Sbjct: 279 QPLLWQHLFWFYSHPAVYIMLLPIMGMVSDMLSC-MCRKPLFGYKPMVFSMSAIASLGFI 337
Query: 550 V*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVF 729
V HH+FT G++ F +T++IA+P+ IK F ATI G ++ +N L + F+
Sbjct: 338 VWGHHMFTSGMNPAVGMAFMVSTMMIALPSAIKTFNWTATIWGGKLEFNTVTLNCIAFLS 397
Query: 730 LFTVGGLTGVIXA 768
+F VGGL+G+ A
Sbjct: 398 MFIVGGLSGIFMA 410
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 105 bits (252), Expect = 1e-21
Identities = 66/230 (28%), Positives = 105/230 (45%)
Frame = +1
Query: 79 PPLSSNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVG 258
PP S I+ G + D+ IF L + GISS S Q+PL +
Sbjct: 133 PPYSV-ISAPGPAADMWIFGLKILGISSILGSINFIVTILKCKHPDMSLGQVPLLAWSYL 191
Query: 259 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILP 438
++ A A+ +LLTDR + FF+PA GGDPI Y HLF F HPEVY+L++P
Sbjct: 192 SSSLIVLVALPTFAAALLMLLTDRLGVSGFFNPAVGGDPIAYAHLFWFTFHPEVYVLVIP 251
Query: 439 GFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSAT 618
G++ ++ + +K + F AHH+F G+ + F T
Sbjct: 252 AIGMMYEMVPR-FSRKPIYSYNSGLFAFVLLTIVGFSSWAHHMFATGMSFTEKTVFMLGT 310
Query: 619 IIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVIXA 768
+ + + +F +AT+ +I ++ ++ +G + LF G GV+ A
Sbjct: 311 LAAVPASAMHVFNFVATMWNGRIRFDSPMMWSIGGIALFFSAGAGGVLNA 360
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 103 bits (247), Expect = 5e-21
Identities = 57/102 (55%), Positives = 61/102 (59%)
Frame = +1
Query: 52 GAGTG*TVYPPLSSNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQ 231
GAGTG TVYPPL+ N+AH G SVDL IFSLHLAGISS S Q
Sbjct: 110 GAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIMNMKPPAISQYQ 169
Query: 232 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP 357
PLFV AV ITA A IT+LLTDRNLNT+FFDP
Sbjct: 170 TPLFVWAVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP 211
>UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus crystallinus (Phantom midge) (Tipula
crystallina)
Length = 207
Score = 102 bits (244), Expect = 1e-20
Identities = 48/63 (76%), Positives = 56/63 (88%)
Frame = +1
Query: 580 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGV 759
+ + TRAYFTSAT+IIAVPTGIKIF LAT+HGTQINY+P++L LGFVFLFTVGGLTGV
Sbjct: 1 LTLHTRAYFTSATMIIAVPTGIKIFSWLATLHGTQINYSPSLLWALGFVFLFTVGGLTGV 60
Query: 760 IXA 768
+ A
Sbjct: 61 VLA 63
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 100 bits (239), Expect = 5e-20
Identities = 61/194 (31%), Positives = 93/194 (47%), Gaps = 11/194 (5%)
Frame = +1
Query: 220 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAG-----------G 366
S ++P+ A IT+ A +L DR TSFF P+G G
Sbjct: 214 SLMRMPICTWAWFITSCIALLAFAVLLPACILLCLDRVAGTSFFIPSGLVFNDHVIPHGG 273
Query: 367 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXF 546
G +L+QHLF FFGHPEVYI ILP GI+SHI+ ++ +
Sbjct: 274 GSALLWQHLFWFFGHPEVYIAILPAMGIVSHILINSM-RRPLLSHRVVIGSMISIGFLSY 332
Query: 547 IV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFV 726
+V HH+F G++ + F+ T+II +P + L +++G+++ N L LGF+
Sbjct: 333 VVWGHHMFVSGMNPLSSLVFSFPTLIITIPATVLTLIWLGSLYGSRLRINSASLFALGFI 392
Query: 727 FLFTVGGLTGVIXA 768
+F GG++G A
Sbjct: 393 SMFVSGGVSGFFLA 406
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 99 bits (238), Expect = 6e-20
Identities = 63/236 (26%), Positives = 106/236 (44%)
Frame = +1
Query: 61 TG*TVYPPLSSNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPL 240
+G +YPPL++ G D+ + L ++S + +PL
Sbjct: 168 SGWFMYPPLATQ--DEGLGSDIWLLGLSFIEVASIAAAVELIVGVLKCRPPGMRVNLMPL 225
Query: 241 FV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 420
+ V + + +R + FFDP GGDP+L+QHLF FGHPEV
Sbjct: 226 YAWYVLVVGGMILFAFPPLIAGDLLFEMERGFDWPFFDPERGGDPLLWQHLFWIFGHPEV 285
Query: 421 YILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRA 600
YI+ LP + + I+ ++ F + HH+FT G+ +
Sbjct: 286 YIIFLPLIALAAMIV-PTAARQPIVGYSWIVLSAVGTGFLSFGLWVHHMFTTGLPALSLG 344
Query: 601 YFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVIXA 768
+F++A+ + +PTGI++F +AT+ ++ +L G + +FT GGLTGV+ A
Sbjct: 345 FFSAASEAVVIPTGIQLFAFVATLMVGRVKMILPMLWIAGGLAVFTAGGLTGVMVA 400
>UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1;
Chaoborus punctipennis|Rep: Cytochrome c oxidase subunit
I - Chaoborus punctipennis
Length = 205
Score = 97.1 bits (231), Expect = 4e-19
Identities = 45/55 (81%), Positives = 50/55 (90%)
Frame = +1
Query: 583 DIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGG 747
D+DTRAYFTSAT+IIAVPTGIKIF LAT+HGTQINY P++L LGFVFLFTVGG
Sbjct: 1 DVDTRAYFTSATMIIAVPTGIKIFSWLATLHGTQINYTPSLLWALGFVFLFTVGG 55
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 90.6 bits (215), Expect = 4e-17
Identities = 52/187 (27%), Positives = 88/187 (47%), Gaps = 11/187 (5%)
Frame = +1
Query: 232 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF-----------DPAGGGDPI 378
+P+F ++ +T + A+ IL +D L T++F D G +
Sbjct: 192 IPIFSLSINLTVWMMLFAFAALLAALMILASDHILGTTYFQYSIDGTTMATDADNPGASL 251
Query: 379 LYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*A 558
L+ HLF FFGHPEVYI+ P G+++ G++ F+V
Sbjct: 252 LWAHLFWFFGHPEVYIVFFPALGVMAECFQTFTGRR-LVGRKWFIISMVLVALQSFVVWM 310
Query: 559 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 738
HH+F GI++ + F + TI I++P + +F + T+ ++ + L LG + LF
Sbjct: 311 HHMFLTGINLPIKTIFMATTIGISLPFDLMVFSLIYTMAKGRVRFTTPFLFSLGALILFI 370
Query: 739 VGGLTGV 759
+GG+TGV
Sbjct: 371 IGGITGV 377
>UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6;
Digenea|Rep: Cytochrome c oxidase subunit I -
Echinostoma hortense
Length = 154
Score = 85.4 bits (202), Expect = 1e-15
Identities = 40/93 (43%), Positives = 52/93 (55%)
Frame = +1
Query: 400 FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVG 579
FFGHPEVY+LILP FGI+SHI F +V AHH+F VG
Sbjct: 1 FFGHPEVYVLILPVFGIVSHICMTFTNNDSLFGYYGLVLAMLAIVCLGSVVWAHHMFMVG 60
Query: 580 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHG 678
D+ T +F+S T++I +PTGIK+F L + G
Sbjct: 61 YDVHTAVFFSSVTMVIGIPTGIKVFSWLIMLGG 93
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 84.6 bits (200), Expect = 2e-15
Identities = 40/65 (61%), Positives = 50/65 (76%)
Frame = +1
Query: 574 VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLT 753
VG+ + RAYFTSAT+IIA+PTGIK F LAT G I ++P +L LGF+FLFTVGGLT
Sbjct: 296 VGMXVXPRAYFTSATMIIAIPTGIKAFSWLATXXGGTIKWDPPMLWALGFIFLFTVGGLT 355
Query: 754 GVIXA 768
G++ A
Sbjct: 356 GIVLA 360
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 82.6 bits (195), Expect = 1e-14
Identities = 65/233 (27%), Positives = 97/233 (41%)
Frame = +1
Query: 61 TG*TVYPPLSSNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPL 240
TG TVY PLSS D A ++ L GI + LPL
Sbjct: 154 TGWTVYEPLSSFKFTPYLGADTAAAAVVLRGIGTIIASTEILATIFKARAKGYRMMNLPL 213
Query: 241 FV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 420
FV AV A G +LL ++ S++ GG +++++LF +FGHPEV
Sbjct: 214 FVWAVFWVAAISWFVFPEITGLFFLLLVGNLMHASYYISNYGG-ALMWENLFWYFGHPEV 272
Query: 421 YILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRA 600
Y+L+LPG G + +S + + +V HH F GI
Sbjct: 273 YLLLLPGTGAMFDYLS-NLNHRPPYLKKWMIAAMGAISVDSVMVFLHHTFMTGIVFAWLM 331
Query: 601 YFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGV 759
+ T I++PT + I +AT+ G + + IL L F +GG++GV
Sbjct: 332 ADSIFTETISIPTSMLIVGLIATMIGGRHKFQTPILFALAASTSFMIGGVSGV 384
>UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1;
Diplonema papillatum|Rep: Cytochrome c oxidase subunit I
- Diplonema papillatum
Length = 287
Score = 82.2 bits (194), Expect = 1e-14
Identities = 41/117 (35%), Positives = 68/117 (58%)
Frame = +1
Query: 418 VYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTR 597
VY++ILP FG++SH + + G + + V AHH+FTVG+D+DTR
Sbjct: 1 VYVIILPVFGLVSHSLHRG-GLFSLYNMLGMVYAMIAIAVVGYFVWAHHMFTVGLDVDTR 59
Query: 598 AYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVIXA 768
YF+SAT++IA+PT IK+F + + + + + F+ +F +GG+TG++ A
Sbjct: 60 VYFSSATLLIALPTSIKVFSWMVGLRRMALASSAAWY-VVAFLLMFLLGGVTGLVLA 115
>UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1;
Harmonia axyridis|Rep: Cytochrome c oxidase subunit 2 -
Harmonia axyridis (Multicolored Asian lady beetle)
Length = 193
Score = 73.3 bits (172), Expect = 6e-12
Identities = 30/57 (52%), Positives = 36/57 (63%)
Frame = +3
Query: 387 TFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNWVIRIHCLS 557
+ ++IFW+S SLYFN IWYNF YY+T K K W F NNLCY S W I +S
Sbjct: 2 SLVMIFWSSSSLYFNSPSIWYNFPYYYTSKSGKNCLWFFSNNLCYISYWTSSICSMS 58
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 72.9 bits (171), Expect = 8e-12
Identities = 39/83 (46%), Positives = 48/83 (57%)
Frame = +1
Query: 82 PLSSNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 261
PL+S+IAH G SVD+AIFSLHLAG+SS + D++PLF+ AV I
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVSSILGSVNFMTTVINMRAKGMTLDRVPLFIWAVFI 131
Query: 262 TAFXXXXXXXXXAGAITILLTDR 330
T AGAIT+LLTDR
Sbjct: 132 TTVLLLLSLPVLAGAITMLLTDR 154
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 70.1 bits (164), Expect = 6e-11
Identities = 40/87 (45%), Positives = 46/87 (52%)
Frame = +1
Query: 43 VXNGAGTG*TVYPPLSSNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 222
V GAGTG TVYPPLS +H G SVDLAIFSLHL+GISS +
Sbjct: 118 VEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMT 177
Query: 223 FDQLPLFV*AVGITAFXXXXXXXXXAG 303
+LPLFV A+ +TA AG
Sbjct: 178 LHKLPLFVWAIFVTAILLLLSLPVLAG 204
>UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2;
Toxoplasma gondii|Rep: Cytochrome c oxidase subunit I -
Toxoplasma gondii
Length = 192
Score = 68.5 bits (160), Expect = 2e-10
Identities = 34/70 (48%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Frame = +1
Query: 556 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGT-QINYNPNIL*RLGFVFL 732
AHH+ TVG++ DTRAYF++ TI+IA+PTG KIF L T + ++ L F+ L
Sbjct: 2 AHHMMTVGLEGDTRAYFSAMTIMIAIPTGTKIFNWLGTYMASHNTTRTIDLWAALCFILL 61
Query: 733 FTVGGLTGVI 762
FT+GG TGV+
Sbjct: 62 FTLGGTTGVV 71
>UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome
oxidase; n=1; Acidithiobacillus ferrooxidans|Rep:
Sub-unit I of an aa3-type cytochrome oxidase -
Thiobacillus ferrooxidans (Acidithiobacillus
ferrooxidans)
Length = 627
Score = 68.1 bits (159), Expect = 2e-10
Identities = 59/239 (24%), Positives = 88/239 (36%)
Frame = +1
Query: 52 GAGTG*TVYPPLSSNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQ 231
G TG YPPL+ N G + + ++S S +
Sbjct: 218 GFQTGWWGYPPLAQN---SGSGIVWYVLGAATILVASLLGAINIAGTMVYMRAKGMSLGR 274
Query: 232 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 411
+P+FV + A + L+D + F+ G P+ Y F F H
Sbjct: 275 VPIFVWGLFAAATTLVVESPATYTGALMDLSDMIAGSHFYT-GPTGHPLAYLDQFWFLFH 333
Query: 412 PEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDID 591
PEVY+ ILP F I I+ K+ F + HH FT D
Sbjct: 334 PEVYVFILPAFAIWLEIL-PAAAKRPLFARGWAIAGLVGVSMSGAMSGVHHYFTAVSDA- 391
Query: 592 TRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVIXA 768
F + T +++PTG + TI G ++ N +L L + F +GGLTG+ A
Sbjct: 392 RMPIFMTITETVSIPTGFIYLSAIGTIWGGRLRINAAVLLVLMAMMNFLIGGLTGIFNA 450
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 67.3 bits (157), Expect = 4e-10
Identities = 44/120 (36%), Positives = 51/120 (42%)
Frame = +1
Query: 43 VXNGAGTG*TVYPPLSSNIAHRGXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 222
+ G G VYPP SS +AH +VDL IF LHLAGISS +
Sbjct: 108 IGXGVGXXWXVYPPXSSGLAHSSGAVDLGIFXLHLAGISSXLGSMNFLVTLGNMKXKGLN 167
Query: 223 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 402
+ LF A AIT+L R N SFF P G P + F F
Sbjct: 168 YGNFSLFCWXXVXXXXXLILSXPVLAAAITMLXXXRXXNXSFFXPXXXGXPXXFPTFFXF 227
>UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 329
Score = 64.9 bits (151), Expect = 2e-09
Identities = 32/68 (47%), Positives = 47/68 (69%), Gaps = 2/68 (2%)
Frame = +1
Query: 565 IFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQ--INYNPNIL*RLGFVFLFT 738
++T G+++DTRA+FTS TI+I++PTG K+F L T T I ++ ++L L F+ FT
Sbjct: 1 MYTTGLEVDTRAFFTSTTILISIPTGTKVFNWLCTYMSTNFGITHSSSLL-SLLFICTFT 59
Query: 739 VGGLTGVI 762
GG TGVI
Sbjct: 60 FGGTTGVI 67
>UniRef50_Q6RCN4 Cluster: Cytochrome c oxidase subunit I; n=1;
Bucephalid sp. KH-2004|Rep: Cytochrome c oxidase subunit
I - Bucephalid sp. KH-2004
Length = 121
Score = 62.5 bits (145), Expect = 1e-08
Identities = 32/71 (45%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Frame = +1
Query: 547 IV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL-*RLGF 723
+V HH+F VG D+ T +F+S T+II VPTGIK+F L + ++ N I+ +GF
Sbjct: 26 VVWLHHMFMVGFDVKTAVFFSSVTMIIGVPTGIKVFGWLYMLGTSRHCLNTVIVWWIIGF 85
Query: 724 VFLFTVGGLTG 756
+FLFT+GG G
Sbjct: 86 IFLFTMGGRQG 96
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 60.5 bits (140), Expect = 4e-08
Identities = 29/56 (51%), Positives = 32/56 (57%)
Frame = +3
Query: 243 CMSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFWT 410
CM C +Y TCFS S+Y IIN K KY IF W P +STFILIFWT
Sbjct: 97 CMICCNYCYFITSFFTCFSSSHYYIINWPKSKYFIFWPNWSSSPYSLSTFILIFWT 152
Score = 53.6 bits (123), Expect = 5e-06
Identities = 25/32 (78%), Positives = 26/32 (81%)
Frame = +1
Query: 43 VXNGAGTG*TVYPPLSSNIAHRGXSVDLAIFS 138
V NGAGTG TVYPPLSS AH G SVDLAI+S
Sbjct: 34 VENGAGTGWTVYPPLSSGTAHAGASVDLAIYS 65
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 58.8 bits (136), Expect = 1e-07
Identities = 31/70 (44%), Positives = 40/70 (57%)
Frame = +1
Query: 226 DQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FF 405
DQ+ LF ++ IT AG IT+LL+DRN N FF GG PIL+Q++ F
Sbjct: 12 DQINLFSWSISITVNLSILSLPMLAGTITMLLSDRNFNKFFFILIGGEYPILHQYMLWLF 71
Query: 406 GHPEVYILIL 435
GH +V LIL
Sbjct: 72 GHTDVLFLIL 81
>UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1;
Taenia saginata|Rep: Cytochrome c oxidase subunit I -
Taenia saginata (Beef tapeworm)
Length = 147
Score = 56.8 bits (131), Expect = 6e-07
Identities = 24/50 (48%), Positives = 36/50 (72%)
Frame = +1
Query: 559 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL 708
HH+FTVG+D++T +F+S T+II VPTGIK+F L + +++N IL
Sbjct: 53 HHMFTVGLDVNTAVFFSSVTMIIRVPTGIKVFTWLYMLSNSRVNKXDPIL 102
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 56.8 bits (131), Expect = 6e-07
Identities = 27/40 (67%), Positives = 29/40 (72%)
Frame = +1
Query: 43 VXNGAGTG*TVYPPLSSNIAHRGXSVDLAIFSLHLAGISS 162
V G G G TVYPPL+S + H G SVD AIFSLHLAG SS
Sbjct: 13 VEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGASS 52
>UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820;
n=1; Placozoan sp. BZ49|Rep: Putative uncharacterized
protein ORF820 - Placozoan sp. BZ49
Length = 820
Score = 54.8 bits (126), Expect = 2e-06
Identities = 23/30 (76%), Positives = 29/30 (96%)
Frame = +1
Query: 565 IFTVGIDIDTRAYFTSATIIIAVPTGIKIF 654
++ VG+D+DTRAYFT+AT+IIAVPTGIKIF
Sbjct: 1 MYVVGMDVDTRAYFTAATMIIAVPTGIKIF 30
>UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus obscuripes
Length = 206
Score = 50.8 bits (116), Expect = 4e-05
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = +1
Query: 586 IDTRAYFTSATIIIAVPTGIKIFR*LAT 669
+DTRAYFTSAT+IIAVPTGIKIF LAT
Sbjct: 2 VDTRAYFTSATMIIAVPTGIKIFSWLAT 29
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 48.4 bits (110), Expect = 2e-04
Identities = 25/51 (49%), Positives = 29/51 (56%)
Frame = +3
Query: 246 MSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFIL 398
M C +YS +TC WSYYN IN SKLKYI+F F+ST IL
Sbjct: 84 MICSNYSFTIIIVSTCSCWSYYNTINWSKLKYILFWPSSSWGSYFMSTPIL 134
>UniRef50_Q9MFX8 Cluster: Cytochrome oxidase I; n=5; Echinometra
lucunter|Rep: Cytochrome oxidase I - Echinometra
lucunter
Length = 199
Score = 46.4 bits (105), Expect = 8e-04
Identities = 23/62 (37%), Positives = 31/62 (50%)
Frame = +3
Query: 387 TFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNWVIRIHCLSSSY 566
T ILI W S+Y F IW +F+ T FW+ N L + SNW I C+S +
Sbjct: 1 TPILILWPPSSIYSYFAGIWNDFARNRTLFSNASTFWVPGNGLRHDSNWSPSIPCMSPPH 60
Query: 567 IH 572
+H
Sbjct: 61 VH 62
>UniRef50_Q5VI63 Cluster: SoxB; n=3; Sulfolobaceae|Rep: SoxB -
Acidianus brierleyi
Length = 148
Score = 46.0 bits (104), Expect = 0.001
Identities = 23/84 (27%), Positives = 40/84 (47%)
Frame = +1
Query: 400 FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVG 579
FFGHP VY + P FG + + I K+ F ++ HH+ T
Sbjct: 2 FFGHPVVYYVPFPLFGALYYYI-PIYAKRSLFSEKWARWNIFLLAIGSMLIWVHHLQTFP 60
Query: 580 IDIDTRAYFTSATIIIAVPTGIKI 651
+ +D RA+ T +T+++A +G+ +
Sbjct: 61 LPVDLRAWITVSTLVLASGSGLTV 84
>UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7;
Locustacarus buchneri|Rep: Cytochrome oxidase subunit 1
- Locustacarus buchneri
Length = 185
Score = 44.0 bits (99), Expect = 0.004
Identities = 29/92 (31%), Positives = 43/92 (46%)
Frame = +3
Query: 258 DYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNFT 437
+Y+ TT S S +N N SKL++I+ S PN I ILI T L+ N T
Sbjct: 94 NYNNTTDYFTTSSSRSNHNTTNSSKLQHILLRSFGGSGPNPIPASILILRTPSGLHSNST 153
Query: 438 RIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNW 533
I ++ +K N ++NNL ++ W
Sbjct: 154 SIRNRITHLHNIFSQKSNILYYKNNLRHSIYW 185
>UniRef50_Q9TAP7 Cluster: Cytochrome oxidase subunit 1; n=1;
Clonorchis sinensis|Rep: Cytochrome oxidase subunit 1 -
Clonorchis sinensis
Length = 120
Score = 42.7 bits (96), Expect = 0.010
Identities = 23/44 (52%), Positives = 29/44 (65%)
Frame = -3
Query: 680 VPCIVASHLKILIPVGTAIIIVAEVKYARVSISIPTVNI**AQT 549
VP + +H K LIPVGT +I+V E+K V S PTVN+ AQT
Sbjct: 51 VPASMYNHEKTLIPVGTPMIMVTELKKTAVPKSSPTVNMWWAQT 94
>UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Cytochrome aa3 subunit
1) (Oxidase aa(3) subunit 1); n=5; Sulfolobaceae|Rep:
Quinol oxidase subunit 1 (EC 1.10.3.-) (Quinol oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Oxidase aa(3)
subunit 1) - Sulfolobus acidocaldarius
Length = 517
Score = 41.5 bits (93), Expect = 0.022
Identities = 25/92 (27%), Positives = 42/92 (45%)
Frame = +1
Query: 376 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 555
+L+ LF F+GHP VY + P FG + + I Q G + + V
Sbjct: 224 LLWAILFWFYGHPVVYYVPFPLFGALYYYIPQYAG-RSLYSEKWARWNIYLLAIGTMGVW 282
Query: 556 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKI 651
HH+ T + I R + +T+I+A +G+ +
Sbjct: 283 VHHLQTWPLPIVLREWVNLSTLILATGSGLTV 314
>UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2;
Eutetramorium sp. BLF m1|Rep: Cytochrome c oxidase
subunit I - Eutetramorium sp. BLF m1
Length = 201
Score = 40.7 bits (91), Expect = 0.039
Identities = 27/78 (34%), Positives = 35/78 (44%)
Frame = +1
Query: 109 GXSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 288
G L IFSL + S + D++ L ++ ITA
Sbjct: 124 GSXXXLXIFSLXIXXXSXIFSAXNFISXIINMRHTMLTMDKISLLSWSILITAVLLLLSL 183
Query: 289 XXXAGAITILLTDRNLNT 342
AGAIT+LLTDRN+NT
Sbjct: 184 PVLAGAITMLLTDRNMNT 201
>UniRef50_Q981A5 Cluster: Heme bearing subunit I of the terminal
oxidase; n=8; Sulfolobaceae|Rep: Heme bearing subunit I
of the terminal oxidase - Sulfolobus solfataricus
Length = 593
Score = 39.5 bits (88), Expect = 0.090
Identities = 26/111 (23%), Positives = 43/111 (38%)
Frame = +1
Query: 364 GGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXX 543
G DPI Q F FGH VY+ +P G + +++ K +
Sbjct: 233 GLDPIANQIAFWIFGHAIVYMAWVPAVGAL-YLLIPMLANKPLYSDRMGRISALLYLIFS 291
Query: 544 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYN 696
V HH++ V + I + T + +P+ + F AT G + +N
Sbjct: 292 NNVPIHHLYMVNLPIALKLLQEVLTYSVVIPSMMTFFNLWATAKGADVKWN 342
>UniRef50_A3H8Y4 Cluster: Cytochrome-c oxidase precursor; n=1;
Caldivirga maquilingensis IC-167|Rep: Cytochrome-c
oxidase precursor - Caldivirga maquilingensis IC-167
Length = 529
Score = 39.5 bits (88), Expect = 0.090
Identities = 30/143 (20%), Positives = 60/143 (41%), Gaps = 1/143 (0%)
Frame = +1
Query: 343 SFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXX 522
S +P G + L ++F FFGHP VY L+ P + +++ + ++
Sbjct: 242 STVNPNFGINVGLADNMFWFFGHPIVYQLLFPAVAAL-YLLFELGSNRDWLGYTVTGAIW 300
Query: 523 XXXXXXXFIV*AHHIFTVGID-IDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNP 699
+V HH++ + + +T+ I++ + + +F LA + + I P
Sbjct: 301 VLATVTNLLVWVHHLYLYPFEPLPVNLMSQLSTMGISIVSAVSVFALLAMMWRSGIKMTP 360
Query: 700 NIL*RLGFVFLFTVGGLTGVIXA 768
+ L +F + G +GV A
Sbjct: 361 PYMFSLIAMFAWLEAGYSGVAQA 383
>UniRef50_Q8ZXC1 Cluster: Cytochrome C oxidase subunit I; n=3;
Pyrobaculum|Rep: Cytochrome C oxidase subunit I -
Pyrobaculum aerophilum
Length = 557
Score = 38.3 bits (85), Expect = 0.21
Identities = 29/102 (28%), Positives = 43/102 (42%), Gaps = 1/102 (0%)
Frame = +1
Query: 370 DPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFI 549
D + ++ F FFGHP VY ++P I I+ + G E F
Sbjct: 206 DVLEWRLWFWFFGHPLVYFWLVPAVTIWYTILPRVLG-TEVFSKTAAKAAFMLYLIASVP 264
Query: 550 V*AHHIFT-VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI 672
V HH F G+ + T T ++AVP+ I F +AT+
Sbjct: 265 VGLHHQFVDPGVHPVYKYLHTVLTYLVAVPSFITAFNVIATL 306
>UniRef50_Q9YBH5 Cluster: Cytochrome c oxidase (Ba3-type) subunit I;
n=1; Aeropyrum pernix|Rep: Cytochrome c oxidase
(Ba3-type) subunit I - Aeropyrum pernix
Length = 548
Score = 37.5 bits (83), Expect = 0.36
Identities = 29/102 (28%), Positives = 42/102 (41%), Gaps = 1/102 (0%)
Frame = +1
Query: 370 DPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFI 549
D +L + LF +FGHP VY +LP + + I + G F
Sbjct: 207 DVLLARTLFWWFGHPLVYFWLLPAVALWYYAIPRILG-VPLFSETMAKVAYILYMIASTP 265
Query: 550 V*AHHIFT-VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI 672
V HH F GI + T T ++A P+ + F LAT+
Sbjct: 266 VGLHHQFVDPGIGPFFKLVHTLVTFVVATPSMLTAFNILATL 307
>UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 592
Score = 36.3 bits (80), Expect = 0.84
Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 2/97 (2%)
Frame = +1
Query: 370 DPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKK-ETFXXXXXXXXXXXXXXXXF 546
+P+L + LF FFGHP VY +LP + + I+ + +K + +
Sbjct: 209 NPLLARTLFWFFGHPVVYFWLLPAYVALYTILPKIVSEKGKLYSDPAARLAFILFLIFSL 268
Query: 547 IV*AHHIFT-VGIDIDTRAYFTSATIIIAVPTGIKIF 654
V HH FT GI + T +A+P+ I F
Sbjct: 269 PVGLHHQFTDPGITNTWKLIHALFTFGVALPSMITAF 305
>UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4;
Chloroflexaceae|Rep: Cytochrome c oxidase, subunit I -
Roseiflexus sp. RS-1
Length = 561
Score = 35.5 bits (78), Expect = 1.5
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +1
Query: 364 GGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERG 480
G DP+L + LF F GHP VY +LP + + + Q+ G
Sbjct: 224 GTDPVLARTLFWFTGHPIVYFWLLPAYISWYNFVPQQAG 262
>UniRef50_Q2Y5N3 Cluster: Integral membrane proteins containing
uncharacterized repeats-like precursor; n=3;
Nitrosospira multiformis ATCC 25196|Rep: Integral
membrane proteins containing uncharacterized
repeats-like precursor - Nitrosospira multiformis
(strain ATCC 25196 / NCIMB 11849)
Length = 433
Score = 34.7 bits (76), Expect = 2.6
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +1
Query: 412 PEVYILILPGFGIISHIISQERGKK 486
PE+Y LILPG G++ I Q++ KK
Sbjct: 407 PEIYALILPGLGLVGFIARQKKAKK 431
>UniRef50_Q48874 Cluster: SakB; n=2; Lactobacillus sakei|Rep: SakB -
Lactobacillus sakei
Length = 430
Score = 33.1 bits (72), Expect = 7.8
Identities = 22/67 (32%), Positives = 35/67 (52%)
Frame = +3
Query: 363 RRRPNFISTFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNWVIR 542
RRR FI+ F I + +LY + + + S YF K KK N +L N+L + + +
Sbjct: 35 RRRVLFIAVFFPITFLV-ALYSDISNVIPILSGYFILKEKKENDYLLLNDLLFCTFIIFG 93
Query: 543 IHCLSSS 563
+ LSS+
Sbjct: 94 CNVLSSN 100
>UniRef50_Q5CTJ9 Cluster: Cation-transporting ATPase; n=2;
Cryptosporidium|Rep: Cation-transporting ATPase -
Cryptosporidium parvum Iowa II
Length = 1434
Score = 33.1 bits (72), Expect = 7.8
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = +3
Query: 390 FILIFWT--S*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNWVIRIHCLSSS 563
+I+ FW+ S SLYFN + N + T KK N L + +C+ + + S +
Sbjct: 558 YIIPFWSTSSMSLYFNNAIKYLNSEHILTTNPKKLNQLLLVDTICFDKTGTLTVPTFSIN 617
Query: 564 YIH 572
+H
Sbjct: 618 NVH 620
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 33.1 bits (72), Expect = 7.8
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +1
Query: 109 GXSVDLAIFSLHLAGISS 162
G SVDLAIF LHLAG+SS
Sbjct: 122 GPSVDLAIFPLHLAGVSS 139
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 526,484,315
Number of Sequences: 1657284
Number of extensions: 8947714
Number of successful extensions: 20803
Number of sequences better than 10.0: 122
Number of HSP's better than 10.0 without gapping: 19073
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20529
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 64204279620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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