Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_E06
(697 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0125 - 21039767-21039791,21039876-21039922,21040220-210405... 201 4e-52
03_02_0934 - 12513810-12513834,12513918-12513970,12514212-125145... 201 4e-52
07_03_1639 + 28305801-28305958,28306240-28306249 33 0.22
12_02_1042 + 25638585-25638711,25639585-25639745,25639873-256400... 31 0.66
02_04_0038 - 19110520-19110574,19110684-19110811,19110912-191110... 31 0.66
03_02_0050 + 5272471-5274861 31 1.2
12_01_0222 - 1675077-1675289,1675476-1675553,1675943-1676002,167... 29 3.5
11_01_0221 - 1720952-1721164,1721351-1721428,1721836-1721895,172... 29 3.5
03_02_0596 + 9714022-9714065,9714799-9714868,9714978-9715883,971... 29 3.5
01_05_0450 + 22357006-22357323,22357365-22357713,22358175-22358416 29 4.7
04_03_0266 + 13648287-13649099,13649186-13649524 28 6.2
10_06_0028 - 9802362-9802475,9802919-9803090,9803167-9803208,980... 28 8.1
09_06_0281 + 22014394-22015534,22016041-22017056 28 8.1
02_03_0361 - 18125504-18126250,18126381-18126543,18126713-18126942 28 8.1
>03_05_0125 -
21039767-21039791,21039876-21039922,21040220-21040533,
21040613-21040735,21041599-21041710
Length = 206
Score = 201 bits (491), Expect = 4e-52
Identities = 90/145 (62%), Positives = 109/145 (75%)
Frame = +3
Query: 90 VMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKG 269
V++CGK KVWLDPNE+NEI+ NSRQNIRK++KDG +IKKP +HSR+R R+ EA++KG
Sbjct: 14 VLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIKKPQKIHSRSRARRAHEAKQKG 73
Query: 270 RHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFK 449
RH G+GKRRGT AR+P K LW AKKID+H+YH +YMK KGN+FK
Sbjct: 74 RHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYREAKKIDKHMYHDMYMKVKGNMFK 133
Query: 450 NKRVLMEYIHRKKAEKARTKMLSDQ 524
NKRVLME IH+ KAEKAR K LSDQ
Sbjct: 134 NKRVLMESIHKSKAEKAREKTLSDQ 158
>03_02_0934 -
12513810-12513834,12513918-12513970,12514212-12514525,
12514608-12514730,12515710-12515821
Length = 208
Score = 201 bits (491), Expect = 4e-52
Identities = 90/145 (62%), Positives = 109/145 (75%)
Frame = +3
Query: 90 VMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKG 269
V++CGK KVWLDPNE+NEI+ NSRQNIRK++KDG +IKKP +HSR+R R+ EA++KG
Sbjct: 14 VLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIKKPQKIHSRSRARRAHEAKQKG 73
Query: 270 RHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFK 449
RH G+GKRRGT AR+P K LW AKKID+H+YH +YMK KGN+FK
Sbjct: 74 RHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYREAKKIDKHMYHDMYMKVKGNMFK 133
Query: 450 NKRVLMEYIHRKKAEKARTKMLSDQ 524
NKRVLME IH+ KAEKAR K LSDQ
Sbjct: 134 NKRVLMESIHKSKAEKAREKTLSDQ 158
>07_03_1639 + 28305801-28305958,28306240-28306249
Length = 55
Score = 33.1 bits (72), Expect = 0.22
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +3
Query: 423 MKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 524
MK KGN+ NKR + +AEKAR + LSDQ
Sbjct: 1 MKVKGNMLNNKRGPYGEYPQVQAEKARKRTLSDQ 34
>12_02_1042 +
25638585-25638711,25639585-25639745,25639873-25640064,
25640221-25640315,25640645-25640807,25640905-25641015,
25641611-25642741,25642813-25642965,25643060-25643159,
25643333-25643427,25643508-25643681,25643751-25643807,
25643887-25643958,25644151-25644249,25644320-25644451,
25644549-25644722,25644830-25644957,25645065-25645119
Length = 1072
Score = 31.5 bits (68), Expect = 0.66
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Frame = +3
Query: 105 KKKVWLDPNEINEIANTNSRQNIRKMI---KDGLVIKKPVAVHSRARVRKNTEARRKGRH 275
K W D E+N + + R + KM+ D LV+ +A H + T RKGR
Sbjct: 761 KGNPWDDDFELNTLLQESIRNSADKMLLTAPDSLVVS--LAKHDTRNDEETTSISRKGRA 818
Query: 276 CGFG 287
GFG
Sbjct: 819 QGFG 822
>02_04_0038 -
19110520-19110574,19110684-19110811,19110912-19111085,
19111189-19111320,19111391-19111489,19111680-19111751,
19111831-19111887,19111957-19112130,19112211-19112305,
19112478-19112577,19112672-19112824,19112896-19114026,
19114621-19114731,19114829-19114991,19115364-19115458,
19115613-19115804,19115929-19116069
Length = 1023
Score = 31.5 bits (68), Expect = 0.66
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Frame = +3
Query: 105 KKKVWLDPNEINEIANTNSRQNIRKMI---KDGLVIKKPVAVHSRARVRKNTEARRKGRH 275
K W D E+N + + R + KM+ D LV+ +A H + T RKGR
Sbjct: 712 KGNPWDDDFELNTLLQESIRNSADKMLLTAPDSLVVS--LAKHDTRNDEETTSISRKGRA 769
Query: 276 CGFG 287
GFG
Sbjct: 770 QGFG 773
>03_02_0050 + 5272471-5274861
Length = 796
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = -3
Query: 596 LLLGGNTFLAALACLLHFIAAGLSLVAKHLRPGLLSLLPVDVL-HEHTLVLEHI 438
LLL L+ +CL + L +HL P LLS +P+D L H H +L H+
Sbjct: 79 LLLAYRRHLSPPSCLPSLVPLLPVLPYRHLLPLLLSFVPLDPLRHLHRHLLAHL 132
>12_01_0222 -
1675077-1675289,1675476-1675553,1675943-1676002,
1676103-1676206,1676321-1676479,1676768-1676894,
1677569-1677736,1677890-1678000,1678090-1678243,
1678409-1678744,1678854-1679038,1679141-1679239,
1679376-1679639,1679776-1679952,1680351-1680644,
1680753-1680920,1681574-1681918,1682002-1682171,
1682272-1682422,1683296-1683365,1683456-1683640,
1683999-1684092,1684195-1684313,1684658-1684717,
1684844-1684930,1685631-1685717,1685905-1686013,
1686105-1686183,1686350-1686437,1686611-1686675,
1687570-1687722,1688514-1688620,1688702-1688784,
1688926-1689016,1689095-1689231,1689612-1689701,
1689795-1689962,1690366-1690560
Length = 1809
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -1
Query: 106 LPHRITEAASXFCSLRELILTR*DPTHTRKKHRP 5
LP+ IT AS S+R+L++ + R KHRP
Sbjct: 48 LPYAITSLASPAASVRKLVMEILSHINKRVKHRP 81
>11_01_0221 -
1720952-1721164,1721351-1721428,1721836-1721895,
1721996-1722099,1722214-1722372,1722668-1722794,
1723469-1723636,1723789-1723899,1723989-1724142,
1724308-1724643,1724753-1724937,1725040-1725138,
1725275-1725538,1725674-1725850,1726249-1726542,
1726649-1726816,1727473-1727817,1727901-1728070,
1728171-1728321,1729193-1729262,1729353-1729537,
1729896-1729989,1730094-1730212,1730558-1730617,
1730744-1730830,1732348-1732434,1732622-1732730,
1732822-1732900,1733067-1733154,1733328-1733392,
1734287-1734439,1735231-1735337,1735419-1735501,
1735643-1735733,1735812-1735948,1736118-1736207,
1736301-1736468,1736875-1737057
Length = 1805
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -1
Query: 106 LPHRITEAASXFCSLRELILTR*DPTHTRKKHRP 5
LP+ IT AS S+R+L++ + R KHRP
Sbjct: 44 LPYAITSLASATASVRKLVMEILSHINKRVKHRP 77
>03_02_0596 +
9714022-9714065,9714799-9714868,9714978-9715883,
9715973-9716146,9716260-9716373,9716975-9717033,
9717170-9717236,9717305-9717356,9718070-9718488,
9718786-9718847,9719305-9719374,9719730-9719831,
9719933-9720063,9720492-9720606,9720792-9720827
Length = 806
Score = 29.1 bits (62), Expect = 3.5
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +3
Query: 135 INEIANTNSRQNIRKMIKDGLVIK-KPVAVHSRARVRKNTEARRKGRHCGFGKRRGTAN 308
+ E N NS + + GL+ + KP+ V S RVR + K GK R TAN
Sbjct: 198 LGEANNDNSEKLEELFLDKGLLDELKPIRVESGKRVRASIRIIEKMMSSRVGKIRNTAN 256
>01_05_0450 + 22357006-22357323,22357365-22357713,22358175-22358416
Length = 302
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +3
Query: 192 GLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTA 305
G+ +K+ H + + R+GRH G+G+RR +A
Sbjct: 212 GITLKEDEKQHGTSSSAADGGGLRRGRHDGWGRRRSSA 249
>04_03_0266 + 13648287-13649099,13649186-13649524
Length = 383
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +3
Query: 105 KKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNT 251
K+K+ L +E ++ T R+ RK+ K + KK + H ++RK++
Sbjct: 320 KRKLVLSDDEGDDAEKTRDRETTRKLPKQA-IPKKKTSSHPMPKIRKSS 367
>10_06_0028 -
9802362-9802475,9802919-9803090,9803167-9803208,
9803344-9804011,9804098-9804418,9804495-9804833,
9804856-9805109,9805300-9805510
Length = 706
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +3
Query: 120 LDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVH 224
LDP +NE N R NI IKD L ++ +H
Sbjct: 628 LDPAVVNETTLKNDRANIVDYIKDCLFARQRQGLH 662
>09_06_0281 + 22014394-22015534,22016041-22017056
Length = 718
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -3
Query: 221 YCYRFLDDETILDHLTDVLSGVGVCDLID 135
Y YR DDE+++ H T +L+ + D++D
Sbjct: 657 YSYRSPDDESLVTHFTALLTQGNLGDILD 685
>02_03_0361 - 18125504-18126250,18126381-18126543,18126713-18126942
Length = 379
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = +3
Query: 186 KDGLVIKKPVAVHSRARVRKNTEARRKGRHC---GFGKRRGTANAR 314
KDG ++ + +RA R +T+A R+ HC G+G RR + R
Sbjct: 174 KDGRNLQAGAQLCARAASRGHTDALRELGHCVSDGYGVRRSLSGGR 219
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,412,500
Number of Sequences: 37544
Number of extensions: 379826
Number of successful extensions: 1051
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1023
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1049
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1780264028
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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