Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_E02
(703 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36) 136 1e-32
SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38) 107 7e-24
SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.) 91 1e-18
SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.) 91 1e-18
SB_39934| Best HMM Match : RRM_1 (HMM E-Value=6.5e-24) 81 9e-16
SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16) 81 1e-15
SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.) 80 2e-15
SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0) 73 2e-13
SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0) 68 6e-12
SB_28139| Best HMM Match : RRM_1 (HMM E-Value=3.7e-28) 62 6e-10
SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0) 58 9e-09
SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0) 56 4e-08
SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0) 56 4e-08
SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18) 54 1e-07
SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24) 53 3e-07
SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42) 51 1e-06
SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18) 51 1e-06
SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0) 49 4e-06
SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20) 48 1e-05
SB_31413| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 1e-05
SB_6474| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_37827| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 2e-05
SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0) 46 2e-05
SB_35971| Best HMM Match : RRM_1 (HMM E-Value=0.013) 46 4e-05
SB_971| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 5e-05
SB_29577| Best HMM Match : RRM_1 (HMM E-Value=8.5e-15) 45 7e-05
SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 9e-05
SB_877| Best HMM Match : RRM_1 (HMM E-Value=1e-15) 44 9e-05
SB_57661| Best HMM Match : RRM_1 (HMM E-Value=0.017) 36 1e-04
SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0) 44 1e-04
SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-04
SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25) 43 2e-04
SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33) 42 6e-04
SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18) 42 6e-04
SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_13046| Best HMM Match : La (HMM E-Value=5e-23) 42 6e-04
SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 8e-04
SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39) 40 0.003
SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_29377| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.005
SB_47831| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.005
SB_34062| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.005
SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07) 38 0.010
SB_1157| Best HMM Match : RRM_1 (HMM E-Value=1.2e-11) 38 0.010
SB_52510| Best HMM Match : RRM_1 (HMM E-Value=8.1e-21) 37 0.014
SB_46435| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.018
SB_35697| Best HMM Match : RRM_1 (HMM E-Value=1.3e-19) 36 0.032
SB_18026| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.042
SB_27005| Best HMM Match : NTF2 (HMM E-Value=1.1e-33) 35 0.073
SB_57434| Best HMM Match : LRR_1 (HMM E-Value=3.9e-13) 34 0.097
SB_11300| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.097
SB_47990| Best HMM Match : RRM_1 (HMM E-Value=7.8e-28) 34 0.13
SB_20581| Best HMM Match : RRM_1 (HMM E-Value=1.7e-07) 33 0.17
SB_56343| Best HMM Match : RRM_1 (HMM E-Value=3.2e-14) 33 0.22
SB_11682| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_47564| Best HMM Match : RRM_1 (HMM E-Value=0.23) 33 0.22
SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23) 32 0.39
SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35) 31 0.90
SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.90
SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.90
SB_11425| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_28070| Best HMM Match : RRM_1 (HMM E-Value=1.3e-07) 31 1.2
SB_19711| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_1073| Best HMM Match : Ribosomal_L12 (HMM E-Value=2.2) 30 2.1
SB_37378| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_12089| Best HMM Match : RRM_1 (HMM E-Value=7.4e-13) 29 2.8
SB_8368| Best HMM Match : VWA (HMM E-Value=0) 29 2.8
SB_28750| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_15012| Best HMM Match : zf-CCHC (HMM E-Value=1.1e-05) 29 3.6
SB_51896| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_52029| Best HMM Match : RRM_1 (HMM E-Value=1e-18) 29 4.8
SB_39378| Best HMM Match : VWA (HMM E-Value=0) 29 4.8
SB_50597| Best HMM Match : 7tm_1 (HMM E-Value=2.59941e-42) 28 6.4
SB_44482| Best HMM Match : RRM_1 (HMM E-Value=0.19) 28 6.4
SB_1422| Best HMM Match : Synaphin (HMM E-Value=7.3) 28 6.4
SB_42035| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_14704| Best HMM Match : Mak16 (HMM E-Value=9.3) 28 6.4
SB_56987| Best HMM Match : Cornifin (HMM E-Value=1.5) 28 8.4
SB_41149| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_41060| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_34393| Best HMM Match : RVT_1 (HMM E-Value=2e-36) 28 8.4
SB_46941| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_7529| Best HMM Match : Toxin_29 (HMM E-Value=0.0017) 28 8.4
SB_2941| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
>SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36)
Length = 328
Score = 136 bits (330), Expect = 1e-32
Identities = 72/177 (40%), Positives = 102/177 (57%), Gaps = 1/177 (0%)
Frame = +2
Query: 173 GDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRG 352
G S D N DD KLFVGGLS+ETT + L+++F YGE+ +++K D TGR RG
Sbjct: 12 GTSLDSNKTRMTKDDDIGKLFVGGLSYETTKESLKEYFSKYGELVGVDIKMDALTGRPRG 71
Query: 353 FAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSE 532
FAF+ FK D + I K R KIFVGGL E SD++IR +F +
Sbjct: 72 FAFVQFKHQSEADAIDPKPAAPIG------KPPHLRVKKIFVGGLKPETSDEKIREYFGK 125
Query: 533 -FGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVXRATPK 700
+ + E+E + + N+R+GFCF++F+SE V+ + +T I G +V+V RA PK
Sbjct: 126 AYAPVKEIEYITEHSSNRRRGFCFVSFDSEDTVDKICETQFHNIEGNKVEVKRALPK 182
>SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38)
Length = 496
Score = 107 bits (258), Expect = 7e-24
Identities = 54/178 (30%), Positives = 111/178 (62%), Gaps = 19/178 (10%)
Frame = +2
Query: 224 RKLFVGGLSWETTDKELRDHFGAYGEI-ESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 400
RK+F+GGL+W TT++ L+D+F +G I + + +K D GRSRGF F+ +++ +S+++V+
Sbjct: 50 RKIFIGGLNWNTTEEGLKDYFSQWGTIVDCVIMKRD---GRSRGFGFVTYESSDSVNEVL 106
Query: 401 AAGEHTINNKKVDPKK-----------AKARHGKIFVGGLSSEISDDEIRNFFSE----- 532
+H +++++++PK+ A ++ KIFVGGL+S +++I+ +F+
Sbjct: 107 KKKDHVLDDREIEPKRSVPRDESGAPEAMSKTRKIFVGGLASTTVEEDIKEYFNSLCRKN 166
Query: 533 -FGTILEVEMPFDKTKNQR-KGFCFITFESEQVVNDLLKTPKRTIGGKEVDVXRATPK 700
G +++V++ D+ +R +GF F+TF+++++V + I K+ +V +A P+
Sbjct: 167 GMGEVIDVDLKRDRDNPKRIRGFAFVTFDNDEIVEKVCAMKYHEIRMKQCEVKKAEPQ 224
>SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 90.6 bits (215), Expect = 1e-18
Identities = 62/188 (32%), Positives = 98/188 (52%), Gaps = 18/188 (9%)
Frame = +2
Query: 191 NSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 370
N E D KLFVGGL+ ETT++ LR++F AYGE+ + V D T +SRGF ++ F
Sbjct: 3 NRQENTNNDPRAKLFVGGLNRETTNETLREYFEAYGELTDVVVICDSATKKSRGFGYVTF 62
Query: 371 ---KAPESI--DKVMAAGEHTINNKKVDPKKAKARHG----------KIFVGGLSSEISD 505
K ++ DKV G H I+ K+V+ K+A R KIFVGGL + +
Sbjct: 63 ADYKVTRNVLKDKV-ENGAHRIDGKEVEVKRAIPRDDNSATSHEKTKKIFVGGLPEDATK 121
Query: 506 DEIRNFFSEF--GTILEVEMPFDK-TKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEV 676
++I+ + +V++ K + + +GF F+ +E ++L K + GK V
Sbjct: 122 EDIQEAIESLLEEKVDKVDLIMKKEDETKHRGFAFVELNNEDQADELCCVKKIHVKGKMV 181
Query: 677 DVXRATPK 700
+ +ATP+
Sbjct: 182 EAKKATPR 189
>SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 90.6 bits (215), Expect = 1e-18
Identities = 57/180 (31%), Positives = 102/180 (56%), Gaps = 21/180 (11%)
Frame = +2
Query: 215 DDDR--KLFVGGLSWETTDKELRDHF-----GAYGEIESINVKTDPNTGRSRGFAFIVFK 373
DD + KLFVGGL+ +TT++ +R +F G+ ++ S+++ P G+SR F F+ F
Sbjct: 3 DDSKLMKLFVGGLNEDTTEETVRAYFKSFCEGSEADVSSVSLAKTPE-GKSRKFCFVEFS 61
Query: 374 -APESIDKVMAAGE-HTINNKKVDPKKAKARHG----------KIFVGGLSSEISDDEIR 517
+ ID ++ E H+I+NK+V+ K+A R K+F+GGL E S+++++
Sbjct: 62 NGSDIIDNIVFNFESHSIDNKQVEVKRAMPRDDPNELAHVRTKKLFIGGLKDEHSEEDVK 121
Query: 518 NFFSEFGTI--LEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVXRA 691
+ LE++M D+ N+ KG+CF+ F +E +V+ L + GK+V++ +A
Sbjct: 122 TALAPLSPFAPLEIKMVRDRETNKFKGYCFVNFPNEHIVDKLYLVRHIQVKGKDVEMKKA 181
>SB_39934| Best HMM Match : RRM_1 (HMM E-Value=6.5e-24)
Length = 343
Score = 81.0 bits (191), Expect = 9e-16
Identities = 45/153 (29%), Positives = 81/153 (52%), Gaps = 2/153 (1%)
Frame = +2
Query: 224 RKLFVGGLSWETTDKELRDHFGAYGE-IESIN-VKTDPNTGRSRGFAFIVFKAPESIDKV 397
R +FVG L T + + ++F GE +E + ++T +G+S+GFAF+ + E+++ V
Sbjct: 42 RTIFVGSLHPSTVESTIFEYFSTLGEQVEHVKCIRT--LSGKSKGFAFVRLRKKEAVESV 99
Query: 398 MAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTK 577
+ +H I+N V +K + K+ + + S I + +I FS G I V +P +
Sbjct: 100 LGRDDHVIDNSDVSMEKQDT-YRKVILKNIPSSIGESQILEHFSSSGEIASVYIPENLKT 158
Query: 578 NQRKGFCFITFESEQVVNDLLKTPKRTIGGKEV 676
+RKG C +TF S +++K K I G ++
Sbjct: 159 KERKGHCIVTFASVTEAFEVVKKRKHHIHGYDI 191
Score = 53.2 bits (122), Expect = 2e-07
Identities = 32/174 (18%), Positives = 81/174 (46%), Gaps = 2/174 (1%)
Frame = +2
Query: 185 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFI 364
D++ +D RK+ + + + ++ +HF + GEI S+ + + T +G +
Sbjct: 108 DNSDVSMEKQDTYRKVILKNIPSSIGESQILEHFSSSGEIASVYIPENLKTKERKGHCIV 167
Query: 365 VFKAPESIDKVMAAGEHTINNKKV--DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFG 538
F + +V+ +H I+ + + + K+ + L ++ D+I+N FG
Sbjct: 168 TFASVTEAFEVVKKRKHHIHGYDIITEYYMNLKQPKKLCLKNLPYNVTVDQIKNRMDGFG 227
Query: 539 TILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVXRATPK 700
++E+++ +++ + F+ F +E + +++K K + G V+ + + K
Sbjct: 228 GLMEIDLAVMPDRSECE--AFLIFSNEDSIREIMKQGKISFGDSLVNTEQVSAK 279
Score = 32.7 bits (71), Expect = 0.30
Identities = 18/73 (24%), Positives = 29/73 (39%)
Frame = +2
Query: 470 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTP 649
IFVG L + I +FS G +E + KGF F+ ++ V +L
Sbjct: 44 IFVGSLHPSTVESTIFEYFSTLGEQVEHVKCIRTLSGKSKGFAFVRLRKKEAVESVLGRD 103
Query: 650 KRTIGGKEVDVXR 688
I +V + +
Sbjct: 104 DHVIDNSDVSMEK 116
>SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16)
Length = 842
Score = 80.6 bits (190), Expect = 1e-15
Identities = 43/130 (33%), Positives = 71/130 (54%), Gaps = 1/130 (0%)
Frame = +2
Query: 272 LRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA 451
LR HF +GE++ V DP T RSRGF F+ FK P+++D V+ +G +++D KK
Sbjct: 124 LRQHFEKFGELKECVVMRDPVTKRSRGFGFLTFKDPKAVDVVLNSGA-----QELDGKKM 178
Query: 452 KARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF-ITFESEQVV 628
KIF+GGLS+ S+++++ +FS+FG + E + K++ + +
Sbjct: 179 VTTTKKIFIGGLSTNTSEEDMKKYFSQFGKV-SCEYETEDVKDELAAVLISVHSNGTHIT 237
Query: 629 NDLLKTPKRT 658
N TP +T
Sbjct: 238 NQTPSTPNQT 247
Score = 36.3 bits (80), Expect = 0.024
Identities = 16/62 (25%), Positives = 35/62 (56%)
Frame = +2
Query: 491 SEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGK 670
++ S + +R F +FG + E + D + +GF F+TF+ + V+ +L + + + GK
Sbjct: 117 TQASAEGLRQHFEKFGELKECVVMRDPVTKRSRGFGFLTFKDPKAVDVVLNSGAQELDGK 176
Query: 671 EV 676
++
Sbjct: 177 KM 178
Score = 32.3 bits (70), Expect = 0.39
Identities = 9/27 (33%), Positives = 22/27 (81%)
Frame = +2
Query: 224 RKLFVGGLSWETTDKELRDHFGAYGEI 304
+K+F+GGLS T++++++ +F +G++
Sbjct: 183 KKIFIGGLSTNTSEEDMKKYFSQFGKV 209
>SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 79.8 bits (188), Expect = 2e-15
Identities = 46/134 (34%), Positives = 72/134 (53%), Gaps = 5/134 (3%)
Frame = +2
Query: 230 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAG 409
L V GL + TT+ E++++F +GEI+ VK DPNT RSRGF F+ FK E V++
Sbjct: 117 LIVLGLPYATTESEMKEYFTRFGEIDFCEVKLDPNTRRSRGFGFVRFKKDEDAKNVLST- 175
Query: 410 EHTINNKKVD-----PKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKT 574
H I + + PK+ K+FVG L ++ + +F++FG + +V +P
Sbjct: 176 SHRIQGRLCEVRLPRPKEELNVPKKLFVGRLPESTTEKTLMEYFAQFGEVTDVYIP---- 231
Query: 575 KNQRKGFCFITFES 616
+ F F+TF S
Sbjct: 232 -KPFRHFGFVTFAS 244
Score = 43.6 bits (98), Expect = 2e-04
Identities = 23/79 (29%), Positives = 41/79 (51%)
Frame = +2
Query: 464 GKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 643
G + V GL ++ E++ +F+ FG I E+ D + +GF F+ F+ ++ ++L
Sbjct: 115 GDLIVLGLPYATTESEMKEYFTRFGEIDFCEVKLDPNTRRSRGFGFVRFKKDEDAKNVLS 174
Query: 644 TPKRTIGGKEVDVXRATPK 700
T R I G+ +V PK
Sbjct: 175 TSHR-IQGRLCEVRLPRPK 192
Score = 33.9 bits (74), Expect = 0.13
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +2
Query: 224 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGF 355
+KLFVG L TT+K L ++F +GE+ + + P R GF
Sbjct: 199 KKLFVGRLPESTTEKTLMEYFAQFGEVTDVYI---PKPFRHFGF 239
>SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 420
Score = 73.3 bits (172), Expect = 2e-13
Identities = 40/113 (35%), Positives = 64/113 (56%)
Frame = +2
Query: 218 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 397
+ R +FVGGL+ T ++ L+D+F +GE+ES+ + G SR + F++FK + K
Sbjct: 78 NSRSVFVGGLASGTDEEGLKDYFEQFGEVESVRIMR-TFLGYSRNYGFVLFK-DDGPSKE 135
Query: 398 MAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVE 556
+ H IN K VD K++ I+VGGL S ++ +R F +FG I V+
Sbjct: 136 VLKKSHVINGKTVDVGKSR-NFRVIYVGGLPSHFTEQTVREHFKKFGVIEAVK 187
Score = 52.0 bits (119), Expect = 5e-07
Identities = 21/72 (29%), Positives = 42/72 (58%)
Frame = +2
Query: 221 DRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 400
+R LFV LS +T + ++ +F YG++ +++ TD TG+S+G + + P +++K++
Sbjct: 318 ERTLFVDNLSEDTKELDVLRYFRPYGQVAKVHILTDRETGKSKGCGVVKLRHPGTVNKIL 377
Query: 401 AAGEHTINNKKV 436
H I +V
Sbjct: 378 EEPVHVIGKSQV 389
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/90 (25%), Positives = 45/90 (50%)
Frame = +2
Query: 422 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 601
N+ PK + +FVGGL+S ++ ++++F +FG + V + + + F
Sbjct: 66 NSTLPSPKDIEKNSRSVFVGGLASGTDEEGLKDYFEQFGEVESVRI-MRTFLGYSRNYGF 124
Query: 602 ITFESEQVVNDLLKTPKRTIGGKEVDVXRA 691
+ F+ + ++LK I GK VDV ++
Sbjct: 125 VLFKDDGPSKEVLK-KSHVINGKTVDVGKS 153
Score = 40.7 bits (91), Expect = 0.001
Identities = 25/118 (21%), Positives = 52/118 (44%)
Frame = +2
Query: 224 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 403
R ++VGGL T++ +R+HF +G IE++ + + G G + E + +
Sbjct: 157 RVIYVGGLPSHFTEQTVREHFKKFGVIEAVKFIENTSVGAKTGXXXXE-EDQEILGCPVT 215
Query: 404 AGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTK 577
+ D + K+ V L + + DE+R +F + G + +++ + K
Sbjct: 216 VRARSGKESNEDLMAKVIQSKKLMVQDLDFDTTVDELREYFEKCGELTGIDLLINSEK 273
>SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 593
Score = 68.1 bits (159), Expect = 6e-12
Identities = 40/177 (22%), Positives = 90/177 (50%), Gaps = 18/177 (10%)
Frame = +2
Query: 227 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES------- 385
+++VG +++E ++ +R F +G I I++ DP + +GFAF+ + PE+
Sbjct: 103 RVYVGSINFELREEHIRTAFHPFGPINKIDLSWDPLNMKHKGFAFVEYDLPEAAQLALEQ 162
Query: 386 IDKVMAAGEHT-----INNKKVDP-----KKAKARHGKIFVGGLSSEISDDEIRNFFSEF 535
++ V+ G + N + P ++ ++ +I++ + ++ +D+I++ F F
Sbjct: 163 MNGVLLGGRNIKVGRPSNVPQAAPLIEQFEQEAKKYARIYIASVHPDLLEDDIKSVFEAF 222
Query: 536 GTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKR-TIGGKEVDVXRATPKP 703
G ++ + + + KG+ FI +E++Q ND + + +GG+ + V RA P
Sbjct: 223 GKVVHCSLSKEPMTGKHKGYGFIEYENQQSANDAIASMNLFDLGGQFLRVGRAITPP 279
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/88 (25%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Frame = +2
Query: 443 KKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 622
++A A +++VG ++ E+ ++ IR F FG I ++++ +D + KGF F+ ++ +
Sbjct: 95 QRALALMCRVYVGSINFELREEHIRTAFHPFGPINKIDLSWDPLNMKHKGFAFVEYDLPE 154
Query: 623 VVNDLLKTPKRT-IGGKEVDVXRATPKP 703
L+ +GG+ + V R + P
Sbjct: 155 AAQLALEQMNGVLLGGRNIKVGRPSNVP 182
>SB_28139| Best HMM Match : RRM_1 (HMM E-Value=3.7e-28)
Length = 419
Score = 61.7 bits (143), Expect = 6e-10
Identities = 48/185 (25%), Positives = 78/185 (42%), Gaps = 7/185 (3%)
Frame = +2
Query: 110 DNFAQXITTDNQLNGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFG 289
D A +T+ ++ D D + L++ GL TTD +L
Sbjct: 62 DKKAYSVTSSQSPGLSSGRSSSDRMDSLPDTGEEKLSKTNLYIRGLKANTTDDDLVRLCH 121
Query: 290 AYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH-- 463
YG I S D +T +G+ F+ F++P S K +AA + NK + + AK +
Sbjct: 122 KYGTIISTKAILDKDTNLCKGYGFVDFESPISAQKAVAA----LVNKGIQAQMAKQQEQD 177
Query: 464 -GKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES----EQVV 628
+++ L + + N FS++G ++ + DK N KG F ES EQV+
Sbjct: 178 PTNLYIQNLPQNCDEAMLENMFSKYGKVISTRILRDKDTNS-KGVGFARMESAEKCEQVI 236
Query: 629 NDLLK 643
D K
Sbjct: 237 KDFNK 241
>SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 59.7 bits (138), Expect = 2e-09
Identities = 39/174 (22%), Positives = 82/174 (47%), Gaps = 10/174 (5%)
Frame = +2
Query: 146 LNGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKT 325
++ N++ D +H E D+ L + + + ++++ FG G + S +
Sbjct: 1 MDDNSKAMAEDINNHEPMENGTSDERTNLIINYVPPSMSQEDIKKIFGTVGNVTSCKLIR 60
Query: 326 DPNTGRSRGFAFIVFKAPESIDK-VMAAGEHTINNK--KVD---PKKAKARHGKIFVGGL 487
D TG+S G+AF+ + P+ +K V + NK KV P + ++ +++ GL
Sbjct: 61 DRATGQSLGYAFVNYDNPDDANKAVREMNGARLQNKTLKVSFARPSSTEIKNANLYISGL 120
Query: 488 SSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF----ESEQVVNDL 637
++ ++E+ F FG I+ ++ D + +G F+ F E++ ++DL
Sbjct: 121 PKDMKEEEVEALFKPFGKIITSKVLKD-VSGEGRGTGFVRFDKRCEAQTAIDDL 173
>SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 382
Score = 57.6 bits (133), Expect = 9e-09
Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 8/143 (5%)
Frame = +2
Query: 212 RDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID 391
R+ D ++VGGL + ++ + + F G + ++++ D T +G+ F+ F E D
Sbjct: 9 RNQDATIYVGGLDEKVSEALIWELFLQSGPVVNVHMPKDRITQLHQGYGFVEFLGEEDAD 68
Query: 392 -KVMAAGEHTINNKKVDPKKAKARH------GKIFVGGLSSEISDDEIRNFFSEFGTILE 550
+ + K + KA A + +F+G L +E+ + + + FS FG IL+
Sbjct: 69 YAIKVMNMIKVYGKPIRVNKASAHNKNLDVGANLFIGNLDTEVDEKLLYDTFSAFGVILQ 128
Query: 551 V-EMPFDKTKNQRKGFCFITFES 616
++ D KGF FI F S
Sbjct: 129 TPKIMRDSDTGNSKGFAFINFAS 151
Score = 48.0 bits (109), Expect = 7e-06
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Frame = +2
Query: 194 SAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEI-ESINVKTDPNTGRSRGFAFIVF 370
SA D LF+G L E +K L D F A+G I ++ + D +TG S+GFAFI F
Sbjct: 90 SAHNKNLDVGANLFIGNLDTEVDEKLLYDTFSAFGVILQTPKIMRDSDTGNSKGFAFINF 149
Query: 371 KAPESIDKVMAA--GEHTIN 424
+ ++ D + A G++ N
Sbjct: 150 ASFDASDAAIEAMNGQYLCN 169
Score = 42.7 bits (96), Expect = 3e-04
Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Frame = +2
Query: 440 PKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 619
P + + I+VGGL ++S+ I F + G ++ V MP D+ +G+ F+ F E
Sbjct: 5 PIAERNQDATIYVGGLDEKVSEALIWELFLQSGPVVNVHMPKDRITQLHQGYGFVEFLGE 64
Query: 620 QVVNDLLKTPKR-TIGGKEVDVXRAT 694
+ + +K + GK + V +A+
Sbjct: 65 EDADYAIKVMNMIKVYGKPIRVNKAS 90
>SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 514
Score = 55.6 bits (128), Expect = 4e-08
Identities = 35/157 (22%), Positives = 73/157 (46%), Gaps = 16/157 (10%)
Frame = +2
Query: 200 EAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAP 379
E+ D R +F L+ ++L + F G++ + + +D N+ RS+G A+I F
Sbjct: 138 ESAEEKDQRTVFCMQLARNIRPRDLEEFFSKVGQVSDVRIISDRNSRRSKGIAYIEFTDK 197
Query: 380 ESIDKVMA-AGEHTI-------------NNKKVDPKKAKARHG--KIFVGGLSSEISDDE 511
++ + +G+ + N + ++ K G +++VG L I++
Sbjct: 198 SAVPLAIGLSGQKLLGAPIMVMLTQAEKNRLAAEAERLKQPLGPTRLYVGSLHFNITEAM 257
Query: 512 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 622
++ F FGT+ V++ +D N+ KG+ F+ F +
Sbjct: 258 VKAVFEPFGTVDSVQLIYDSETNRSKGYGFVQFREAE 294
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/58 (29%), Positives = 34/58 (58%)
Frame = +2
Query: 227 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 400
+L+VG L + T+ ++ F +G ++S+ + D T RS+G+ F+ F+ E+ + M
Sbjct: 243 RLYVGSLHFNITEAMVKAVFEPFGTVDSVQLIYDSETNRSKGYGFVQFREAEAAKRAM 300
>SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 718
Score = 55.6 bits (128), Expect = 4e-08
Identities = 42/171 (24%), Positives = 84/171 (49%), Gaps = 17/171 (9%)
Frame = +2
Query: 230 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAP---ESIDKVM 400
L+VG L+ + T+ L + F G + SI V D T RS G+A++ F+ P +++ +
Sbjct: 15 LYVGDLAPDVTEAMLYEKFSTAGSVLSIRVCRDLVTRRSLGYAYVNFQQPGHDAALEAIA 74
Query: 401 AAGEHTINNKKV------DPKKAKARHG-------KIFVGGLSSEISDDEIRNFFSEFGT 541
+N+KKV K+ + G ++V ++ D++++ +E G
Sbjct: 75 RVDGMLLNDKKVFVGRWMSKKERIEKMGTQPKKFTNVYVKNFGDDMDDEQMKEICAEAGK 134
Query: 542 ILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPK-RTIGGKEVDVXRA 691
I+ +++ D + + KGF F++FE+ + + + + IGG+ + RA
Sbjct: 135 IVSLKVMTD-PEGKSKGFGFVSFETPEEAEEAVNVLNGKEIGGRRLWAGRA 184
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/57 (36%), Positives = 30/57 (52%)
Frame = +2
Query: 230 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 400
L++ L D+ LR+ F YG I S V D + G S+GF F+ F +PE K +
Sbjct: 214 LYIKNLDDPIDDERLREEFSPYGTISSAKVMKD-DKGNSKGFGFVCFSSPEEATKAV 269
>SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18)
Length = 291
Score = 53.6 bits (123), Expect = 1e-07
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Frame = +2
Query: 467 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 646
K+FVGG+ E DD +R FF++FG I E + D+ + KG+ F+T + K
Sbjct: 11 KLFVGGIPYESGDDALRKFFAQFGEIREAVVIKDRVTKKSKGYGFVTMATSDAAELACKN 70
Query: 647 PKRTIGGKEVDV----XRATPKP 703
+ I G++ +V A PKP
Sbjct: 71 KRPMIEGRQANVNLAYLGAKPKP 93
Score = 44.4 bits (100), Expect = 9e-05
Identities = 20/55 (36%), Positives = 31/55 (56%)
Frame = +2
Query: 227 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID 391
KLFVGG+ +E+ D LR F +GEI V D T +S+G+ F+ ++ +
Sbjct: 11 KLFVGGIPYESGDDALRKFFAQFGEIREAVVIKDRVTKKSKGYGFVTMATSDAAE 65
>SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24)
Length = 407
Score = 52.8 bits (121), Expect = 3e-07
Identities = 32/120 (26%), Positives = 60/120 (50%), Gaps = 5/120 (4%)
Frame = +2
Query: 359 FIVFKAPESIDKVMAAGEHTIN--NKKVD---PKKAKARHGKIFVGGLSSEISDDEIRNF 523
++V+KA E+ ++ +A+ I+ + +VD KA +F+G L +I ++ +R
Sbjct: 16 YVVYKAAENANQAIASNGEEIDGFHIRVDLASNDKAHDHQRSVFIGNLPFDIEEEPLREL 75
Query: 524 FSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVXRATPKP 703
F+ G + V + D+ KGF ++ FES+ V LK G+++ V + KP
Sbjct: 76 FTTCGNVESVRLIRDRKTGIGKGFGYVLFESKDAVVFALKMNNAEFKGRKIRVFPSKDKP 135
Score = 48.4 bits (110), Expect = 6e-06
Identities = 21/98 (21%), Positives = 48/98 (48%)
Frame = +2
Query: 215 DDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 394
D R +F+G L ++ ++ LR+ F G +ES+ + D TG +GF +++F++ +++
Sbjct: 53 DHQRSVFIGNLPFDIEEEPLRELFTTCGNVESVRLIRDRKTGIGKGFGYVLFESKDAVVF 112
Query: 395 VMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDD 508
+ +K+ +K + F+ + D+
Sbjct: 113 ALKMNNAEFKGRKIRVFPSKDKPQTEFISHIQVRFRDN 150
>SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42)
Length = 1531
Score = 50.8 bits (116), Expect = 1e-06
Identities = 34/132 (25%), Positives = 63/132 (47%), Gaps = 3/132 (2%)
Frame = +2
Query: 167 GGGDSQDHNSAEA-PGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGR 343
GGG +++ E PG R LFVG + TT +L++ F YGE+ +++K P
Sbjct: 231 GGGSISNYSEDEFDPGCT--RTLFVGNIEKTTTYGDLKEAFERYGEVIDVDIKKQPG--- 285
Query: 344 SRGFAFIVF-KAPESIDKVMAAGEHTINNKKVDPKKAKARH-GKIFVGGLSSEISDDEIR 517
+ +AF+ F + +I + +V K I+VGG+++ +S+ ++
Sbjct: 286 NNPYAFVQFAELSSAIQARRKMDREYVGRNRVKVGFGKVNPINTIWVGGVTNSLSEQQVE 345
Query: 518 NFFSEFGTILEV 553
F +G + +V
Sbjct: 346 RHFGRYGRVTKV 357
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +2
Query: 218 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINV--KTDPNTGRSRGFAFI 364
+ R L+VG L ++++ HF YG +ES+ + K GR+ F+
Sbjct: 4 ETRHLWVGNLPENIREEDIVKHFTRYGRVESVKILPKRSAEGGRASFVDFV 54
Score = 27.9 bits (59), Expect = 8.4
Identities = 9/35 (25%), Positives = 21/35 (60%)
Frame = +2
Query: 230 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPN 334
++VGG++ +++++ HFG YG + + + N
Sbjct: 330 IWVGGVTNSLSEQQVERHFGRYGRVTKVVINRVTN 364
>SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18)
Length = 268
Score = 50.8 bits (116), Expect = 1e-06
Identities = 24/57 (42%), Positives = 37/57 (64%)
Frame = +2
Query: 467 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDL 637
+IFV G + E ++ E+R FF E+G + E ++ DK KG+ FITFES++V + L
Sbjct: 9 RIFVKGFNRETTESELRAFFEEYGVVKESKIVRDK-HGVSKGYAFITFESQEVADGL 64
Score = 47.6 bits (108), Expect = 1e-05
Identities = 23/60 (38%), Positives = 37/60 (61%)
Frame = +2
Query: 212 RDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID 391
+D +++FV G + ETT+ ELR F YG ++ + D + G S+G+AFI F++ E D
Sbjct: 4 QDISKRIFVKGFNRETTESELRAFFEEYGVVKESKIVRDKH-GVSKGYAFITFESQEVAD 62
>SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 610
Score = 50.0 bits (114), Expect = 2e-06
Identities = 37/143 (25%), Positives = 66/143 (46%), Gaps = 8/143 (5%)
Frame = +2
Query: 227 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 406
++F+G + + + EL F G I + DP +G ++GFAF F + +
Sbjct: 153 QVFIGKVPRDCFEDELIPVFEECGHIYDFRLMIDPISGLTKGFAFCTFSNKDEAQNAV-- 210
Query: 407 GEHTINNKKVDPKK-----AKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE---VEMP 562
++NK++ P K + ++FVG + S EI FS+ L+ V +
Sbjct: 211 --KKLDNKEIRPGKRLGVCISVANSRLFVGSIPKTKSKQEILEEFSKVTNGLDDVIVYLS 268
Query: 563 FDKTKNQRKGFCFITFESEQVVN 631
D+ K + +GF F+ +ES Q +
Sbjct: 269 ADQ-KGKNRGFAFLEYESHQAAS 290
Score = 36.7 bits (81), Expect = 0.018
Identities = 16/59 (27%), Positives = 29/59 (49%)
Frame = +2
Query: 467 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 643
++F+G + + +DE+ F E G I + + D KGF F TF ++ + +K
Sbjct: 153 QVFIGKVPRDCFEDELIPVFEECGHIYDFRLMIDPISGLTKGFAFCTFSNKDEAQNAVK 211
>SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 291
Score = 49.2 bits (112), Expect = 3e-06
Identities = 20/62 (32%), Positives = 39/62 (62%)
Frame = +2
Query: 203 APGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 382
A G + RKL++G L++ + + E+ F +G +E +++ D +GRSRGF F++ ++ +
Sbjct: 2 ADGENRGRKLYIGNLNFNSDEGEIEQAFEEFG-VEKVDILRDKESGRSRGFGFVLLQSAD 60
Query: 383 SI 388
I
Sbjct: 61 QI 62
Score = 45.6 bits (103), Expect = 4e-05
Identities = 24/82 (29%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Frame = +2
Query: 458 RHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVND 634
R K+++G L+ + EI F EFG + +V++ DK + +GF F+ +S +Q+
Sbjct: 7 RGRKLYIGNLNFNSDEGEIEQAFEEFG-VEKVDILRDKESGRSRGFGFVLLQSADQIAPA 65
Query: 635 LLKTPKRTIGGKEVDVXRATPK 700
+ K + ++GG+ + V A K
Sbjct: 66 IEKMNQSSVGGRNITVALALDK 87
>SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 1026
Score = 48.8 bits (111), Expect = 4e-06
Identities = 25/104 (24%), Positives = 55/104 (52%), Gaps = 2/104 (1%)
Frame = +2
Query: 101 ANNDNFAQXITTDNQLNGNAENGGGDSQDHNSAEAPGRD--DDRKLFVGGLSWETTDKEL 274
+++D + ++ D+ N ++ D++S + D + +F+ LS+++T K +
Sbjct: 373 SDDDEDVKHMSKDDNNNEKSDEDDASEDDNHSQRSKPSDVKEGLTVFIRNLSFDSTQKNI 432
Query: 275 RDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 406
+ F +G+I V D T S+G AF+ +++ ES+ + +AA
Sbjct: 433 TNLFKQFGDIAYCKVVVDHLTQHSKGSAFVKYRSAESVTQCLAA 476
Score = 44.8 bits (101), Expect = 7e-05
Identities = 41/184 (22%), Positives = 78/184 (42%), Gaps = 10/184 (5%)
Frame = +2
Query: 179 SQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFA 358
S+ + +AP D R + + GL T+K++ GE+E + +
Sbjct: 145 SKSKSLRKAPQTDAGRTVILSGLPASITEKQIYKRCRKLGEVEKTIFPVAGHDSPTASLL 204
Query: 359 FIVFK-APESIDKVMAAGEHTINNKKVDPKKAK------ARHGKIFVGGLSSEISDDEIR 517
F +K A +++ K+ + K V K K ++ ++ + L+ ++ ++
Sbjct: 205 FKSYKDARQAVAKLNGKTLKGVKVKAVIESKDKSSSPKGSKKSRLIIRNLAFNCTEAILK 264
Query: 518 NFFSEFGTILEVEMPFDKT--KNQRKGFCFITFESE-QVVNDLLKTPKRTIGGKEVDVXR 688
FS FG + E +P K +N++ GF F+ F + L + + I G+ V V
Sbjct: 265 ETFSAFGEVSEASVPQKKVGRRNRKMGFGFVQFTNVFDAAKALEEMNAKKILGRPVAVDW 324
Query: 689 ATPK 700
A PK
Sbjct: 325 AVPK 328
Score = 35.1 bits (77), Expect = 0.056
Identities = 22/90 (24%), Positives = 36/90 (40%), Gaps = 1/90 (1%)
Frame = +2
Query: 422 NNKKVDPKKAKARHG-KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFC 598
+N K + + G +F+ LS + + I N F +FG I ++ D KG
Sbjct: 401 DNHSQRSKPSDVKEGLTVFIRNLSFDSTQKNITNLFKQFGDIAYCKVVVDHLTQHSKGSA 460
Query: 599 FITFESEQVVNDLLKTPKRTIGGKEVDVXR 688
F+ + S + V L G +D R
Sbjct: 461 FVKYRSAESVTQCLAATDEDSEGLFLDGNR 490
>SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20)
Length = 1313
Score = 47.6 bits (108), Expect = 1e-05
Identities = 31/131 (23%), Positives = 61/131 (46%), Gaps = 6/131 (4%)
Frame = +2
Query: 323 TDPNTGRSRGFAFIVFKAPESIDK-VMAAGEHTINNKKVDPKKAKA----RHGKIFVGGL 487
T P R R + V K+P K ++ + ++ P++ K + K++V L
Sbjct: 1106 TKPRPSR-RSLSKSVSKSPSPARKGKRSSSSSSSRSRSRSPRRRKRSPTPKPTKLYVAHL 1164
Query: 488 SSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF-ESEQVVNDLLKTPKRTIG 664
+ ++ D ++ FS +G + V++P D+T N +GF ++ + + E+ L I
Sbjct: 1165 TRNVNKDHVQEIFSVYGRVKTVDLPTDRTNNLSRGFAYVEYVDPEECEKALKHMDGGQID 1224
Query: 665 GKEVDVXRATP 697
G+E+ V P
Sbjct: 1225 GQEIAVQSVLP 1235
Score = 43.6 bits (98), Expect = 2e-04
Identities = 17/58 (29%), Positives = 33/58 (56%)
Frame = +2
Query: 227 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 400
KL+V L+ +++ F YG ++++++ TD SRGFA++ + PE +K +
Sbjct: 1158 KLYVAHLTRNVNKDHVQEIFSVYGRVKTVDLPTDRTNNLSRGFAYVEYVDPEECEKAL 1215
>SB_31413| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 381
Score = 47.6 bits (108), Expect = 1e-05
Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 5/113 (4%)
Frame = +2
Query: 227 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 406
++F+G + + + EL GEI ++ DP TG ++GFAF F S + +
Sbjct: 154 EVFIGKIPRDCLEDELIPLLEKCGEIREFRLQMDPATGLNKGFAFCTFTEQTSAYQAIT- 212
Query: 407 GEHTINNKKVDPKK----AKAR-HGKIFVGGLSSEISDDEIRNFFSEFGTILE 550
T+N+K + P + K+R + ++FV G+ S +EI FS+ T L+
Sbjct: 213 ---TLNDKDIRPGRRLAICKSRSNSRLFVKGIPKRKSKEEIFQEFSKVTTDLQ 262
Score = 33.5 bits (73), Expect = 0.17
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +2
Query: 467 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 619
++F+G + + +DE+ + G I E + D KGF F TF +
Sbjct: 154 EVFIGKIPRDCLEDELIPLLEKCGEIREFRLQMDPATGLNKGFAFCTFTEQ 204
>SB_6474| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 21/87 (24%)
Frame = +2
Query: 347 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA---------------------KARH 463
+GF F+ F+ P +I+ V+A H ++ K +DPK A A
Sbjct: 142 KGFGFVTFRDPATIESVLAKKPHILDGKTIDPKPAVPRGPGQQAQTGAVMGGPQRGSAND 201
Query: 464 GKIFVGGLSSEISDDEIRNFFSEFGTI 544
GK+F+GGL+ ++++++ +FS +G +
Sbjct: 202 GKVFIGGLAFGTTEEDLKEYFSTYGMV 228
Score = 39.9 bits (89), Expect = 0.002
Identities = 14/33 (42%), Positives = 26/33 (78%)
Frame = +2
Query: 209 GRDDDRKLFVGGLSWETTDKELRDHFGAYGEIE 307
G +D K+F+GGL++ TT+++L+++F YG +E
Sbjct: 197 GSANDGKVFIGGLAFGTTEEDLKEYFSTYGMVE 229
Score = 31.9 bits (69), Expect = 0.52
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = +2
Query: 563 FDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVXRATPK 700
F++ KGF F+TF + +L + GK +D A P+
Sbjct: 134 FERRARMLKGFGFVTFRDPATIESVLAKKPHILDGKTIDPKPAVPR 179
>SB_37827| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 628
Score = 46.8 bits (106), Expect = 2e-05
Identities = 26/86 (30%), Positives = 45/86 (52%)
Frame = +2
Query: 131 TTDNQLNGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIES 310
T DN+ +G+ ++ D D + + DDD GG + ++ +H A G +E+
Sbjct: 428 TGDNR-DGDDDDDDDDDDDDDDDDDDDDDDDDDDDGGGDDDDDYERGAINHSNA-GPLEN 485
Query: 311 INVKTDPNTGRSRGFAFIVFKAPESI 388
+ + TD NTG+ R F F+ F +P S+
Sbjct: 486 VRIPTDKNTGQQRSFGFVEFSSPVSV 511
>SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0)
Length = 298
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = +2
Query: 473 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFE-SEQVVNDLLKTP 649
+VGGL+ E+ + + F FG I +V++P D T ++ +GF F+ FE +E +
Sbjct: 8 YVGGLAEEVDEKVLHAAFIPFGDITDVQIPMDYTTSKHRGFGFVEFEFAEDTAAAIDNMN 67
Query: 650 KRTIGGKEVDVXRATP 697
+ + G+ + V A P
Sbjct: 68 ESELFGRTIRVNLAKP 83
Score = 41.5 bits (93), Expect = 6e-04
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +2
Query: 224 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 382
R +VGGL+ E +K L F +G+I + + D T + RGF F+ F+ E
Sbjct: 5 RVAYVGGLAEEVDEKVLHAAFIPFGDITDVQIPMDYTTSKHRGFGFVEFEFAE 57
>SB_35971| Best HMM Match : RRM_1 (HMM E-Value=0.013)
Length = 665
Score = 45.6 bits (103), Expect = 4e-05
Identities = 21/45 (46%), Positives = 27/45 (60%)
Frame = +2
Query: 326 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 460
D T R RGF F+ F++ S DK H INNKKV+ KKA+ +
Sbjct: 5 DKATQRHRGFGFVTFESENSADKACDTQYHLINNKKVEVKKAQPK 49
Score = 41.9 bits (94), Expect = 5e-04
Identities = 19/46 (41%), Positives = 26/46 (56%)
Frame = +2
Query: 563 FDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVXRATPK 700
FDK + +GF F+TFESE + T I K+V+V +A PK
Sbjct: 4 FDKATQRHRGFGFVTFESENSADKACDTQYHLINNKKVEVKKAQPK 49
>SB_971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 783
Score = 45.2 bits (102), Expect = 5e-05
Identities = 36/136 (26%), Positives = 63/136 (46%), Gaps = 6/136 (4%)
Frame = +2
Query: 167 GGGDSQDHNSAEAPGRDDD---RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNT 337
GGG+ P +D R LFVG L + ++LR F +G + +++K P
Sbjct: 215 GGGNFTPPQQEYIPPEEDPKATRTLFVGNLETGISCQDLRLSFEKFGVVLDVDIKR-PAR 273
Query: 338 GRSRGFAFIVFKAPESIDKVMAAGEHTI---NNKKVDPKKAKARHGKIFVGGLSSEISDD 508
G+ +AF+ F + K A + N+ K+ +++ + +++VGGL IS
Sbjct: 274 GQGNTYAFVKFADLDVAAKAKCAMQGQCIGRNHIKIGYGRSQ-QTTRLWVGGLGPWISIP 332
Query: 509 EIRNFFSEFGTILEVE 556
E+ F FG I ++
Sbjct: 333 ELEREFDRFGAIRRID 348
Score = 33.1 bits (72), Expect = 0.22
Identities = 18/58 (31%), Positives = 31/58 (53%)
Frame = +2
Query: 437 DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 610
DPK + +FVG L + IS ++R F +FG +L+V++ + Q + F+ F
Sbjct: 232 DPKATRT----LFVGNLETGISCQDLRLSFEKFGVVLDVDIK-RPARGQGNTYAFVKF 284
>SB_29577| Best HMM Match : RRM_1 (HMM E-Value=8.5e-15)
Length = 171
Score = 44.8 bits (101), Expect = 7e-05
Identities = 20/68 (29%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Frame = +2
Query: 428 KKVDPK--KAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 601
KK+ PK + + G I++G + ++EI+ FF +FGT+ + + K + KG+ F
Sbjct: 84 KKIKPKGDEDELSPGVIYLGHIPHGFFENEIKKFFEQFGTVNRIRLSRSKKSARSKGYAF 143
Query: 602 ITFESEQV 625
+ F ++V
Sbjct: 144 VEFACDEV 151
Score = 33.1 bits (72), Expect = 0.22
Identities = 15/62 (24%), Positives = 32/62 (51%)
Frame = +2
Query: 230 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAG 409
+++G + + E++ F +G + I + + RS+G+AF+ F A + + K+ A
Sbjct: 100 IYLGHIPHGFFENEIKKFFEQFGTVNRIRLSRSKKSARSKGYAFVEF-ACDEVAKIAADT 158
Query: 410 EH 415
H
Sbjct: 159 MH 160
>SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 828
Score = 44.4 bits (100), Expect = 9e-05
Identities = 32/136 (23%), Positives = 57/136 (41%), Gaps = 6/136 (4%)
Frame = +2
Query: 230 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AA 406
L V + + TD+ R F A + + + +G S GF F+ + E K +
Sbjct: 49 LIVNYIPQDMTDQTFRMMFEAVASLNNCKIVRHKPSGWSYGFGFVDYNTTEDAQKAIDKL 108
Query: 407 GEHTINNK--KV---DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDK 571
TI NK KV P + ++V + ++ + E R F +G I+ + DK
Sbjct: 109 NGFTIGNKVLKVAFSRPGGDNTKGANLYVCNIPKQLPEAEFRKAFEAYGNIVNCRLLRDK 168
Query: 572 TKNQRKGFCFITFESE 619
+ KG F+ ++ +
Sbjct: 169 STGLPKGCGFVLYDKK 184
Score = 37.9 bits (84), Expect = 0.008
Identities = 17/68 (25%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Frame = +2
Query: 446 KAKARHG-KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 622
K++A G ++V + + + + I F + G + +V++ +D + Q KGFCF+T +++
Sbjct: 268 KSQAPPGCTLYVYNIGYDANQEGITALFGQCGIVNKVDIMWDWQRQQCKGFCFVTMATQE 327
Query: 623 VVNDLLKT 646
+ ++T
Sbjct: 328 EAQNAIQT 335
Score = 33.9 bits (74), Expect = 0.13
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = +2
Query: 206 PGRDDDR--KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 370
PG D+ + L+V + + + E R F AYG I + + D +TG +G F+++
Sbjct: 125 PGGDNTKGANLYVCNIPKQLPEAEFRKAFEAYGNIVNCRLLRDKSTGLPKGCGFVLY 181
>SB_877| Best HMM Match : RRM_1 (HMM E-Value=1e-15)
Length = 145
Score = 44.4 bits (100), Expect = 9e-05
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +2
Query: 218 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 397
D R +++ + L FG YG IE +++ TG+S+GF ++ ++ ES +
Sbjct: 61 DQRTIYIRDFRPDIRKSSLESVFGPYGAIEDLSI-IRTQTGKSKGFGYVTYENAESAQRA 119
Query: 398 MAAGEHTINNKKV--DPK 445
+ AG H I+ K V +PK
Sbjct: 120 L-AGTHIIDGKWVIAEPK 136
>SB_57661| Best HMM Match : RRM_1 (HMM E-Value=0.017)
Length = 255
Score = 35.5 bits (78), Expect = 0.042
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +2
Query: 218 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINV 319
DDRKLFVG +S +++LR F +G IE + V
Sbjct: 212 DDRKLFVGMISKHAKEEDLRVMFSPFGTIEELTV 245
Score = 31.9 bits (69), Expect(2) = 1e-04
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +2
Query: 191 NSAEAPGRDDDR-KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSR 349
N RD + KLFVG + +K+LR F YG+I + + D TG+ +
Sbjct: 158 NGGTTSVRDSNSVKLFVGQVPRTWEEKDLRPIFEPYGQIYELTILKDKYTGQHK 211
Score = 31.5 bits (68), Expect(2) = 1e-04
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +2
Query: 467 KIFVGGLSSEISDDEIRNFFSEFGTILEV 553
K+FVG +S ++++R FS FGTI E+
Sbjct: 215 KLFVGMISKHAKEEDLRVMFSPFGTIEEL 243
>SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/65 (35%), Positives = 33/65 (50%)
Frame = +2
Query: 206 PGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 385
P D L V L++ TT ++L+ F YG++ I + D NT SRGFAF+ F
Sbjct: 10 PEIDGMTSLKVDNLTYRTTVEDLKQVFKKYGDLGDIYIPRDRNTHESRGFAFVRFYEKRD 69
Query: 386 IDKVM 400
+ M
Sbjct: 70 AEDAM 74
>SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0)
Length = 672
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/59 (32%), Positives = 37/59 (62%)
Frame = +2
Query: 467 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 643
+IF G L SE++D+ + F+++ + L+ ++ DK N+ KG+ F++F+ ND +K
Sbjct: 218 RIFCGDLGSEVTDESLTRAFAKYTSFLKAKIVRDKKSNKSKGYGFVSFKDP---NDFIK 273
Score = 41.9 bits (94), Expect = 5e-04
Identities = 19/61 (31%), Positives = 29/61 (47%)
Frame = +2
Query: 218 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 397
+D ++F G L E TD+ L F Y + D + +S+G+ F+ FK P K
Sbjct: 215 NDFRIFCGDLGSEVTDESLTRAFAKYTSFLKAKIVRDKKSNKSKGYGFVSFKDPNDFIKA 274
Query: 398 M 400
M
Sbjct: 275 M 275
>SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 43.6 bits (98), Expect = 2e-04
Identities = 24/95 (25%), Positives = 50/95 (52%), Gaps = 3/95 (3%)
Frame = +2
Query: 218 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 397
++ K ++G L ++ + +L+D F Y ++ + V +D T R RGFAF+ F + ++++
Sbjct: 228 EECKCYIGNLDFKVNEADLQDRFSRY-DVVDVQVISDRETQRPRGFAFVTFGSKKNMEDA 286
Query: 398 ---MAAGEHTINNKKVDPKKAKARHGKIFVGGLSS 493
+ E + KV+ +++ + G GG S
Sbjct: 287 INELDGQEFDGRSMKVNQARSREQRGGGRGGGYRS 321
Score = 37.9 bits (84), Expect = 0.008
Identities = 17/76 (22%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Frame = +2
Query: 467 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL-K 643
K ++G L ++++ ++++ FS + +++V++ D+ + +GF F+TF S++ + D + +
Sbjct: 231 KCYIGNLDFKVNEADLQDRFSRYD-VVDVQVISDRETQRPRGFAFVTFGSKKNMEDAINE 289
Query: 644 TPKRTIGGKEVDVXRA 691
+ G+ + V +A
Sbjct: 290 LDGQEFDGRSMKVNQA 305
Score = 35.1 bits (77), Expect = 0.056
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +2
Query: 308 SINVKTDPNTGRSRGFAFIVFKAPESIDKVM 400
S+ V TD TGR RGF F+ F + + +DK +
Sbjct: 37 SVKVITDRETGRPRGFGFVTFGSEDEMDKAI 67
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +2
Query: 542 ILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL-KTPKRTIGGKEVDVXRATPK 700
+L V++ D+ + +GF F+TF SE ++ + K + G+ + V +A P+
Sbjct: 35 LLSVKVITDRETGRPRGFGFVTFGSEDEMDKAIDKFDGEDLDGRPMKVNKAQPR 88
>SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25)
Length = 159
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/61 (29%), Positives = 35/61 (57%)
Frame = +2
Query: 218 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 397
++ + ++G LS+ ++ L + F ++ + V TD TGR RGF F+ F + E ++K
Sbjct: 3 EEYRCYIGNLSYSVDEQALEEKFHGC-DVVDVKVITDRETGRPRGFGFVTFGSKEEMEKA 61
Query: 398 M 400
+
Sbjct: 62 I 62
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/79 (21%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = +2
Query: 467 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLK 643
+ ++G LS + + + F +++V++ D+ + +GF F+TF S E++ + +
Sbjct: 6 RCYIGNLSYSVDEQALEEKFHGCD-VVDVKVITDRETGRPRGFGFVTFGSKEEMEKAIDE 64
Query: 644 TPKRTIGGKEVDVXRATPK 700
+ G+ + V +A P+
Sbjct: 65 FDGQDFDGRPMKVNQAQPR 83
>SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 215
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/59 (33%), Positives = 32/59 (54%)
Frame = +2
Query: 230 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 406
++VG L + T+ +L F YG++ + + D T SRG AFI+F +S +AA
Sbjct: 12 VYVGNLPYSLTNSDLHKVFERYGKVVKVTILRDKETRESRGVAFILFIDRQSAQNAVAA 70
>SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 871
Score = 41.9 bits (94), Expect = 5e-04
Identities = 36/170 (21%), Positives = 72/170 (42%), Gaps = 14/170 (8%)
Frame = +2
Query: 230 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF----KAPESIDKV 397
LFVG L +E T+ + D YG IE + + TG S+G+ F+ + A ++ ++
Sbjct: 115 LFVGNLPFEFTETQFGDLMSPYGNIERLFLVRSEVTGDSKGYGFVEYATRENAMQAKQQL 174
Query: 398 MAAGEHTINNKKVDPKKAKAR-------HGK-IFVGGLSSEISDDE-IRNFFSEFGTILE 550
+ I + + A++ H + +FV L + + I+ FS+ G +
Sbjct: 175 LNTASKYIGGRILRVAFAESNLLTYADVHSRTLFVDRLPRDFKNGGLIKELFSQTGNVTF 234
Query: 551 VEMPFDKTKNQRKGFCFITF-ESEQVVNDLLKTPKRTIGGKEVDVXRATP 697
++ + +GF F+ + +E+ R + G + V +P
Sbjct: 235 AQVAINPANGGSRGFAFVDYATAEEAEKGQRAHNGRQVEGSNIRVAYGSP 284
Score = 35.5 bits (78), Expect = 0.042
Identities = 27/108 (25%), Positives = 48/108 (44%), Gaps = 1/108 (0%)
Frame = +2
Query: 224 RKLFVGGLSWETTDKEL-RDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 400
R LFV L + + L ++ F G + V +P G SRGFAF+ + E +K
Sbjct: 205 RTLFVDRLPRDFKNGGLIKELFSQTGNVTFAQVAINPANGGSRGFAFVDYATAEEAEK-- 262
Query: 401 AAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTI 544
G+ N ++V+ + +G G + I ++ N + + T+
Sbjct: 263 --GQRAHNGRQVEGSNIRVAYGS--PGRTGASILGSQLDNTQAGYTTV 306
>SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33)
Length = 392
Score = 41.5 bits (93), Expect = 6e-04
Identities = 14/51 (27%), Positives = 31/51 (60%)
Frame = +2
Query: 470 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 622
+FVG + E S+++++ FSE G ++ + FD+ + KG+ F ++ ++
Sbjct: 27 VFVGNIPYEASEEQLKEIFSEVGPVISFRLVFDRETGKPKGYGFCEYKDQE 77
Score = 41.1 bits (92), Expect = 8e-04
Identities = 16/54 (29%), Positives = 32/54 (59%)
Frame = +2
Query: 224 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 385
R +FVG + +E ++++L++ F G + S + D TG+ +G+ F +K E+
Sbjct: 25 RSVFVGNIPYEASEEQLKEIFSEVGPVISFRLVFDRETGKPKGYGFCEYKDQET 78
>SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18)
Length = 209
Score = 41.5 bits (93), Expect = 6e-04
Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Frame = +2
Query: 158 AENGGGDSQDHNSAEAPGRD---DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTD 328
A + G +D + P D D LFV L+ TTD++L F +G I S V D
Sbjct: 95 ARSPNGLIRDDRIGDIPDADIKPPDNVLFVCKLNPVTTDEDLEIIFSRFGTILSCEVIRD 154
Query: 329 PNTGRSRGFAFIVFKAPESIDK 394
TG S +AFI F+ E ++
Sbjct: 155 QKTGESLQYAFIEFEKDEDCER 176
Score = 36.7 bits (81), Expect = 0.018
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +2
Query: 470 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 622
+FV L+ +D+++ FS FGTIL E+ D+ + + FI FE ++
Sbjct: 122 LFVCKLNPVTTDEDLEIIFSRFGTILSCEVIRDQKTGESLQYAFIEFEKDE 172
>SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1291
Score = 41.5 bits (93), Expect = 6e-04
Identities = 16/49 (32%), Positives = 30/49 (61%)
Frame = +2
Query: 215 DDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAF 361
D K+F+GGL + ++++ ++GE+ + N+ D TG S+G+AF
Sbjct: 670 DSPHKIFIGGLPNYLNEDQVKELLSSFGELRAFNLVKDSATGLSKGYAF 718
Score = 38.3 bits (85), Expect = 0.006
Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +2
Query: 467 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK- 643
KIF+GGL + +++D+++ S FG + + D KG+ F + + + ++
Sbjct: 674 KIFIGGLPNYLNEDQVKELLSSFGELRAFNLVKDSATGLSKGYAFCEYVDLGITDVAIQG 733
Query: 644 TPKRTIGGKEVDVXRAT 694
+G K++ V RA+
Sbjct: 734 LNGMQLGDKKLIVQRAS 750
>SB_13046| Best HMM Match : La (HMM E-Value=5e-23)
Length = 442
Score = 41.5 bits (93), Expect = 6e-04
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +2
Query: 506 DEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 622
D ++ FSEFG +L V +P K + KGF FI FES+Q
Sbjct: 102 DWLKKVFSEFGKVLYVSLPRFKHNGEIKGFAFIEFESKQ 140
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/59 (22%), Positives = 30/59 (50%)
Frame = +2
Query: 272 LRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKK 448
L+ F +G++ +++ + G +GFAFI F++ + + V+ KK + ++
Sbjct: 104 LKKVFSEFGKVLYVSLPRFKHNGEIKGFAFIEFESKQQAEHVVQMFNRESKTKKEEKRE 162
>SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 41.1 bits (92), Expect = 8e-04
Identities = 25/80 (31%), Positives = 43/80 (53%)
Frame = +2
Query: 230 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAG 409
L+VGGL + T+++LRDHF +GE+ SI++ N AF+ F + + + AA
Sbjct: 306 LYVGGLEGKVTEQDLRDHFYQFGELRSISMVPRQNC------AFVCFTSRAAAE---AAA 356
Query: 410 EHTINNKKVDPKKAKARHGK 469
+ + N + ++ K GK
Sbjct: 357 DRSFNKLILKGRRLKIMWGK 376
Score = 30.7 bits (66), Expect = 1.2
Identities = 9/30 (30%), Positives = 21/30 (70%)
Frame = +2
Query: 470 IFVGGLSSEISDDEIRNFFSEFGTILEVEM 559
++VGGL ++++ ++R+ F +FG + + M
Sbjct: 306 LYVGGLEGKVTEQDLRDHFYQFGELRSISM 335
>SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1309
Score = 40.7 bits (91), Expect = 0.001
Identities = 36/137 (26%), Positives = 61/137 (44%), Gaps = 22/137 (16%)
Frame = +2
Query: 311 INVKTDPNTGRSRGFAFIVF-------KAPESIDKVMAAGEHTINN---KKVDPKKAKAR 460
+ V DP +S+GF F+ F KA +D V G+ N +K +P + K
Sbjct: 542 VRVVKDPAKNKSKGFGFVSFVRREDAAKAIAEMDSVTIGGKQVKTNWAARKNNPTQTKPL 601
Query: 461 ------------HGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFI 604
+ ++VG L ++ D E++ FS++G+ILE ++ D KG+ FI
Sbjct: 602 VWDDVFHQSSQLNTTVYVGNLPPDVKDYELQQMFSQYGSILETKVFAD------KGYAFI 655
Query: 605 TFESEQVVNDLLKTPKR 655
E+ L + +R
Sbjct: 656 NARGEKRRQRCLTSSRR 672
Score = 33.5 bits (73), Expect = 0.17
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +2
Query: 548 EVEMPFDKTKNQRKGFCFITF-ESEQVVNDLLKTPKRTIGGKEVDVXRATPK 700
EV + D KN+ KGF F++F E + + TIGGK+V A K
Sbjct: 541 EVRVVKDPAKNKSKGFGFVSFVRREDAAKAIAEMDSVTIGGKQVKTNWAARK 592
>SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 39.9 bits (89), Expect = 0.002
Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 3/87 (3%)
Frame = +2
Query: 152 GNAENGGGDSQDHNSAEAPGRDDD---RKLFVGGLSWETTDKELRDHFGAYGEIESINVK 322
GN GGG + + GRD + L V LS++TT L A+ + V
Sbjct: 262 GNTPRGGGRGRGGRGGFSGGRDQNPPNSSLIVRNLSYDTTTDSLG---AAFEGCSNAKVI 318
Query: 323 TDPNTGRSRGFAFIVFKAPESIDKVMA 403
D +G SRGF F+ + E+ KV++
Sbjct: 319 FDRESGESRGFGFVDYDDVETAKKVLS 345
Score = 37.5 bits (83), Expect = 0.010
Identities = 28/111 (25%), Positives = 47/111 (42%)
Frame = +2
Query: 371 KAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 550
K S + + E T KK P K + +F+G LS + ++ + FF E G L
Sbjct: 152 KEESSSESDSDSDEETPTPKKTVPAKEEM---SVFLGNLSFDADEETLAAFFEEKG--LS 206
Query: 551 VEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVXRATPKP 703
+ + +GF + F S++ N L+ G+E+ + A KP
Sbjct: 207 ATCRVITQEGRSRGFGYADFTSKEDYNKALELNGEDCCGREIRINPANSKP 257
Score = 35.1 bits (77), Expect = 0.056
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Frame = +2
Query: 218 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 397
++ +F+G LS++ ++ L F G + V T GRSRGF + F + E +K
Sbjct: 178 EEMSVFLGNLSFDADEETLAAFFEEKGLSATCRVIT--QEGRSRGFGYADFTSKEDYNKA 235
Query: 398 MAA-GEHTINNK-KVDPKKAKARHG 466
+ GE + +++P +K G
Sbjct: 236 LELNGEDCCGREIRINPANSKPSRG 260
>SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39)
Length = 507
Score = 39.5 bits (88), Expect = 0.003
Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Frame = +2
Query: 218 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAP-ESIDK 394
+D +++VG L + +K+L D F YG I +++K G FAF+ F+ P ++ D
Sbjct: 259 NDCRVYVGNLPQDVREKDLHDIFYKYGHIADVDLKN--RRGAGPPFAFVEFEDPRDAEDA 316
Query: 395 VMAAGEHTINNKKVDPKKAKARHGKIFVGG 484
V H + ++ + + G+ GG
Sbjct: 317 VKGRDGHEFDGYRIRVEFPRGGSGRGGGGG 346
>SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 721
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Frame = +2
Query: 230 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFI---VFKAPESIDKVM 400
LFV + E + ++ + F YGEI++++V D TG +G+A + FK +S + +
Sbjct: 295 LFVTNIHEEAQEDDIHELFSDYGEIKNLHVNLDRRTGFIKGYALVEYETFKEAQSALEAL 354
Query: 401 AAGEHTINNKKVD 439
E N VD
Sbjct: 355 NGAEMLGQNISVD 367
Score = 34.7 bits (76), Expect = 0.073
Identities = 13/49 (26%), Positives = 26/49 (53%)
Frame = +2
Query: 470 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 616
+FV + E +D+I FS++G I + + D+ KG+ + +E+
Sbjct: 295 LFVTNIHEEAQEDDIHELFSDYGEIKNLHVNLDRRTGFIKGYALVEYET 343
>SB_29377| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 548
Score = 38.7 bits (86), Expect = 0.005
Identities = 24/81 (29%), Positives = 36/81 (44%)
Frame = +2
Query: 434 VDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFE 613
VD K + +FV L EI+ + + +FFS G I + M D K R + +I F
Sbjct: 62 VDANKVEEIRRTVFVNNLDPEITAEMLLSFFSSCGDIKYIRMGGDDGKPTR--YAYIEFA 119
Query: 614 SEQVVNDLLKTPKRTIGGKEV 676
Q + L+ GGK +
Sbjct: 120 ETQAIVSALQYSGAIFGGKPI 140
>SB_47831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 38.7 bits (86), Expect = 0.005
Identities = 24/104 (23%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Frame = +2
Query: 287 GAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTIN--NKKVDPKKAKAR 460
GA+G + ++ + N ++ + KA E + V A + +K + K +
Sbjct: 20 GAHGLLGALEISPHENYQQNGNSS--TNKAREISNNVAALPIDLVGEVSKDISKYKVVSN 77
Query: 461 HGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKG 592
K+FVG + ++ E+++FF FG ++ ++ D+ K + KG
Sbjct: 78 KCKVFVGNIGFKVRARELKDFFGYFGDVVYAQIIMDRVKKRSKG 121
Score = 33.9 bits (74), Expect = 0.13
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +2
Query: 227 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRG 352
K+FVG + ++ +EL+D FG +G++ + D RS+G
Sbjct: 80 KVFVGNIGFKVRARELKDFFGYFGDVVYAQIIMDRVKKRSKG 121
>SB_34062| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 552
Score = 38.7 bits (86), Expect = 0.005
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 5/93 (5%)
Frame = +2
Query: 377 PESI-DKVMAAGEHTIN-NKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 550
PE++ D+++ + ++N + D + K+FVGGL +I +DEI F FG+ L
Sbjct: 313 PENLADQIVPSLASSLNCSPNSDSEHIPRFSRKVFVGGLPPDIDEDEIHASFCRFGS-LT 371
Query: 551 VEMPF---DKTKNQRKGFCFITFESEQVVNDLL 640
V+ P K+ KG+ F+ + E V L+
Sbjct: 372 VDWPHKAESKSYFPPKGYAFLLYLEEISVQKLI 404
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/63 (25%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = +2
Query: 224 RKLFVGGLSWETTDKELRDHFGAYGE--IESINVKTDPNTGRSRGFAFIVFKAPESIDKV 397
RK+FVGGL + + E+ F +G ++ + + +G+AF+++ S+ K+
Sbjct: 344 RKVFVGGLPPDIDEDEIHASFCRFGSLTVDWPHKAESKSYFPPKGYAFLLYLEEISVQKL 403
Query: 398 MAA 406
++A
Sbjct: 404 ISA 406
>SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07)
Length = 252
Score = 37.5 bits (83), Expect = 0.010
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +2
Query: 305 ESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 400
E++N+ TD TGR RGF F+ F + E ++K +
Sbjct: 123 EAVNIITDRETGRPRGFGFVTFGSKEEMEKAI 154
>SB_1157| Best HMM Match : RRM_1 (HMM E-Value=1.2e-11)
Length = 248
Score = 37.5 bits (83), Expect = 0.010
Identities = 16/55 (29%), Positives = 31/55 (56%)
Frame = +2
Query: 221 DRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 385
+ + ++G LS+ ++ L + F ++ + V TD TGR RGF F+ +A ++
Sbjct: 81 EHRCYIGNLSYSVDEQALEEKFHDCNVVD-VRVITDRETGRPRGFGFVTLEAKKT 134
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/56 (23%), Positives = 31/56 (55%)
Frame = +2
Query: 455 ARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 622
A H + ++G LS + + + F + +++V + D+ + +GF F+T E+++
Sbjct: 80 AEH-RCYIGNLSYSVDEQALEEKFHDCN-VVDVRVITDRETGRPRGFGFVTLEAKK 133
>SB_52510| Best HMM Match : RRM_1 (HMM E-Value=8.1e-21)
Length = 304
Score = 37.1 bits (82), Expect = 0.014
Identities = 20/57 (35%), Positives = 31/57 (54%)
Frame = +2
Query: 200 EAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 370
+ G+ + + V LS ET + +L++ F G I I + D T +S+GFAFI F
Sbjct: 173 DGSGQHETATIRVTNLSEETRESDLQELFRPLGPISRIFLAKDKFTNQSKGFAFINF 229
>SB_46435| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 558
Score = 36.7 bits (81), Expect = 0.018
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 6/72 (8%)
Frame = +2
Query: 203 APGRDD---DRKLFVGGLSWETTDKELRDHFGAYGEIESINVK---TDPNTGRSRGFAFI 364
AP DD +RKL++G L ++ + +GEIE PN G RG+ F+
Sbjct: 377 APEIDDAVSERKLWIGNLDKRLSEFNILKILQQFGEIEHFQFLFHGNGPNRGEPRGYCFV 436
Query: 365 VFKAPESIDKVM 400
FK E K +
Sbjct: 437 EFKKKEDARKAL 448
>SB_35697| Best HMM Match : RRM_1 (HMM E-Value=1.3e-19)
Length = 168
Score = 35.9 bits (79), Expect = 0.032
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +2
Query: 467 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 646
++FVG + ++ +DE+ F G I EV + D Q +G+ F+ + S+ +KT
Sbjct: 75 EVFVGKIPRDLYEDELVPVFETAGPIYEVRLMMD-FNGQNRGYAFVVYTSKDDAKRCVKT 133
Score = 32.3 bits (70), Expect = 0.39
Identities = 19/70 (27%), Positives = 38/70 (54%)
Frame = +2
Query: 227 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 406
++FVG + + + EL F G I + + D N G++RG+AF+V+ + + + +
Sbjct: 75 EVFVGKIPRDLYEDELVPVFETAGPIYEVRLMMDFN-GQNRGYAFVVYTSKDDAKRCV-- 131
Query: 407 GEHTINNKKV 436
T+NN ++
Sbjct: 132 --KTLNNYEI 139
>SB_18026| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 621
Score = 35.5 bits (78), Expect = 0.042
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Frame = +2
Query: 185 DHNSAEAPGRDDDRK----LFVGGLSWETTDKELRDHFGAY--GEIESINVKTDPNTGRS 346
DHNS D + + GL +E++ ++L F I+ + K+ N G++
Sbjct: 316 DHNSDNGSNSQDQEATSTIVRMFGLPFESSKRDLYKFFNGLKIASIDLLKHKSGKNQGKN 375
Query: 347 RGFAFIVFKAPESIDKVMAAGEHTINNKKVD 439
G AF+VFK+ K + I ++ ++
Sbjct: 376 TGVAFVVFKSNNDASKALKMDRSYIGHRYIE 406
>SB_27005| Best HMM Match : NTF2 (HMM E-Value=1.1e-33)
Length = 662
Score = 34.7 bits (76), Expect = 0.073
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = +2
Query: 467 KIFVGGLSSEISDDEIRNFFSEFGTILEV 553
++F+G L S + D ++ FS++GTILE+
Sbjct: 358 QVFIGNLPSGVKDADVNEVFSKYGTILEI 386
Score = 23.8 bits (49), Expect(2) = 3.3
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = +2
Query: 218 DDRKLFVGGLSWETTDKELRDHFGAYGEIESI 313
D ++F+G L D ++ + F YG I I
Sbjct: 355 DSHQVFIGNLPSGVKDADVNEVFSKYGTILEI 386
Score = 23.8 bits (49), Expect(2) = 3.3
Identities = 6/26 (23%), Positives = 17/26 (65%)
Frame = +2
Query: 347 RGFAFIVFKAPESIDKVMAAGEHTIN 424
+ F F++F + E + +++A +H ++
Sbjct: 425 KNFGFVIFSSAEPVQQILANKKHFLS 450
>SB_57434| Best HMM Match : LRR_1 (HMM E-Value=3.9e-13)
Length = 337
Score = 34.3 bits (75), Expect = 0.097
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +2
Query: 221 DRKLFVGGLSWETTDKELRDHFGAYGEIESINVKT 325
DR +FVG L K L+ +F YGE+ES+ ++
Sbjct: 20 DRTVFVGNLPLTLKKKALKKYFSKYGEVESVRFRS 54
>SB_11300| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1148
Score = 34.3 bits (75), Expect = 0.097
Identities = 17/54 (31%), Positives = 29/54 (53%)
Frame = +2
Query: 470 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVN 631
+F+GGL I++ I F G I + + K +N RK FC + F +++ V+
Sbjct: 353 VFIGGLPESINEHIINEIFYVCGEITSIRISKGKGENARK-FCHLRFGAKESVD 405
Score = 31.5 bits (68), Expect = 0.68
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = +2
Query: 224 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID 391
R +F+GGL + + + F GEI SI + +R F + F A ES+D
Sbjct: 351 RTVFIGGLPESINEHIINEIFYVCGEITSIRISKGKGE-NARKFCHLRFGAKESVD 405
>SB_47990| Best HMM Match : RRM_1 (HMM E-Value=7.8e-28)
Length = 440
Score = 33.9 bits (74), Expect = 0.13
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Frame = +2
Query: 227 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 406
K++ G L T+K+L + +G++ ++ K G+A++VFK + D+ +AA
Sbjct: 4 KVYCGRLPATATEKDLENLVKVFGKVREVDFK--------EGYAYVVFKENKDADRAVAA 55
Query: 407 -GEHTINNKKVDPKKAK-ARHGKIFVGGLSS 493
+ K+ +KAK R+G VGG ++
Sbjct: 56 LNNSEFHGAKILMEKAKEMRNG---VGGYTA 83
>SB_20581| Best HMM Match : RRM_1 (HMM E-Value=1.7e-07)
Length = 97
Score = 33.5 bits (73), Expect = 0.17
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +2
Query: 506 DEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 610
++IR+ F ++GTI +V + DK + +G C++ F
Sbjct: 37 EDIRSAFEQYGTIEDVWVVKDKATKENRGVCYVKF 71
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/63 (31%), Positives = 28/63 (44%)
Frame = +2
Query: 266 KELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPK 445
+++R F YG IE + V D T +RG ++ F S +A E N DPK
Sbjct: 37 EDIRSAFEQYGTIEDVWVVKDKATKENRGVCYVKFVKASS--AALACEEMDGRNIGDDPK 94
Query: 446 KAK 454
K
Sbjct: 95 PIK 97
>SB_56343| Best HMM Match : RRM_1 (HMM E-Value=3.2e-14)
Length = 273
Score = 33.1 bits (72), Expect = 0.22
Identities = 20/88 (22%), Positives = 38/88 (43%)
Frame = +2
Query: 176 DSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGF 355
+++D + E G+ LFVG L ++ T +++ DHF G S + T S+G
Sbjct: 58 ETEDVITKEQDGKKQRYILFVGNLPFDLTTEKVLDHFRCAGS-SSFRLLTKKTDNSSKGC 116
Query: 356 AFIVFKAPESIDKVMAAGEHTINNKKVD 439
F+ K + + +K++
Sbjct: 117 GFLEIDDSIGYTKALNLHHSYLGGRKIN 144
>SB_11682| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 184
Score = 33.1 bits (72), Expect = 0.22
Identities = 16/53 (30%), Positives = 29/53 (54%)
Frame = +2
Query: 212 RDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 370
R + K+++G L + +E+ + FG YG ++ + V +P GFAF +F
Sbjct: 28 RAEMTKVYIGSLGDNASKREIENEFGYYGPLKDVWVARNP-----PGFAFCIF 75
>SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1208
Score = 33.1 bits (72), Expect = 0.22
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 293 YGEIESINVKTDPNTGRSRGFAFIVFKAPES 385
YGEI ++N+ D TG+ +GF F+ ++ S
Sbjct: 2 YGEIVNVNLVRDKKTGKQKGFCFLCYEDQRS 32
Score = 31.9 bits (69), Expect = 0.52
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 533 FGTILEVEMPFDKTKNQRKGFCFITFESEQ 622
+G I+ V + DK ++KGFCF+ +E ++
Sbjct: 2 YGEIVNVNLVRDKKTGKQKGFCFLCYEDQR 31
>SB_47564| Best HMM Match : RRM_1 (HMM E-Value=0.23)
Length = 44
Score = 33.1 bits (72), Expect = 0.22
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 293 YGEIESINVKTDPNTGRSRGFAFIVFKAPES 385
YGEI ++N+ D TG+ +GF F+ ++ S
Sbjct: 2 YGEIVNVNLVRDKKTGKQKGFCFLCYEDQRS 32
Score = 31.9 bits (69), Expect = 0.52
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 533 FGTILEVEMPFDKTKNQRKGFCFITFESEQ 622
+G I+ V + DK ++KGFCF+ +E ++
Sbjct: 2 YGEIVNVNLVRDKKTGKQKGFCFLCYEDQR 31
>SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23)
Length = 2386
Score = 32.3 bits (70), Expect = 0.39
Identities = 12/43 (27%), Positives = 31/43 (72%), Gaps = 1/43 (2%)
Frame = +2
Query: 470 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKT-KNQRKGF 595
+++GGLS +++++ + F++FG + +V + D++ K+++ GF
Sbjct: 526 VWIGGLSEDVTENVLLELFNKFGPVKDVVILRDESGKSRQSGF 568
>SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35)
Length = 1118
Score = 31.1 bits (67), Expect = 0.90
Identities = 11/34 (32%), Positives = 23/34 (67%)
Frame = +2
Query: 227 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTD 328
++++G L + TT+ ++R F +YG + IN+K +
Sbjct: 4 RVYLGRLPYGTTEDDVRRFFRSYGRLRDINLKNN 37
>SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1103
Score = 31.1 bits (67), Expect = 0.90
Identities = 25/109 (22%), Positives = 46/109 (42%), Gaps = 2/109 (1%)
Frame = +2
Query: 371 KAPESIDKVMAAGEHTINNKKVDPKKAKARHGK-IFVGGLSSEISDDEIRNFFSEFGTIL 547
K P+S A K P K K GK ++V LSS +++ FS++G ++
Sbjct: 317 KTPDSKKTPAKATPAKATPAKATPTKDKKEGGKSLWVANLSSITRAADLKTRFSQYGKVV 376
Query: 548 EVEMPFDKTKNQRKGFCFITF-ESEQVVNDLLKTPKRTIGGKEVDVXRA 691
++ + + F +T SE+ + + + G+ + V RA
Sbjct: 377 GAKIVTNSKAPGAQCFGLVTMTTSEEAAKCIQHLHRTELHGRAITVDRA 425
>SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 371
Score = 31.1 bits (67), Expect = 0.90
Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 8/87 (9%)
Frame = +2
Query: 218 DDRKLFVGGLSWETTDKELRDHFGAYG-EIESINVKTDPNTG-------RSRGFAFIVFK 373
D K++ G L ++ T EL+ F A + + + +P RSRGF F+ F
Sbjct: 48 DPNKVYAGNLPFKLTQDELKAVFEAESLTVTDVLIVKEPRNEFYQQQEPRSRGFGFVTFA 107
Query: 374 APESIDKVMAAGEHTINNKKVDPKKAK 454
PE + ++N K+V + K
Sbjct: 108 NPEDAQTAV----KSLNGKEVQGRTLK 130
>SB_11425| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 339
Score = 30.7 bits (66), Expect = 1.2
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +2
Query: 230 LFVGGLSWETTDKE-LRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 406
L+VGGL+ T +E L + FG +GEIE I + N AF+ +K+ ++ A
Sbjct: 249 LYVGGLTLHTKLEEWLWEEFGEWGEIEDIRIIPKKN------IAFVRYKS--RLNAEFAK 300
Query: 407 GEHTINNKKVD 439
G+ +++ VD
Sbjct: 301 GDCSLSGAIVD 311
>SB_28070| Best HMM Match : RRM_1 (HMM E-Value=1.3e-07)
Length = 694
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +2
Query: 230 LFVGGLSWETTDKELRDHFGAYGEIESINVKTD 328
L V GLS TT+++LR F YG +E+I + D
Sbjct: 183 LGVFGLSLYTTERDLRPVFEKYGPVEAIQIVYD 215
>SB_19711| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 203
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/68 (29%), Positives = 31/68 (45%)
Frame = +2
Query: 167 GGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRS 346
GGG N + G+D L + L +K+L++ YG + N++ D N G S
Sbjct: 104 GGGGGGMENDVASDGKD----LIIQNLPKGIQEKDLKELLQLYGNVLVCNIERDSN-GDS 158
Query: 347 RGFAFIVF 370
G A + F
Sbjct: 159 SGSALVRF 166
>SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2388
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +2
Query: 209 GRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRG 352
G R++ GL+ K L++ YG I++I V DP T +RG
Sbjct: 135 GTPPQREVLFSGLNDNVDKKFLQEICQKYGTIQTIKVYYDPQTKNTRG 182
>SB_1073| Best HMM Match : Ribosomal_L12 (HMM E-Value=2.2)
Length = 244
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +2
Query: 101 ANNDNFAQXITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 223
A N+ +A+ +T +N N N N ++ ++N+ DDD
Sbjct: 160 AINEKYAKIMTDNNNNNNNNNNNNNNNNNNNNNNNNNNDDD 200
>SB_37378| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 781
Score = 29.5 bits (63), Expect = 2.8
Identities = 11/39 (28%), Positives = 23/39 (58%)
Frame = +2
Query: 494 EISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 610
+ +D+++R+ F FG I V++ D + KG+ ++ F
Sbjct: 63 DFNDEDLRSKFESFGDIEYVQIVRDHKTRENKGYGYVKF 101
>SB_12089| Best HMM Match : RRM_1 (HMM E-Value=7.4e-13)
Length = 260
Score = 29.5 bits (63), Expect = 2.8
Identities = 25/113 (22%), Positives = 47/113 (41%)
Frame = +2
Query: 164 NGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGR 343
+GG S ++ + P ++L V + + D +LR FG++G I + + + G
Sbjct: 53 DGGSPSAENGDSSGP-----KRLHVTNIPFRFRDNDLRQMFGSFGVIADVEIIYN-ERGS 106
Query: 344 SRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEIS 502
F P ++ ++ G T N + KA+ + V G E+S
Sbjct: 107 KHAVRFPTRPNPLNL-RIEGFGFVTFNT-AAEANKAREKLNGTIVDGRKVEVS 157
>SB_8368| Best HMM Match : VWA (HMM E-Value=0)
Length = 771
Score = 29.5 bits (63), Expect = 2.8
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Frame = +2
Query: 230 LFVGGLSWETTDKELRDHFGAY--GEIESINVKTDPNTGR-SRGFAFIVFKAPESIDKVM 400
LF + +TD ++ HF Y E+ ++N+K D + R RG FI S +K+
Sbjct: 167 LFYARIVMYSTDASVKMHFNKYSGAEMNNVNIKRDIDELRLERGLTFIDKALKISAEKLF 226
Query: 401 A-AGEHTINNKKV 436
+N KKV
Sbjct: 227 TEKNGMRLNRKKV 239
>SB_28750| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 70
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +2
Query: 104 NNDNFAQXITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 223
NN+N +N N N N ++ D NS E DDD
Sbjct: 18 NNNNNNNNNNNNNNNNNNNNNNNNNNNDDNSDEDDDDDDD 57
>SB_15012| Best HMM Match : zf-CCHC (HMM E-Value=1.1e-05)
Length = 410
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = +2
Query: 185 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGE 301
DH AP +L V GL WE D++L YGE
Sbjct: 69 DHLLQVAPAEVSRARLQVHGLPWEVPDEDLVALLSPYGE 107
>SB_51896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/58 (31%), Positives = 31/58 (53%)
Frame = +2
Query: 227 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 400
+LFVG LS ET ++L + F YG++ ++KT + FI ++ P ++ M
Sbjct: 7 QLFVGRLSKETKLRDLENVFYLYGKLLRCDLKT--------AYGFIEYEDPRDAEEAM 56
>SB_52029| Best HMM Match : RRM_1 (HMM E-Value=1e-18)
Length = 462
Score = 28.7 bits (61), Expect = 4.8
Identities = 35/157 (22%), Positives = 65/157 (41%), Gaps = 13/157 (8%)
Frame = +2
Query: 185 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFG------AYGEI---ESINVKTDP-N 334
D N ++K+FV + +E+ + L+DH A+ EI E KT P +
Sbjct: 80 DTNRRSRSSGAPEKKVFVSNIPFESRWQNLKDHMNKVVGDVAFAEIFEDEKGRSKTRPED 139
Query: 335 TGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH---GKIFVGGLSSEISD 505
R A +S+ G ++ N +P K+ +FV L +++
Sbjct: 140 ENRMHRSRLRGNSASQSVGGT-GGGLPSLLNLSTNPMMKKSNDPAASTVFVTNLDYKVNW 198
Query: 506 DEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 616
++++ F G ++ E+ D K + KG + FE+
Sbjct: 199 QKLKDTFKCAGHVIRAEIMEDDEK-KSKGMGTVQFET 234
>SB_39378| Best HMM Match : VWA (HMM E-Value=0)
Length = 2865
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/54 (31%), Positives = 30/54 (55%)
Frame = +2
Query: 164 NGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKT 325
NGG + D + A R++ +LFV GL E ++ +LR+ + I+ + +KT
Sbjct: 603 NGGKSTDDASDAAYELRNEGVELFVVGLGDENSEAQLRE-IASVPVIDHVFMKT 655
>SB_50597| Best HMM Match : 7tm_1 (HMM E-Value=2.59941e-42)
Length = 347
Score = 28.3 bits (60), Expect = 6.4
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = -1
Query: 373 LKHNEGKPS*SACVWICLYINT---LYFTVCSKMITELLICGLPAQPTNKKFSVVIASWG 203
LK GK + A +W+ Y++ + F + + + LIC LP P+N F ++ +
Sbjct: 140 LKARGGKLT-IALIWVLTYLSVGFPMAFYMELTKVDDRLIC-LPKWPSNIVFKILTCFFI 197
Query: 202 LSTVMILRITATVLCISIK 146
++ L ITA I IK
Sbjct: 198 SLIIIPLCITAVAYIIMIK 216
>SB_44482| Best HMM Match : RRM_1 (HMM E-Value=0.19)
Length = 486
Score = 28.3 bits (60), Expect = 6.4
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +2
Query: 185 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINV 319
D + EA R++ R ++VG +S ET ++ F YG IE + V
Sbjct: 358 DRSFREA-SREERRIVYVGKISDETHKDDVWRRFRKYGPIEKVTV 401
>SB_1422| Best HMM Match : Synaphin (HMM E-Value=7.3)
Length = 263
Score = 28.3 bits (60), Expect = 6.4
Identities = 32/116 (27%), Positives = 49/116 (42%), Gaps = 10/116 (8%)
Frame = +2
Query: 362 IVFKAPESIDKVMAAGEHTIN--NKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEF 535
+V K DK +AA H I + ++P K K KI L I ++ I+ ++
Sbjct: 87 VVGKDQAEHDKRLAAVLHRITEIDMTLNPDKCKFSEKKIEY--LGQVIDNEGIKKNPAKV 144
Query: 536 GTILEVEMPFDKTK--------NQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVD 679
I+++++P D NQ FC E Q + DLLK + GK D
Sbjct: 145 KAIVDMDVPRDIPSLRRFLGMVNQLMKFCPNLAEKTQPLRDLLKKNSAWVWGKAQD 200
>SB_42035| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 415
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -1
Query: 226 SVVIASWGLSTVMILRITATVLCISIKLV 140
++++ S G++ L ITAT+LC SI L+
Sbjct: 267 TILLESSGVTLPKALHITATILCYSISLL 295
>SB_14704| Best HMM Match : Mak16 (HMM E-Value=9.3)
Length = 189
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +2
Query: 104 NNDNFAQXITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 223
NN+N I +N N N N ++ ++N+ + DDD
Sbjct: 112 NNNNNNNNINNNNNNNNNNNNNNNNNNNNNNNDDDDDDDD 151
>SB_56987| Best HMM Match : Cornifin (HMM E-Value=1.5)
Length = 752
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +2
Query: 179 SQDHNSAEAPGRDD-DRKLFVGGLSWETTDKELRDHFGAYGEI 304
S DHN +PG DD +R++ L ++ + E+R Y EI
Sbjct: 113 SPDHNDLTSPGHDDNEREVIQDSLPIDSPENEVRLAAVLYTEI 155
>SB_41149| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 27.9 bits (59), Expect = 8.4
Identities = 21/85 (24%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Frame = +2
Query: 224 RKLFVGGLSWETTDKELRDHFG--AYGEIES---INVKTDPNTGRSRGFAFIVFKAPESI 388
++ +VG LS + T ++L HFG A + S + + + +G+S GF F+ P+ +
Sbjct: 5 KRFYVGNLSVKATREDLSHHFGLDATPYLRSSCWVELAVE-KSGKSLGFGFV--NVPKHL 61
Query: 389 -DKVMAAGEHTINNKKVDPKKAKAR 460
D +M + + +K++ + A+ +
Sbjct: 62 ADHLMHLNQTKLFDKRITIEPARGK 86
>SB_41060| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 122
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +2
Query: 107 NDNFAQXITTDNQLNGNAENGGGDSQDH-NSAEAPGRDDD 223
ND+ I D+ NGN + G D+ D N E G DDD
Sbjct: 20 NDDDGDDIDDDDG-NGNGNDNGDDNDDDDNDDEGNGDDDD 58
>SB_34393| Best HMM Match : RVT_1 (HMM E-Value=2e-36)
Length = 1198
Score = 27.9 bits (59), Expect = 8.4
Identities = 32/116 (27%), Positives = 48/116 (41%), Gaps = 10/116 (8%)
Frame = +2
Query: 362 IVFKAPESIDKVMAAGEHTINN--KKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEF 535
+V K DK +AA H I ++P K K KI L I ++ I+ ++
Sbjct: 423 VVGKDQAEHDKRLAAVLHRITEIGMTLNPDKCKFSEKKIEY--LGQVIDNEGIKKNPAKV 480
Query: 536 GTILEVEMPFDKTK--------NQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVD 679
I+++++P D NQ FC E Q + DLLK + GK D
Sbjct: 481 KAIVDMDVPRDIPSLRRFLGMVNQLMKFCPNLAERTQPLRDLLKKNSALVWGKAQD 536
>SB_46941| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 231
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/40 (32%), Positives = 16/40 (40%)
Frame = +2
Query: 104 NNDNFAQXITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 223
NN N TT+N N N N D D + +DD
Sbjct: 173 NNINTTTTTTTNNNNNNNNNNNDDDDDDDTDDDDHNNNDD 212
>SB_7529| Best HMM Match : Toxin_29 (HMM E-Value=0.0017)
Length = 691
Score = 27.9 bits (59), Expect = 8.4
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +2
Query: 137 DNQLNGNAENGGGDSQD 187
DN +NG+ ++GGGD D
Sbjct: 594 DNDVNGDGDSGGGDDDD 610
>SB_2941| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 152
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 4/65 (6%)
Frame = +2
Query: 104 NNDNFAQXITTDNQLNGNAE----NGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKE 271
+ND D+++NG + N GGD D + + DDD + G S++ D +
Sbjct: 58 DNDGGDDDDDDDDEVNGGNDDDDFNNGGDCDDDDDDDDDDDDDDDDINKKGASYDDDDDD 117
Query: 272 LRDHF 286
D +
Sbjct: 118 DDDGY 122
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,066,398
Number of Sequences: 59808
Number of extensions: 455571
Number of successful extensions: 2607
Number of sequences better than 10.0: 94
Number of HSP's better than 10.0 without gapping: 1392
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2412
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1841633001
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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