Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_E01
         (655 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022806-1|AAY55222.1|  645|Drosophila melanogaster IP13769p pro...    29   5.5  
BT022799-1|AAY55215.1|  439|Drosophila melanogaster IP13669p pro...    29   5.5  
BT022768-1|AAY55184.1|  646|Drosophila melanogaster IP13869p pro...    29   5.5  
AE014296-248|AAF47491.2|  600|Drosophila melanogaster CG9168-PA ...    29   5.5  

>BT022806-1|AAY55222.1|  645|Drosophila melanogaster IP13769p
           protein.
          Length = 645

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = +2

Query: 395 QIMDSNYKEVSTRENYGSIKKCSWMPFIKQFLVC 496
           + ++ N  E+S  E+Y    KC+  P IK++ +C
Sbjct: 608 ETLNMNVDELSRLESYEKHSKCTRDPIIKKYCIC 641


>BT022799-1|AAY55215.1|  439|Drosophila melanogaster IP13669p
           protein.
          Length = 439

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = +2

Query: 395 QIMDSNYKEVSTRENYGSIKKCSWMPFIKQFLVC 496
           + ++ N  E+S  E+Y    KC+  P IK++ +C
Sbjct: 402 ETLNMNVDELSRLESYEKHSKCTRDPIIKKYCIC 435


>BT022768-1|AAY55184.1|  646|Drosophila melanogaster IP13869p
           protein.
          Length = 646

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = +2

Query: 395 QIMDSNYKEVSTRENYGSIKKCSWMPFIKQFLVC 496
           + ++ N  E+S  E+Y    KC+  P IK++ +C
Sbjct: 609 ETLNMNVDELSRLESYEKHSKCTRDPIIKKYCIC 642


>AE014296-248|AAF47491.2|  600|Drosophila melanogaster CG9168-PA
           protein.
          Length = 600

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = +2

Query: 395 QIMDSNYKEVSTRENYGSIKKCSWMPFIKQFLVC 496
           + ++ N  E+S  E+Y    KC+  P IK++ +C
Sbjct: 563 ETLNMNVDELSRLESYEKHSKCTRDPIIKKYCIC 596


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,614,485
Number of Sequences: 53049
Number of extensions: 473904
Number of successful extensions: 1108
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1080
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1108
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)