Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_D24
         (708 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    26   0.26 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    26   0.26 
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    23   1.8  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           23   2.4  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        22   5.6  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   9.8  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   9.8  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 26.2 bits (55), Expect = 0.26
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = +2

Query: 467 PKKKQWSFSINKCIYRAWPRPPATLF 544
           P+   W  ++ KC+Y+ W  P  + F
Sbjct: 132 PEVGTWIRAVRKCLYKLWKMPSLSEF 157


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 26.2 bits (55), Expect = 0.26
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = +2

Query: 467 PKKKQWSFSINKCIYRAWPRPPATLF 544
           P+   W  ++ KC+Y+ W  P  + F
Sbjct: 132 PEVGTWIRAVRKCLYKLWKMPSLSEF 157


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +1

Query: 595 SIDETTQAMAFDGINFKGQSLKIRRPHD 678
           S+D   Q   F+G N K + L+ R P +
Sbjct: 69  SVDVLLQEAVFEGTNRKNRVLQWREPEE 96


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +2

Query: 299 RDSSISRHYNTRRCKRRVRFLP 364
           R S +  + +  RCKR+++F+P
Sbjct: 56  RTSVLVTNNSDLRCKRKIQFMP 77


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 349 GQIPANIVADTPQAA 393
           G+IP NI+   PQ A
Sbjct: 45  GEIPQNIIQQQPQQA 59


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -1

Query: 648 PFKINTVKSHCLC 610
           P   NTV SHC C
Sbjct: 142 PNATNTVWSHCQC 154


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -1

Query: 648 PFKINTVKSHCLC 610
           P   NTV SHC C
Sbjct: 142 PNATNTVWSHCQC 154


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,267
Number of Sequences: 336
Number of extensions: 3545
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)