Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_D24
(708 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L23404-1|AAA03548.1| 416|Drosophila melanogaster RNA binding pr... 282 3e-76
AY069320-1|AAL39465.1| 416|Drosophila melanogaster LD03714p pro... 282 3e-76
AE014298-2376|AAF48596.1| 416|Drosophila melanogaster CG9998-PA... 282 3e-76
AE013599-3557|AAF46969.1| 449|Drosophila melanogaster CG3162-PA... 183 2e-46
AY075220-1|AAL68087.1| 449|Drosophila melanogaster AT16577p pro... 181 1e-45
M33496-2|AAA03215.1| 698|Drosophila melanogaster protein ( D.me... 38 0.010
M33496-1|AAA03214.1| 700|Drosophila melanogaster protein ( D.me... 38 0.010
AY119651-1|AAM50305.1| 700|Drosophila melanogaster RE58280p pro... 38 0.010
AE014298-2380|AAX52501.1| 698|Drosophila melanogaster CG4211-PC... 38 0.010
AE014298-2379|AAF48597.2| 700|Drosophila melanogaster CG4211-PA... 38 0.010
AE014298-2378|AAN09398.1| 742|Drosophila melanogaster CG4211-PB... 38 0.010
X55902-1|CAA39395.1| 700|Drosophila melanogaster Bj6 protein pr... 38 0.013
L34934-1|AAA73522.1| 224|Drosophila melanogaster RNA binding pr... 37 0.031
AY075519-1|AAL68327.1| 224|Drosophila melanogaster RE69521p pro... 37 0.031
AY070631-1|AAL48102.1| 224|Drosophila melanogaster RE74211p pro... 37 0.031
AF116341-1|AAF00976.1| 224|Drosophila melanogaster poly(A)-bind... 37 0.031
AE013599-599|AAM68852.1| 224|Drosophila melanogaster CG2163-PB,... 37 0.031
AE013599-598|AAF59127.1| 224|Drosophila melanogaster CG2163-PA,... 37 0.031
BT004860-1|AAO45216.1| 437|Drosophila melanogaster RE27227p pro... 36 0.054
AF170082-1|AAD47839.1| 419|Drosophila melanogaster cleavage sti... 36 0.054
AE014297-2555|AAF55577.2| 419|Drosophila melanogaster CG7697-PA... 36 0.054
AE014297-773|AAF54259.1| 91|Drosophila melanogaster CG8021-PA ... 36 0.054
AY058477-1|AAL13706.1| 529|Drosophila melanogaster GH28335p pro... 32 0.66
AE014297-2865|AAN13835.1| 529|Drosophila melanogaster CG17838-P... 32 0.66
U31961-18|AAA84417.1| 642|Drosophila melanogaster protein ( Dro... 31 1.2
AY119141-1|AAM51001.1| 411|Drosophila melanogaster RE44625p pro... 31 1.2
AY051919-1|AAK93343.1| 255|Drosophila melanogaster LD40489p pro... 31 1.2
AF234157-1|AAF60294.1| 255|Drosophila melanogaster SR family sp... 31 1.2
AF232773-1|AAF43413.1| 255|Drosophila melanogaster SR family sp... 31 1.2
AE014297-2248|AAF55347.1| 630|Drosophila melanogaster CG10328-P... 31 1.2
AE014297-2188|AAF55300.1| 255|Drosophila melanogaster CG6987-PA... 31 1.2
AY051860-1|AAK93284.1| 594|Drosophila melanogaster LD35730p pro... 30 3.5
AE014134-1228|AAN10619.1| 287|Drosophila melanogaster CG11266-P... 30 3.5
AE014134-1227|AAN10618.1| 287|Drosophila melanogaster CG11266-P... 30 3.5
AE014134-1226|AAN10615.2| 287|Drosophila melanogaster CG11266-P... 30 3.5
AE014134-1225|AAN10617.1| 287|Drosophila melanogaster CG11266-P... 30 3.5
AE014134-1224|AAN10616.1| 287|Drosophila melanogaster CG11266-P... 30 3.5
AE014134-1223|AAN10614.1| 594|Drosophila melanogaster CG11266-P... 30 3.5
AE014134-1222|AAF52478.1| 594|Drosophila melanogaster CG11266-P... 30 3.5
AY061516-1|AAL29064.1| 418|Drosophila melanogaster LD46870p pro... 29 4.7
AE014297-14|AAF52166.2| 418|Drosophila melanogaster CG14641-PA ... 29 4.7
AE014298-2037|AAF48376.4| 205|Drosophila melanogaster CG14414-P... 29 6.2
AY069521-1|AAL39666.2| 958|Drosophila melanogaster LD23810p pro... 29 8.2
AE014298-3112|AAN09672.1| 90|Drosophila melanogaster CG33714-P... 29 8.2
AE014298-3111|AAN09673.1| 90|Drosophila melanogaster CG33714-P... 29 8.2
AE013599-3105|AAF46654.1| 957|Drosophila melanogaster CG9346-PA... 29 8.2
>L23404-1|AAA03548.1| 416|Drosophila melanogaster RNA binding
protein protein.
Length = 416
Score = 282 bits (692), Expect = 3e-76
Identities = 131/145 (90%), Positives = 137/145 (94%), Gaps = 1/145 (0%)
Frame = +1
Query: 277 LYWDVPPPGFEHITPLQYKAMQAAGQIPANIVADTPQAAVPVVGSTITRQARRLYVGNIP 456
LYWDVPPPGFEHITP+QYKAMQA+GQIPA++V DTPQ AVPVVGSTITRQARRLYVGNIP
Sbjct: 42 LYWDVPPPGFEHITPMQYKAMQASGQIPASVVPDTPQTAVPVVGSTITRQARRLYVGNIP 101
Query: 457 FGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAFLEFRSIDETTQAMAFDGI 636
FGVTEEE MEFFNQQMHL GLAQAAG+PVLACQINLDKNFAFLEFRSIDETTQAMAFDGI
Sbjct: 102 FGVTEEEMMEFFNQQMHLVGLAQAAGSPVLACQINLDKNFAFLEFRSIDETTQAMAFDGI 161
Query: 637 NFKGQSLKIRRPHDYXPMPG-TENP 708
N KGQSLKIRRPHDY PMPG T+ P
Sbjct: 162 NLKGQSLKIRRPHDYQPMPGITDTP 186
>AY069320-1|AAL39465.1| 416|Drosophila melanogaster LD03714p
protein.
Length = 416
Score = 282 bits (692), Expect = 3e-76
Identities = 131/145 (90%), Positives = 137/145 (94%), Gaps = 1/145 (0%)
Frame = +1
Query: 277 LYWDVPPPGFEHITPLQYKAMQAAGQIPANIVADTPQAAVPVVGSTITRQARRLYVGNIP 456
LYWDVPPPGFEHITP+QYKAMQA+GQIPA++V DTPQ AVPVVGSTITRQARRLYVGNIP
Sbjct: 42 LYWDVPPPGFEHITPMQYKAMQASGQIPASVVPDTPQTAVPVVGSTITRQARRLYVGNIP 101
Query: 457 FGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAFLEFRSIDETTQAMAFDGI 636
FGVTEEE MEFFNQQMHL GLAQAAG+PVLACQINLDKNFAFLEFRSIDETTQAMAFDGI
Sbjct: 102 FGVTEEEMMEFFNQQMHLVGLAQAAGSPVLACQINLDKNFAFLEFRSIDETTQAMAFDGI 161
Query: 637 NFKGQSLKIRRPHDYXPMPG-TENP 708
N KGQSLKIRRPHDY PMPG T+ P
Sbjct: 162 NLKGQSLKIRRPHDYQPMPGITDTP 186
>AE014298-2376|AAF48596.1| 416|Drosophila melanogaster CG9998-PA
protein.
Length = 416
Score = 282 bits (692), Expect = 3e-76
Identities = 131/145 (90%), Positives = 137/145 (94%), Gaps = 1/145 (0%)
Frame = +1
Query: 277 LYWDVPPPGFEHITPLQYKAMQAAGQIPANIVADTPQAAVPVVGSTITRQARRLYVGNIP 456
LYWDVPPPGFEHITP+QYKAMQA+GQIPA++V DTPQ AVPVVGSTITRQARRLYVGNIP
Sbjct: 42 LYWDVPPPGFEHITPMQYKAMQASGQIPASVVPDTPQTAVPVVGSTITRQARRLYVGNIP 101
Query: 457 FGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAFLEFRSIDETTQAMAFDGI 636
FGVTEEE MEFFNQQMHL GLAQAAG+PVLACQINLDKNFAFLEFRSIDETTQAMAFDGI
Sbjct: 102 FGVTEEEMMEFFNQQMHLVGLAQAAGSPVLACQINLDKNFAFLEFRSIDETTQAMAFDGI 161
Query: 637 NFKGQSLKIRRPHDYXPMPG-TENP 708
N KGQSLKIRRPHDY PMPG T+ P
Sbjct: 162 NLKGQSLKIRRPHDYQPMPGITDTP 186
>AE013599-3557|AAF46969.1| 449|Drosophila melanogaster CG3162-PA
protein.
Length = 449
Score = 183 bits (445), Expect = 2e-46
Identities = 86/142 (60%), Positives = 104/142 (73%), Gaps = 5/142 (3%)
Frame = +1
Query: 283 WDVPPPGFEHITPLQYKAMQAAGQIPANIVADTPQAAVPVVGSTITRQARRLYVGNIPFG 462
WD+PP G+ H+TP QYKAM A+GQI + I++D S ITRQARRLYVGNIPFG
Sbjct: 62 WDIPPEGYNHLTPQQYKAMLASGQIASRILSDGVHGGESAAISMITRQARRLYVGNIPFG 121
Query: 463 VTEEETMEFFNQQMHLSGLAQAA-----GNPVLACQINLDKNFAFLEFRSIDETTQAMAF 627
VT+EE M+FFN Q+ G + GN VL CQ NL+KNFAFLEFRSIDE +QA+ F
Sbjct: 122 VTDEEMMQFFNHQIMALGFEAKSSHYMDGNAVLTCQTNLEKNFAFLEFRSIDEASQALNF 181
Query: 628 DGINFKGQSLKIRRPHDYXPMP 693
DG+ F+GQ+LKIRRPHDY P+P
Sbjct: 182 DGMVFRGQTLKIRRPHDYQPVP 203
>AY075220-1|AAL68087.1| 449|Drosophila melanogaster AT16577p
protein.
Length = 449
Score = 181 bits (440), Expect = 1e-45
Identities = 85/142 (59%), Positives = 104/142 (73%), Gaps = 5/142 (3%)
Frame = +1
Query: 283 WDVPPPGFEHITPLQYKAMQAAGQIPANIVADTPQAAVPVVGSTITRQARRLYVGNIPFG 462
WD+PP G+ H+TP Q+KAM A+GQI + I++D S ITRQARRLYVGNIPFG
Sbjct: 62 WDIPPEGYNHLTPQQHKAMLASGQIASRILSDGVHGGESAAISMITRQARRLYVGNIPFG 121
Query: 463 VTEEETMEFFNQQMHLSGLAQAA-----GNPVLACQINLDKNFAFLEFRSIDETTQAMAF 627
VT+EE M+FFN Q+ G + GN VL CQ NL+KNFAFLEFRSIDE +QA+ F
Sbjct: 122 VTDEEMMQFFNHQIMALGFEAKSSHYMDGNAVLTCQTNLEKNFAFLEFRSIDEASQALNF 181
Query: 628 DGINFKGQSLKIRRPHDYXPMP 693
DG+ F+GQ+LKIRRPHDY P+P
Sbjct: 182 DGMVFRGQTLKIRRPHDYQPVP 203
>M33496-2|AAA03215.1| 698|Drosophila melanogaster protein (
D.melanogaster no-on-transient A gene product, complete
cds. ).
Length = 698
Score = 38.3 bits (85), Expect = 0.010
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = +1
Query: 433 RLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAFLEFRSIDETT 612
RLYVGN+ +T++E E F +S + NLDKNF FL+
Sbjct: 303 RLYVGNLTNDITDDELREMFKPYGEISEIFS-----------NLDKNFTFLKVDYHPNAE 351
Query: 613 QA-MAFDGINFKGQSLKIR 666
+A A DG KG+ L++R
Sbjct: 352 KAKRALDGSMRKGRQLRVR 370
>M33496-1|AAA03214.1| 700|Drosophila melanogaster protein (
D.melanogaster no-on-transient A gene product, complete
cds. ).
Length = 700
Score = 38.3 bits (85), Expect = 0.010
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = +1
Query: 433 RLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAFLEFRSIDETT 612
RLYVGN+ +T++E E F +S + NLDKNF FL+
Sbjct: 303 RLYVGNLTNDITDDELREMFKPYGEISEIFS-----------NLDKNFTFLKVDYHPNAE 351
Query: 613 QA-MAFDGINFKGQSLKIR 666
+A A DG KG+ L++R
Sbjct: 352 KAKRALDGSMRKGRQLRVR 370
>AY119651-1|AAM50305.1| 700|Drosophila melanogaster RE58280p
protein.
Length = 700
Score = 38.3 bits (85), Expect = 0.010
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = +1
Query: 433 RLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAFLEFRSIDETT 612
RLYVGN+ +T++E E F +S + NLDKNF FL+
Sbjct: 303 RLYVGNLTNDITDDELREMFKPYGEISEIFS-----------NLDKNFTFLKVDYHPNAE 351
Query: 613 QA-MAFDGINFKGQSLKIR 666
+A A DG KG+ L++R
Sbjct: 352 KAKRALDGSMRKGRQLRVR 370
>AE014298-2380|AAX52501.1| 698|Drosophila melanogaster CG4211-PC,
isoform C protein.
Length = 698
Score = 38.3 bits (85), Expect = 0.010
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = +1
Query: 433 RLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAFLEFRSIDETT 612
RLYVGN+ +T++E E F +S + NLDKNF FL+
Sbjct: 303 RLYVGNLTNDITDDELREMFKPYGEISEIFS-----------NLDKNFTFLKVDYHPNAE 351
Query: 613 QA-MAFDGINFKGQSLKIR 666
+A A DG KG+ L++R
Sbjct: 352 KAKRALDGSMRKGRQLRVR 370
>AE014298-2379|AAF48597.2| 700|Drosophila melanogaster CG4211-PA,
isoform A protein.
Length = 700
Score = 38.3 bits (85), Expect = 0.010
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = +1
Query: 433 RLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAFLEFRSIDETT 612
RLYVGN+ +T++E E F +S + NLDKNF FL+
Sbjct: 303 RLYVGNLTNDITDDELREMFKPYGEISEIFS-----------NLDKNFTFLKVDYHPNAE 351
Query: 613 QA-MAFDGINFKGQSLKIR 666
+A A DG KG+ L++R
Sbjct: 352 KAKRALDGSMRKGRQLRVR 370
>AE014298-2378|AAN09398.1| 742|Drosophila melanogaster CG4211-PB,
isoform B protein.
Length = 742
Score = 38.3 bits (85), Expect = 0.010
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = +1
Query: 433 RLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAFLEFRSIDETT 612
RLYVGN+ +T++E E F +S + NLDKNF FL+
Sbjct: 303 RLYVGNLTNDITDDELREMFKPYGEISEIFS-----------NLDKNFTFLKVDYHPNAE 351
Query: 613 QA-MAFDGINFKGQSLKIR 666
+A A DG KG+ L++R
Sbjct: 352 KAKRALDGSMRKGRQLRVR 370
>X55902-1|CAA39395.1| 700|Drosophila melanogaster Bj6 protein
protein.
Length = 700
Score = 37.9 bits (84), Expect = 0.013
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = +1
Query: 433 RLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAFLEFRSIDETT 612
RLYVGN+ +T++E E F +S + NLDKNF FL+
Sbjct: 303 RLYVGNLTNDITDDELREMFKPYGEISEIFS-----------NLDKNFTFLKVDYHPNRE 351
Query: 613 QA-MAFDGINFKGQSLKIR 666
+A A DG KG+ L++R
Sbjct: 352 KAKRALDGSMRKGRQLRVR 370
>L34934-1|AAA73522.1| 224|Drosophila melanogaster RNA binding
protein protein.
Length = 224
Score = 36.7 bits (81), Expect = 0.031
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Frame = +1
Query: 430 RRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQIN-LDKNFAFLEFRSIDE 606
R +YVGN+ +G + EE + H G +L + + K FA++EF S +
Sbjct: 96 RSVYVGNVDYGASAEEL------EAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEF 149
Query: 607 TTQAMAFDGINFKGQSLKIRRPHDYXPMPGTEN 705
A+A + F+G+ +K+ P T N
Sbjct: 150 VETALAMNETLFRGRQIKVMSKRTNRPGLSTTN 182
>AY075519-1|AAL68327.1| 224|Drosophila melanogaster RE69521p
protein.
Length = 224
Score = 36.7 bits (81), Expect = 0.031
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Frame = +1
Query: 430 RRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQIN-LDKNFAFLEFRSIDE 606
R +YVGN+ +G + EE + H G +L + + K FA++EF S +
Sbjct: 96 RSVYVGNVDYGASAEEL------EAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEF 149
Query: 607 TTQAMAFDGINFKGQSLKIRRPHDYXPMPGTEN 705
A+A + F+G+ +K+ P T N
Sbjct: 150 VETALAMNETLFRGRQIKVMSKRTNRPGLSTTN 182
>AY070631-1|AAL48102.1| 224|Drosophila melanogaster RE74211p
protein.
Length = 224
Score = 36.7 bits (81), Expect = 0.031
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Frame = +1
Query: 430 RRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQIN-LDKNFAFLEFRSIDE 606
R +YVGN+ +G + EE + H G +L + + K FA++EF S +
Sbjct: 96 RSVYVGNVDYGASAEEL------EAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEF 149
Query: 607 TTQAMAFDGINFKGQSLKIRRPHDYXPMPGTEN 705
A+A + F+G+ +K+ P T N
Sbjct: 150 VETALAMNETLFRGRQIKVMSKRTNRPGLSTTN 182
>AF116341-1|AAF00976.1| 224|Drosophila melanogaster poly(A)-binding
protein II protein.
Length = 224
Score = 36.7 bits (81), Expect = 0.031
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Frame = +1
Query: 430 RRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQIN-LDKNFAFLEFRSIDE 606
R +YVGN+ +G + EE + H G +L + + K FA++EF S +
Sbjct: 96 RSVYVGNVDYGASAEEL------EAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEF 149
Query: 607 TTQAMAFDGINFKGQSLKIRRPHDYXPMPGTEN 705
A+A + F+G+ +K+ P T N
Sbjct: 150 VETALAMNETLFRGRQIKVMSKRTNRPGLSTTN 182
>AE013599-599|AAM68852.1| 224|Drosophila melanogaster CG2163-PB,
isoform B protein.
Length = 224
Score = 36.7 bits (81), Expect = 0.031
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Frame = +1
Query: 430 RRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQIN-LDKNFAFLEFRSIDE 606
R +YVGN+ +G + EE + H G +L + + K FA++EF S +
Sbjct: 96 RSVYVGNVDYGASAEEL------EAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEF 149
Query: 607 TTQAMAFDGINFKGQSLKIRRPHDYXPMPGTEN 705
A+A + F+G+ +K+ P T N
Sbjct: 150 VETALAMNETLFRGRQIKVMSKRTNRPGLSTTN 182
>AE013599-598|AAF59127.1| 224|Drosophila melanogaster CG2163-PA,
isoform A protein.
Length = 224
Score = 36.7 bits (81), Expect = 0.031
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Frame = +1
Query: 430 RRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQIN-LDKNFAFLEFRSIDE 606
R +YVGN+ +G + EE + H G +L + + K FA++EF S +
Sbjct: 96 RSVYVGNVDYGASAEEL------EAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEF 149
Query: 607 TTQAMAFDGINFKGQSLKIRRPHDYXPMPGTEN 705
A+A + F+G+ +K+ P T N
Sbjct: 150 VETALAMNETLFRGRQIKVMSKRTNRPGLSTTN 182
>BT004860-1|AAO45216.1| 437|Drosophila melanogaster RE27227p
protein.
Length = 437
Score = 35.9 bits (79), Expect = 0.054
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Frame = +1
Query: 409 STITRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAFLE 588
S + + R ++VGNIP+ TEE+ E F++ + L V + K F F E
Sbjct: 9 SIMDKSMRSVFVGNIPYEATEEKLKEIFSEVGPVLSL-----KLVFDRESGKPKGFGFCE 63
Query: 589 FRSIDETTQAMA-FDGINFKGQSLKI 663
++ + AM +G G++L++
Sbjct: 64 YKDQETALSAMRNLNGYEIGGRTLRV 89
>AF170082-1|AAD47839.1| 419|Drosophila melanogaster cleavage
stimulation factor 64kilodalton subunit protein.
Length = 419
Score = 35.9 bits (79), Expect = 0.054
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Frame = +1
Query: 409 STITRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAFLE 588
S + + R ++VGNIP+ TEE+ E F++ + L V + K F F E
Sbjct: 9 SIMDKSMRSVFVGNIPYEATEEKLKEIFSEVGPVLSL-----KLVFDRESGKPKGFGFCE 63
Query: 589 FRSIDETTQAMA-FDGINFKGQSLKI 663
++ + AM +G G++L++
Sbjct: 64 YKDQETALSAMRNLNGYEIGGRTLRV 89
>AE014297-2555|AAF55577.2| 419|Drosophila melanogaster CG7697-PA
protein.
Length = 419
Score = 35.9 bits (79), Expect = 0.054
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Frame = +1
Query: 409 STITRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAFLE 588
S + + R ++VGNIP+ TEE+ E F++ + L V + K F F E
Sbjct: 9 SIMDKSMRSVFVGNIPYEATEEKLKEIFSEVGPVLSL-----KLVFDRESGKPKGFGFCE 63
Query: 589 FRSIDETTQAMA-FDGINFKGQSLKI 663
++ + AM +G G++L++
Sbjct: 64 YKDQETALSAMRNLNGYEIGGRTLRV 89
>AE014297-773|AAF54259.1| 91|Drosophila melanogaster CG8021-PA
protein.
Length = 91
Score = 35.9 bits (79), Expect = 0.054
Identities = 22/92 (23%), Positives = 44/92 (47%)
Frame = +1
Query: 403 VGSTITRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAF 582
+ S R + +L+VGN+P+ + +E +F++ H+ A V Q+ L K++ F
Sbjct: 1 MSSGFVRSSYKLFVGNLPWTIGSKELRTYFSKYGHV-----ANAEVVFDRQLGLSKHYGF 55
Query: 583 LEFRSIDETTQAMAFDGINFKGQSLKIRRPHD 678
+ F D A + G+ L ++R ++
Sbjct: 56 VVFSQRDAFNSASNQNTHFLDGRVLTVQRANE 87
>AY058477-1|AAL13706.1| 529|Drosophila melanogaster GH28335p
protein.
Length = 529
Score = 32.3 bits (70), Expect = 0.66
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +1
Query: 403 VGSTITRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLDKN--F 576
+G TI+ RL+VGNIP +E +E F++ H GL + + + + KN F
Sbjct: 236 IGVTISFNNHRLFVGNIPKNRDRDELIEEFSK--HAPGLYEVI---IYSSPDDKKKNRGF 290
Query: 577 AFLEFRS 597
FLE+ S
Sbjct: 291 CFLEYES 297
>AE014297-2865|AAN13835.1| 529|Drosophila melanogaster CG17838-PB,
isoform B protein.
Length = 529
Score = 32.3 bits (70), Expect = 0.66
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +1
Query: 403 VGSTITRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLDKN--F 576
+G TI+ RL+VGNIP +E +E F++ H GL + + + + KN F
Sbjct: 236 IGVTISFNNHRLFVGNIPKNRDRDELIEEFSK--HAPGLYEVI---IYSSPDDKKKNRGF 290
Query: 577 AFLEFRS 597
FLE+ S
Sbjct: 291 CFLEYES 297
>U31961-18|AAA84417.1| 642|Drosophila melanogaster protein (
Drosophila melanogasterbithorax complex (BX-C), complete
sequence. ).
Length = 642
Score = 31.5 bits (68), Expect = 1.2
Identities = 27/98 (27%), Positives = 41/98 (41%), Gaps = 1/98 (1%)
Frame = +1
Query: 376 DTPQAAVPVVGSTITRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQ 555
+ P +P + R RLYVGN+ T+++ E F + + NP
Sbjct: 261 ELPPIELPTDNKFVGRN--RLYVGNLTSDTTDDDLREMFKPYGEIGDI---FSNP----- 310
Query: 556 INLDKNFAFLEFRSIDETTQA-MAFDGINFKGQSLKIR 666
+KNF FL +A A DG KG+ L++R
Sbjct: 311 ---EKNFTFLRLDYYQNAEKAKRALDGSLRKGRVLRVR 345
>AY119141-1|AAM51001.1| 411|Drosophila melanogaster RE44625p
protein.
Length = 411
Score = 31.5 bits (68), Expect = 1.2
Identities = 27/98 (27%), Positives = 41/98 (41%), Gaps = 1/98 (1%)
Frame = +1
Query: 376 DTPQAAVPVVGSTITRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQ 555
+ P +P + R RLYVGN+ T+++ E F + + NP
Sbjct: 30 ELPPIELPTDNKFVGRN--RLYVGNLTSDTTDDDLREMFKPYGEIGDI---FSNP----- 79
Query: 556 INLDKNFAFLEFRSIDETTQA-MAFDGINFKGQSLKIR 666
+KNF FL +A A DG KG+ L++R
Sbjct: 80 ---EKNFTFLRLDYYQNAEKAKRALDGSLRKGRVLRVR 114
>AY051919-1|AAK93343.1| 255|Drosophila melanogaster LD40489p
protein.
Length = 255
Score = 31.5 bits (68), Expect = 1.2
Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
Frame = +1
Query: 418 TRQARRLYVGNIPFGVTEEETMEFFNQ--QMHLSGLAQAAGNPVLACQINLDKNFAFLEF 591
+R R+YVGN+P + ++ + F++ ++ L G P FAF+EF
Sbjct: 3 SRNECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP-----------FAFVEF 51
Query: 592 RSIDETTQAM-AFDGINFKGQSLKIRRPHDYXP 687
+ A+ A DG ++ G L++ P P
Sbjct: 52 EDARDADDAVKARDGYDYDGYRLRVEFPRGGGP 84
>AF234157-1|AAF60294.1| 255|Drosophila melanogaster SR family
splicing factor protein.
Length = 255
Score = 31.5 bits (68), Expect = 1.2
Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
Frame = +1
Query: 418 TRQARRLYVGNIPFGVTEEETMEFFNQ--QMHLSGLAQAAGNPVLACQINLDKNFAFLEF 591
+R R+YVGN+P + ++ + F++ ++ L G P FAF+EF
Sbjct: 3 SRNECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP-----------FAFVEF 51
Query: 592 RSIDETTQAM-AFDGINFKGQSLKIRRPHDYXP 687
+ A+ A DG ++ G L++ P P
Sbjct: 52 EDARDADDAVKARDGYDYDGYRLRVEFPRGGGP 84
>AF232773-1|AAF43413.1| 255|Drosophila melanogaster SR family
splicing factor SF2 protein.
Length = 255
Score = 31.5 bits (68), Expect = 1.2
Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
Frame = +1
Query: 418 TRQARRLYVGNIPFGVTEEETMEFFNQ--QMHLSGLAQAAGNPVLACQINLDKNFAFLEF 591
+R R+YVGN+P + ++ + F++ ++ L G P FAF+EF
Sbjct: 3 SRNECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP-----------FAFVEF 51
Query: 592 RSIDETTQAM-AFDGINFKGQSLKIRRPHDYXP 687
+ A+ A DG ++ G L++ P P
Sbjct: 52 EDARDADDAVKARDGYDYDGYRLRVEFPRGGGP 84
>AE014297-2248|AAF55347.1| 630|Drosophila melanogaster CG10328-PA
protein.
Length = 630
Score = 31.5 bits (68), Expect = 1.2
Identities = 27/98 (27%), Positives = 41/98 (41%), Gaps = 1/98 (1%)
Frame = +1
Query: 376 DTPQAAVPVVGSTITRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQ 555
+ P +P + R RLYVGN+ T+++ E F + + NP
Sbjct: 249 ELPPIELPTDNKFVGRN--RLYVGNLTSDTTDDDLREMFKPYGEIGDI---FSNP----- 298
Query: 556 INLDKNFAFLEFRSIDETTQA-MAFDGINFKGQSLKIR 666
+KNF FL +A A DG KG+ L++R
Sbjct: 299 ---EKNFTFLRLDYYQNAEKAKRALDGSLRKGRVLRVR 333
>AE014297-2188|AAF55300.1| 255|Drosophila melanogaster CG6987-PA
protein.
Length = 255
Score = 31.5 bits (68), Expect = 1.2
Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
Frame = +1
Query: 418 TRQARRLYVGNIPFGVTEEETMEFFNQ--QMHLSGLAQAAGNPVLACQINLDKNFAFLEF 591
+R R+YVGN+P + ++ + F++ ++ L G P FAF+EF
Sbjct: 3 SRNECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP-----------FAFVEF 51
Query: 592 RSIDETTQAM-AFDGINFKGQSLKIRRPHDYXP 687
+ A+ A DG ++ G L++ P P
Sbjct: 52 EDARDADDAVKARDGYDYDGYRLRVEFPRGGGP 84
>AY051860-1|AAK93284.1| 594|Drosophila melanogaster LD35730p
protein.
Length = 594
Score = 29.9 bits (64), Expect = 3.5
Identities = 16/78 (20%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +1
Query: 433 RLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAFLEFRSIDETT 612
RLYVG++ F +TE+ F + + ++ + K + F+ + + D+
Sbjct: 336 RLYVGSLHFNITEDMLRGIFEPFGKIDAI-----QLIMDTETGRSKGYGFITYHNADDAK 390
Query: 613 QAM-AFDGINFKGQSLKI 663
+A+ +G G+ +K+
Sbjct: 391 KALEQLNGFELAGRLMKV 408
>AE014134-1228|AAN10619.1| 287|Drosophila melanogaster CG11266-PG,
isoform G protein.
Length = 287
Score = 29.9 bits (64), Expect = 3.5
Identities = 16/78 (20%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +1
Query: 433 RLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAFLEFRSIDETT 612
RLYVG++ F +TE+ F + + ++ + K + F+ + + D+
Sbjct: 29 RLYVGSLHFNITEDMLRGIFEPFGKIDAI-----QLIMDTETGRSKGYGFITYHNADDAK 83
Query: 613 QAM-AFDGINFKGQSLKI 663
+A+ +G G+ +K+
Sbjct: 84 KALEQLNGFELAGRLMKV 101
>AE014134-1227|AAN10618.1| 287|Drosophila melanogaster CG11266-PF,
isoform F protein.
Length = 287
Score = 29.9 bits (64), Expect = 3.5
Identities = 16/78 (20%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +1
Query: 433 RLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAFLEFRSIDETT 612
RLYVG++ F +TE+ F + + ++ + K + F+ + + D+
Sbjct: 29 RLYVGSLHFNITEDMLRGIFEPFGKIDAI-----QLIMDTETGRSKGYGFITYHNADDAK 83
Query: 613 QAM-AFDGINFKGQSLKI 663
+A+ +G G+ +K+
Sbjct: 84 KALEQLNGFELAGRLMKV 101
>AE014134-1226|AAN10615.2| 287|Drosophila melanogaster CG11266-PE,
isoform E protein.
Length = 287
Score = 29.9 bits (64), Expect = 3.5
Identities = 16/78 (20%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +1
Query: 433 RLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAFLEFRSIDETT 612
RLYVG++ F +TE+ F + + ++ + K + F+ + + D+
Sbjct: 29 RLYVGSLHFNITEDMLRGIFEPFGKIDAI-----QLIMDTETGRSKGYGFITYHNADDAK 83
Query: 613 QAM-AFDGINFKGQSLKI 663
+A+ +G G+ +K+
Sbjct: 84 KALEQLNGFELAGRLMKV 101
>AE014134-1225|AAN10617.1| 287|Drosophila melanogaster CG11266-PD,
isoform D protein.
Length = 287
Score = 29.9 bits (64), Expect = 3.5
Identities = 16/78 (20%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +1
Query: 433 RLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAFLEFRSIDETT 612
RLYVG++ F +TE+ F + + ++ + K + F+ + + D+
Sbjct: 29 RLYVGSLHFNITEDMLRGIFEPFGKIDAI-----QLIMDTETGRSKGYGFITYHNADDAK 83
Query: 613 QAM-AFDGINFKGQSLKI 663
+A+ +G G+ +K+
Sbjct: 84 KALEQLNGFELAGRLMKV 101
>AE014134-1224|AAN10616.1| 287|Drosophila melanogaster CG11266-PC,
isoform C protein.
Length = 287
Score = 29.9 bits (64), Expect = 3.5
Identities = 16/78 (20%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +1
Query: 433 RLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAFLEFRSIDETT 612
RLYVG++ F +TE+ F + + ++ + K + F+ + + D+
Sbjct: 29 RLYVGSLHFNITEDMLRGIFEPFGKIDAI-----QLIMDTETGRSKGYGFITYHNADDAK 83
Query: 613 QAM-AFDGINFKGQSLKI 663
+A+ +G G+ +K+
Sbjct: 84 KALEQLNGFELAGRLMKV 101
>AE014134-1223|AAN10614.1| 594|Drosophila melanogaster CG11266-PB,
isoform B protein.
Length = 594
Score = 29.9 bits (64), Expect = 3.5
Identities = 16/78 (20%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +1
Query: 433 RLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAFLEFRSIDETT 612
RLYVG++ F +TE+ F + + ++ + K + F+ + + D+
Sbjct: 336 RLYVGSLHFNITEDMLRGIFEPFGKIDAI-----QLIMDTETGRSKGYGFITYHNADDAK 390
Query: 613 QAM-AFDGINFKGQSLKI 663
+A+ +G G+ +K+
Sbjct: 391 KALEQLNGFELAGRLMKV 408
>AE014134-1222|AAF52478.1| 594|Drosophila melanogaster CG11266-PA,
isoform A protein.
Length = 594
Score = 29.9 bits (64), Expect = 3.5
Identities = 16/78 (20%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +1
Query: 433 RLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAFLEFRSIDETT 612
RLYVG++ F +TE+ F + + ++ + K + F+ + + D+
Sbjct: 336 RLYVGSLHFNITEDMLRGIFEPFGKIDAI-----QLIMDTETGRSKGYGFITYHNADDAK 390
Query: 613 QAM-AFDGINFKGQSLKI 663
+A+ +G G+ +K+
Sbjct: 391 KALEQLNGFELAGRLMKV 408
>AY061516-1|AAL29064.1| 418|Drosophila melanogaster LD46870p
protein.
Length = 418
Score = 29.5 bits (63), Expect = 4.7
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +1
Query: 388 AAVPVVGSTITRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLA 522
A++P + R LYVGN+P +TE E + F Q + +A
Sbjct: 218 ASLPTLEPPEDRNITTLYVGNLPEEITEPELRDQFYQFGEIRSIA 262
>AE014297-14|AAF52166.2| 418|Drosophila melanogaster CG14641-PA
protein.
Length = 418
Score = 29.5 bits (63), Expect = 4.7
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +1
Query: 388 AAVPVVGSTITRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLA 522
A++P + R LYVGN+P +TE E + F Q + +A
Sbjct: 218 ASLPTLEPPEDRNITTLYVGNLPEEITEPELRDQFYQFGEIRSIA 262
>AE014298-2037|AAF48376.4| 205|Drosophila melanogaster CG14414-PB,
isoform B protein.
Length = 205
Score = 29.1 bits (62), Expect = 6.2
Identities = 19/84 (22%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Frame = +1
Query: 424 QARRLYVGNIPFGVTEEETMEFFNQ--QMHLSGLAQAAGNPVLACQINLDKNFAFLEFRS 597
+ARR++VGN+ +TE + ++ + + + G P+ + + +AF+ F
Sbjct: 25 EARRIWVGNLDSRITEFQLLKLMQKCGAIEKFDMLFHKGGPM----VGQSRGYAFVTFAQ 80
Query: 598 IDETTQA-MAFDGINFKGQSLKIR 666
+ T A + DG + +S+ +R
Sbjct: 81 NEGATNALLKLDGTSVGNRSIAVR 104
>AY069521-1|AAL39666.2| 958|Drosophila melanogaster LD23810p
protein.
Length = 958
Score = 28.7 bits (61), Expect = 8.2
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Frame = +1
Query: 310 HITPLQYKAMQAAGQIPANIVADTPQ--AAVPVVGSTITRQAR--RLYVGNIPFGVTEEE 477
H P Q A AA +P++ V+ T Q ++ GS T LY+GN+ ++E++
Sbjct: 173 HSAPAQQPAASAA-PVPSSSVSTTSQNSSSSKESGSFDTGDPNTTNLYLGNLNPKISEQQ 231
Query: 478 TMEFFNQQMHLSGL 519
ME F + L+ +
Sbjct: 232 LMEIFGRYGPLASI 245
>AE014298-3112|AAN09672.1| 90|Drosophila melanogaster CG33714-PB,
isoform B protein.
Length = 90
Score = 28.7 bits (61), Expect = 8.2
Identities = 18/71 (25%), Positives = 34/71 (47%)
Frame = +1
Query: 388 AAVPVVGSTITRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLD 567
AAV VG ++ R++VGN+P+ V +E +F + + + N + +
Sbjct: 5 AAVAKVGKSV----HRIFVGNLPWTVGHQELRGYFREFGRV-----VSANVIFDKRTGCS 55
Query: 568 KNFAFLEFRSI 600
K + F+ F S+
Sbjct: 56 KGYGFVSFNSL 66
>AE014298-3111|AAN09673.1| 90|Drosophila melanogaster CG33714-PA,
isoform A protein.
Length = 90
Score = 28.7 bits (61), Expect = 8.2
Identities = 18/71 (25%), Positives = 34/71 (47%)
Frame = +1
Query: 388 AAVPVVGSTITRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQINLD 567
AAV VG ++ R++VGN+P+ V +E +F + + + N + +
Sbjct: 5 AAVAKVGKSV----HRIFVGNLPWTVGHQELRGYFREFGRV-----VSANVIFDKRTGCS 55
Query: 568 KNFAFLEFRSI 600
K + F+ F S+
Sbjct: 56 KGYGFVSFNSL 66
>AE013599-3105|AAF46654.1| 957|Drosophila melanogaster CG9346-PA
protein.
Length = 957
Score = 28.7 bits (61), Expect = 8.2
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Frame = +1
Query: 310 HITPLQYKAMQAAGQIPANIVADTPQ--AAVPVVGSTITRQAR--RLYVGNIPFGVTEEE 477
H P Q A AA +P++ V+ T Q ++ GS T LY+GN+ ++E++
Sbjct: 172 HSAPAQQPAASAA-PVPSSSVSTTSQNSSSSKESGSFDTGDPNTTNLYLGNLNPKISEQQ 230
Query: 478 TMEFFNQQMHLSGL 519
ME F + L+ +
Sbjct: 231 LMEIFGRYGPLASI 244
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,038,380
Number of Sequences: 53049
Number of extensions: 691912
Number of successful extensions: 2125
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 1951
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2110
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3128965752
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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