Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_D15
(651 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9W0S6 Cluster: CG13880-PA; n=7; Neoptera|Rep: CG13880-... 191 1e-47
UniRef50_UPI0000586038 Cluster: PREDICTED: similar to MGC83084 p... 116 4e-25
UniRef50_Q66I81 Cluster: Mitochondrial ribosomal protein L17; n=... 112 8e-24
UniRef50_Q9NRX2 Cluster: 39S ribosomal protein L17, mitochondria... 105 9e-22
UniRef50_Q9N3F3 Cluster: Putative uncharacterized protein; n=2; ... 77 5e-13
UniRef50_UPI000155BB51 Cluster: PREDICTED: hypothetical protein;... 70 6e-11
UniRef50_UPI0000D9DC53 Cluster: PREDICTED: similar to mitochondr... 63 6e-09
UniRef50_O94345 Cluster: Mitochondrial ribosomal protein subunit... 55 2e-06
UniRef50_A7SVP4 Cluster: Predicted protein; n=1; Nematostella ve... 54 3e-06
UniRef50_UPI00015BD099 Cluster: UPI00015BD099 related cluster; n... 48 1e-04
UniRef50_Q5DB72 Cluster: SJCHGC08242 protein; n=1; Schistosoma j... 48 3e-04
UniRef50_O83243 Cluster: 50S ribosomal protein L17; n=4; Bacteri... 48 3e-04
UniRef50_Q749B4 Cluster: 50S ribosomal protein L17; n=38; Bacter... 48 3e-04
UniRef50_Q54TY5 Cluster: Putative uncharacterized protein; n=1; ... 45 0.002
UniRef50_O66482 Cluster: 50S ribosomal protein L17; n=4; Bacteri... 44 0.002
UniRef50_A6PT09 Cluster: 50S ribosomal protein L17; n=1; Victiva... 44 0.004
UniRef50_Q4UD42 Cluster: 50S ribosomal protein L17, putative; n=... 42 0.017
UniRef50_Q9M385 Cluster: 50S ribosomal protein L17, chloroplast ... 42 0.017
UniRef50_A6DE29 Cluster: 50S ribosomal protein L17; n=1; Caminib... 41 0.022
UniRef50_Q6MJ37 Cluster: 50S ribosomal protein L17; n=1; Bdellov... 41 0.022
UniRef50_O51456 Cluster: 50S ribosomal protein L17; n=3; Borreli... 41 0.030
UniRef50_Q1GK03 Cluster: 50S ribosomal protein L17; n=55; cellul... 38 0.21
UniRef50_Q8LD39 Cluster: Ribsomal protein-like; n=12; Magnolioph... 38 0.28
UniRef50_A4C528 Cluster: Sensor protein; n=1; Pseudoalteromonas ... 37 0.36
UniRef50_P0A5V5 Cluster: 50S ribosomal protein L17; n=53; Bacter... 37 0.36
UniRef50_Q9XD08 Cluster: 50S ribosomal protein L17; n=4; Leptosp... 37 0.48
UniRef50_Q9X797 Cluster: 50S ribosomal protein L17; n=10; Bacter... 36 0.64
UniRef50_Q3ZZP5 Cluster: 50S ribosomal protein L17; n=3; Dehaloc... 36 0.64
UniRef50_Q0DHK1 Cluster: Os05g0460700 protein; n=4; Oryza sativa... 36 0.84
UniRef50_Q12G76 Cluster: 50S ribosomal protein L17; n=12; Proteo... 36 0.84
UniRef50_Q8XV39 Cluster: 50S ribosomal protein L17; n=190; Prote... 36 1.1
UniRef50_Q7UZW7 Cluster: 50S ribosomal protein L17; n=7; cellula... 36 1.1
UniRef50_Q4YZV6 Cluster: 50S ribosomal subunit protein L17, puta... 35 1.9
UniRef50_Q1MPP0 Cluster: 50S ribosomal protein L17; n=1; Lawsoni... 35 1.9
UniRef50_Q1IS92 Cluster: 50S ribosomal protein L17; n=2; Acidoba... 35 1.9
UniRef50_Q97DW5 Cluster: Polyketide synthase pksE (Short-chain a... 34 2.6
UniRef50_Q23RC2 Cluster: Ser/Thr protein phosphatase family prot... 34 2.6
UniRef50_A2DXX1 Cluster: Putative uncharacterized protein; n=1; ... 34 2.6
UniRef50_Q11FN1 Cluster: Putative uncharacterized protein; n=1; ... 34 3.4
UniRef50_Q22AG9 Cluster: Putative uncharacterized protein; n=2; ... 34 3.4
UniRef50_Q8D1Y7 Cluster: 50S ribosomal protein L17; n=1; Wiggles... 33 4.5
UniRef50_Q98N32 Cluster: 50S ribosomal protein L17; n=37; Proteo... 33 4.5
UniRef50_Q6CLM8 Cluster: Similar to sp|P22353 Saccharomyces cere... 33 5.9
UniRef50_Q552E6 Cluster: Putative uncharacterized protein; n=2; ... 33 7.8
UniRef50_Q2HB27 Cluster: Putative uncharacterized protein; n=1; ... 33 7.8
>UniRef50_Q9W0S6 Cluster: CG13880-PA; n=7; Neoptera|Rep: CG13880-PA
- Drosophila melanogaster (Fruit fly)
Length = 176
Score = 191 bits (466), Expect = 1e-47
Identities = 95/169 (56%), Positives = 117/169 (69%)
Frame = +1
Query: 1 VSKLVSKXXXXXXXXXXXXKNLKGPXGRLXKLRKTVTGLIKFEXIXLNINRGDEARQYAE 180
V+KL+S+ KN+ GP GRL KLRKTVT L+K E I L NR DEAR YAE
Sbjct: 6 VTKLMSQLRIAVRPNKRHLKNVDGPEGRLLKLRKTVTALVKHERIELFYNRADEARGYAE 65
Query: 181 RLISEAIRHGDCHKPTMDMANFWLLEKQLVHKLFKVLVPRFENSTVSYTKMIKAPKAQNT 360
LIS AIRHGD H+ TM++A++WLLEKQLVHKLFKVLVPR+E VSYT+M KAP+
Sbjct: 66 LLISNAIRHGDRHQATMELADYWLLEKQLVHKLFKVLVPRYETYNVSYTRMYKAPREYPG 125
Query: 361 EHTNKIVLELRGNPYPDLIVKQPNNRLWIQNVLLDAAKYDYRQSKISEI 507
+ + VLELRGNPYP L NR + NVLLD A+ ++R+ K+SE+
Sbjct: 126 IYYRRSVLELRGNPYPSLAADHSQNRNLLHNVLLDEARKEFRRQKLSEL 174
>UniRef50_UPI0000586038 Cluster: PREDICTED: similar to MGC83084
protein; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to MGC83084 protein -
Strongylocentrotus purpuratus
Length = 194
Score = 116 bits (280), Expect = 4e-25
Identities = 61/156 (39%), Positives = 89/156 (57%), Gaps = 1/156 (0%)
Frame = +1
Query: 70 GPXGRLXKLRKTVTGLIKFEXIXLNINRGDEARQYAERLISEAIRHGDCHKPTMDMANFW 249
GP R+ L+ +T L+K+E I L + E ++YAERLI A R GD M +A+FW
Sbjct: 4 GPENRIELLKTLITALVKYERIELGYRKAFETQKYAERLIQVAKR-GDRDPEAMKIADFW 62
Query: 250 LLEKQLVHKLFKVLVPRFENSTVSYTKMIKAPKAQNTEHTNKIVLELRGNPYPDLIVKQP 429
L +K+ +HKLFKVL PRFE+++ ++T++++ P LE GNPYP L +
Sbjct: 63 LKDKKQIHKLFKVLGPRFEDASKNFTQLLRVPGFHEERGRKMAFLEYAGNPYPPLTNEPQ 122
Query: 430 NNRLWIQNVLLDAAKYDYRQSK-ISEIAANIGKDTQ 534
N W+ NVL+D A + + SK + EI D Q
Sbjct: 123 KNPDWLLNVLVDGAVGELKNSKALEEIEVVTASDRQ 158
>UniRef50_Q66I81 Cluster: Mitochondrial ribosomal protein L17; n=11;
Euteleostomi|Rep: Mitochondrial ribosomal protein L17 -
Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 166
Score = 112 bits (269), Expect = 8e-24
Identities = 60/140 (42%), Positives = 79/140 (56%)
Frame = +1
Query: 70 GPXGRLXKLRKTVTGLIKFEXIXLNINRGDEARQYAERLISEAIRHGDCHKPTMDMANFW 249
GP R+ LR +TGL++ E I R DE R YAE+LI A + GD + M MA+FW
Sbjct: 21 GPESRINILRNLLTGLVRHERIETGKARADEVRFYAEKLIDYA-KKGDTDEKAMKMADFW 79
Query: 250 LLEKQLVHKLFKVLVPRFENSTVSYTKMIKAPKAQNTEHTNKIVLELRGNPYPDLIVKQP 429
L EK L+ KLFKVL RFEN T YT M + P +N + VLE +GNP+P L +
Sbjct: 80 LTEKDLIPKLFKVLAVRFENQTAGYTNMARLPNRENLDRAAMAVLEYKGNPFPPLNPVKR 139
Query: 430 NNRLWIQNVLLDAAKYDYRQ 489
+ L + N LL + + Q
Sbjct: 140 VSELNLVNQLLKGYREEKAQ 159
>UniRef50_Q9NRX2 Cluster: 39S ribosomal protein L17, mitochondrial
precursor; n=14; Eutheria|Rep: 39S ribosomal protein
L17, mitochondrial precursor - Homo sapiens (Human)
Length = 175
Score = 105 bits (252), Expect = 9e-22
Identities = 56/142 (39%), Positives = 85/142 (59%)
Frame = +1
Query: 70 GPXGRLXKLRKTVTGLIKFEXIXLNINRGDEARQYAERLISEAIRHGDCHKPTMDMANFW 249
GP R+ LR +TGL++ E I R DE R YAE+LI + GD ++ M MA+FW
Sbjct: 21 GPESRIHLLRNLLTGLVRHERIEAPWARVDEMRGYAEKLIDYG-KLGDTNERAMRMADFW 79
Query: 250 LLEKQLVHKLFKVLVPRFENSTVSYTKMIKAPKAQNTEHTNKIVLELRGNPYPDLIVKQP 429
L EK L+ KLF+VL PR+++ T YT+M++ P ++ + V+E +GN P L + +
Sbjct: 80 LTEKDLIPKLFQVLAPRYKDQTGGYTRMLQIPN-RSLDRAKMAVIEYKGNCLPPLPLPRR 138
Query: 430 NNRLWIQNVLLDAAKYDYRQSK 495
++ L + N LL + D RQS+
Sbjct: 139 DSHLTLLNQLLQGLRQDLRQSQ 160
>UniRef50_Q9N3F3 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 194
Score = 76.6 bits (180), Expect = 5e-13
Identities = 49/147 (33%), Positives = 76/147 (51%), Gaps = 10/147 (6%)
Frame = +1
Query: 82 RLXKLRKTVTGLIKFEXIXLNINRGDEARQYAERLISEAIRHGDCHKPTMDMANFWLLEK 261
RL LR+ VT ++ E L NR EAR Y ERLI + G + T +M +WL EK
Sbjct: 36 RLEVLRRIVTRTVREERAELKWNRAVEARPYLERLIQLGVERGPLDEYTAEMMEWWLPEK 95
Query: 262 QLVHKLFKVLVPRFENSTVSYTKMIKAPK------AQNTEHTNKI----VLELRGNPYPD 411
L+ K+ +V+VPRF++ +T + + P QN K VLE+ GNP+P
Sbjct: 96 DLITKMHEVIVPRFQDRDSPFTSLFRLPPQRLQQFIQNKREVWKRYDIGVLEIDGNPFPQ 155
Query: 412 LIVKQPNNRLWIQNVLLDAAKYDYRQS 492
+ + + I +VLL A +++++
Sbjct: 156 IQADRVDQSESILDVLLADALRNHQKN 182
>UniRef50_UPI000155BB51 Cluster: PREDICTED: hypothetical protein;
n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
hypothetical protein - Ornithorhynchus anatinus
Length = 151
Score = 69.7 bits (163), Expect = 6e-11
Identities = 38/103 (36%), Positives = 54/103 (52%)
Frame = +1
Query: 181 RLISEAIRHGDCHKPTMDMANFWLLEKQLVHKLFKVLVPRFENSTVSYTKMIKAPKAQNT 360
R I + + GD ++ M MA+FWL EK L+ KLF+ L PRF + +YT + + P N
Sbjct: 38 RTIIDYGKLGDTNEKAMRMADFWLTEKDLIPKLFQTLAPRFRDQQGNYTLLQRIPNRSNL 97
Query: 361 EHTNKIVLELRGNPYPDLIVKQPNNRLWIQNVLLDAAKYDYRQ 489
+ V+E RGN P L P R + LL+ + YRQ
Sbjct: 98 DRAKMAVIEYRGNALPPL----PLPRKDVNGTLLNQLLWGYRQ 136
>UniRef50_UPI0000D9DC53 Cluster: PREDICTED: similar to mitochondrial
ribosomal protein L17 isoform 2; n=2; Catarrhini|Rep:
PREDICTED: similar to mitochondrial ribosomal protein
L17 isoform 2 - Macaca mulatta
Length = 152
Score = 62.9 bits (146), Expect = 6e-09
Identities = 44/142 (30%), Positives = 69/142 (48%)
Frame = +1
Query: 70 GPXGRLXKLRKTVTGLIKFEXIXLNINRGDEARQYAERLISEAIRHGDCHKPTMDMANFW 249
GP R+ LR +TGL++ E I R DE R YAE+
Sbjct: 21 GPESRIHLLRNLLTGLVRHERIEAPWARVDEMRGYAEK---------------------- 58
Query: 250 LLEKQLVHKLFKVLVPRFENSTVSYTKMIKAPKAQNTEHTNKIVLELRGNPYPDLIVKQP 429
EK L+ KLF+VL PR+++ YT+M++ P ++ + V+E +GN P L + +
Sbjct: 59 --EKDLIPKLFQVLAPRYKDQNGGYTRMLQIPN-RSLDRAKMAVIEYKGNCLPPLPLPRR 115
Query: 430 NNRLWIQNVLLDAAKYDYRQSK 495
++ L + N LL + D QS+
Sbjct: 116 DSHLTLLNQLLQGLRQDLSQSQ 137
>UniRef50_O94345 Cluster: Mitochondrial ribosomal protein subunit
L8; n=1; Schizosaccharomyces pombe|Rep: Mitochondrial
ribosomal protein subunit L8 - Schizosaccharomyces pombe
(Fission yeast)
Length = 207
Score = 54.8 bits (126), Expect = 2e-06
Identities = 35/108 (32%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Frame = +1
Query: 82 RLXKLRKTVTGLIKFEXIXLNINRGDEARQYAERLISEAIRHGDCHKPTMDMANFWLLEK 261
R LR VT L+K E I + EA+++AE+LI+ A + + +A + EK
Sbjct: 17 RQALLRNLVTSLVKHESIQTTWAKAKEAQRFAEKLITMA-KRANPQNNRKGLAEGMVFEK 75
Query: 262 Q-LVHKLFKVLVPRFENSTVSYTKMIKAPKAQNTEHTNKIVLELRGNP 402
+ + K+F VLVPR+ YT+++K P ++T++ VLE P
Sbjct: 76 ETTLKKVFDVLVPRYNGRRCGYTRLLKLP-PRSTDNAPMGVLEFVDGP 122
>UniRef50_A7SVP4 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 113
Score = 54.0 bits (124), Expect = 3e-06
Identities = 32/108 (29%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Frame = +1
Query: 97 RKTVTGLIKFEXIXLNINRGDEARQYAERLISEAIRHGDCHKPT--MDMANFWLLEKQLV 270
+ +T L++ E I + R + + ER+I A + GD + ++ ++L+ K LV
Sbjct: 8 KNLITALVQHERIETTLTRCQDLARVTERMIDLA-KQGDEETVNSWLMVSGYFLVNKDLV 66
Query: 271 HKLFKVLVPRFENSTVSYTKMIKAPKAQNTEHTNKIVLELRGNPYPDL 414
K+F L+PR+E T YT++ + P + T+ ++EL GN P L
Sbjct: 67 PKVFAELLPRYEGITKGYTQVYRIP-PRKTDSAQMGIVELVGNDLPQL 113
>UniRef50_UPI00015BD099 Cluster: UPI00015BD099 related cluster; n=1;
unknown|Rep: UPI00015BD099 UniRef100 entry - unknown
Length = 118
Score = 48.4 bits (110), Expect = 1e-04
Identities = 31/102 (30%), Positives = 50/102 (49%)
Frame = +1
Query: 82 RLXKLRKTVTGLIKFEXIXLNINRGDEARQYAERLISEAIRHGDCHKPTMDMANFWLLEK 261
R+ +R LI FE I + + R + ERLI+ A + GD ++ L +K
Sbjct: 17 RVALMRSLARSLILFEKIESSEAKLKALRPFVERLITLA-KKGDLASRRRALS--LLPDK 73
Query: 262 QLVHKLFKVLVPRFENSTVSYTKMIKAPKAQNTEHTNKIVLE 387
+ + KLF L PRFE YT+++K P + + T ++E
Sbjct: 74 EAIRKLFTELAPRFEGRNGGYTRIVKLPNRKPGDSTELAIIE 115
>UniRef50_Q5DB72 Cluster: SJCHGC08242 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC08242 protein - Schistosoma
japonicum (Blood fluke)
Length = 198
Score = 47.6 bits (108), Expect = 3e-04
Identities = 37/109 (33%), Positives = 53/109 (48%), Gaps = 22/109 (20%)
Frame = +1
Query: 79 GRLXKLRKTVTGLIKFEXIXLNINRGDEARQYAERLISEAIRHG-------------DCH 219
GR+ LR+ V+ L+ E I L E R YAERLI E + + +
Sbjct: 72 GRMMLLRRYVSKLLDDERIELPWPHAVETRLYAERLIQEGVLASTQQNLVSLFELWKNSN 131
Query: 220 KPTMD---------MANFWLLEKQLVHKLFKVLVPRFENSTVSYTKMIK 339
+P +D ++ FWL E++LV KLFKV VPR+ +YT + K
Sbjct: 132 EPKIDGKLNVGILELSVFWLTEERLVEKLFKVFVPRYRLYQRAYTSLFK 180
>UniRef50_O83243 Cluster: 50S ribosomal protein L17; n=4;
Bacteria|Rep: 50S ribosomal protein L17 - Treponema
pallidum
Length = 164
Score = 47.6 bits (108), Expect = 3e-04
Identities = 33/98 (33%), Positives = 49/98 (50%)
Frame = +1
Query: 97 RKTVTGLIKFEXIXLNINRGDEARQYAERLISEAIRHGDCHKPTMDMANFWLLEKQLVHK 276
R VT L KFE I + E R+ AERLI+ + D +A F + +K ++HK
Sbjct: 22 RNMVTSLFKFERITTTKPKAAEVRRAAERLITRS--KSDSVHNRRQVARF-IWDKAVLHK 78
Query: 277 LFKVLVPRFENSTVSYTKMIKAPKAQNTEHTNKIVLEL 390
LF + PR YT+++K Q + + +VLEL
Sbjct: 79 LFADIGPRMREREGGYTRILKLGLRQG-DAAHVVVLEL 115
>UniRef50_Q749B4 Cluster: 50S ribosomal protein L17; n=38;
Bacteria|Rep: 50S ribosomal protein L17 - Geobacter
sulfurreducens
Length = 175
Score = 47.6 bits (108), Expect = 3e-04
Identities = 28/86 (32%), Positives = 44/86 (51%)
Frame = +1
Query: 82 RLXKLRKTVTGLIKFEXIXLNINRGDEARQYAERLISEAIRHGDCHKPTMDMANFWLLEK 261
R+ R VT L E I + E R AE++I+ R GD H + A ++ +K
Sbjct: 17 RIAMFRNMVTSLFAHERITTTDAKAKELRSIAEKMITLGKR-GDLH--AVRQAASYIRDK 73
Query: 262 QLVHKLFKVLVPRFENSTVSYTKMIK 339
++V KLF + PR++ YT++IK
Sbjct: 74 KVVTKLFSTIAPRYKERDGGYTRIIK 99
>UniRef50_Q54TY5 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 182
Score = 44.8 bits (101), Expect = 0.002
Identities = 28/87 (32%), Positives = 49/87 (56%)
Frame = +1
Query: 82 RLXKLRKTVTGLIKFEXIXLNINRGDEARQYAERLISEAIRHGDCHKPTMDMANFWLLEK 261
R+ LR VT LI+ E I + + R+ A+R+I+ A R+ + + + ++ +K
Sbjct: 17 RMLMLRTMVTQLIRHERIKTTLAKAKALRKEADRIITIAKRNT---RLSHSLVYSYVTDK 73
Query: 262 QLVHKLFKVLVPRFENSTVSYTKMIKA 342
Q++ KLFK L RF + YT+++KA
Sbjct: 74 QVIPKLFKELRLRFGDRPGGYTRVLKA 100
>UniRef50_O66482 Cluster: 50S ribosomal protein L17; n=4;
Bacteria|Rep: 50S ribosomal protein L17 - Aquifex
aeolicus
Length = 118
Score = 44.4 bits (100), Expect = 0.002
Identities = 28/102 (27%), Positives = 44/102 (43%)
Frame = +1
Query: 82 RLXKLRKTVTGLIKFEXIXLNINRGDEARQYAERLISEAIRHGDCHKPTMDMANFWLLEK 261
RL R LI E I + R R + E L+ E + G H ++ L +K
Sbjct: 17 RLALYRSLARALIFDERIETTVERAKALRSFIEPLV-ELAKEGTLHARRQALSR--LPDK 73
Query: 262 QLVHKLFKVLVPRFENSTVSYTKMIKAPKAQNTEHTNKIVLE 387
+ KLF+ + PRFE Y ++IK P + + ++E
Sbjct: 74 PAIKKLFEDIAPRFEGRNGGYVRIIKLPYRRRGDGAEMAIIE 115
>UniRef50_A6PT09 Cluster: 50S ribosomal protein L17; n=1;
Victivallis vadensis ATCC BAA-548|Rep: 50S ribosomal
protein L17 - Victivallis vadensis ATCC BAA-548
Length = 165
Score = 43.6 bits (98), Expect = 0.004
Identities = 27/89 (30%), Positives = 44/89 (49%)
Frame = +1
Query: 82 RLXKLRKTVTGLIKFEXIXLNINRGDEARQYAERLISEAIRHGDCHKPTMDMANFWLLEK 261
R L V+ L + I + + AR +AERLI+ + GD H+ + ++ L +K
Sbjct: 17 RRSMLANMVSSLFEHGSIQTTVVKAKAARSFAERLITIG-KKGDLHRRRLAVSK--LRDK 73
Query: 262 QLVHKLFKVLVPRFENSTVSYTKMIKAPK 348
V KLF + P +E YT+++K K
Sbjct: 74 GAVKKLFDEIAPGYEGRNGGYTRILKLGK 102
>UniRef50_Q4UD42 Cluster: 50S ribosomal protein L17, putative; n=3;
Piroplasmida|Rep: 50S ribosomal protein L17, putative -
Theileria annulata
Length = 164
Score = 41.5 bits (93), Expect = 0.017
Identities = 24/104 (23%), Positives = 48/104 (46%)
Frame = +1
Query: 79 GRLXKLRKTVTGLIKFEXIXLNINRGDEARQYAERLISEAIRHGDCHKPTMDMANFWLLE 258
GR LR T +++ I N+ +A+ ER+I + + H + N +L +
Sbjct: 60 GRKALLRSLTTEVLRHGRIITTFNKARQAKPRVERIIKYSKKENKRHARIL--INSYLYD 117
Query: 259 KQLVHKLFKVLVPRFENSTVSYTKMIKAPKAQNTEHTNKIVLEL 390
+QL + K+ RF+ Y ++ + +++N+ +LEL
Sbjct: 118 RQLTENVLKLAPERFKERHGGYCRIKRLSSCNVGDNSNRAILEL 161
>UniRef50_Q9M385 Cluster: 50S ribosomal protein L17, chloroplast
precursor; n=72; cellular organisms|Rep: 50S ribosomal
protein L17, chloroplast precursor - Arabidopsis
thaliana (Mouse-ear cress)
Length = 211
Score = 41.5 bits (93), Expect = 0.017
Identities = 26/89 (29%), Positives = 43/89 (48%)
Frame = +1
Query: 73 PXGRLXKLRKTVTGLIKFEXIXLNINRGDEARQYAERLISEAIRHGDCHKPTMDMANFWL 252
P R LR T L+K I R R++ +++I+ A + G HK + ++
Sbjct: 109 PDQRKALLRGLTTQLLKHGRIKTTRARASAMRKFVDKMITLA-KDGSLHKRRQALG--YI 165
Query: 253 LEKQLVHKLFKVLVPRFENSTVSYTKMIK 339
EKQ+VH LF + R+ YT++I+
Sbjct: 166 YEKQIVHALFAEVPDRYGERNGGYTRIIR 194
>UniRef50_A6DE29 Cluster: 50S ribosomal protein L17; n=1;
Caminibacter mediatlanticus TB-2|Rep: 50S ribosomal
protein L17 - Caminibacter mediatlanticus TB-2
Length = 123
Score = 41.1 bits (92), Expect = 0.022
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
Frame = +1
Query: 82 RLXKLRKTVTGLIKFEXIXLNINRGDEARQYAERLISEAIRHGDC--HKPTMDMANFWLL 255
R+ LR LI+ E I + + E R+Y E++I+ A D H+
Sbjct: 17 RIALLRNLACDLIENEKIETTVPKAKELRKYIEKIITRAKNSDDLNTHRYVYSKLGSNER 76
Query: 256 EKQLVHKLFKVLVPRFENSTVSYTKMIK 339
K K+ +++ P+F N YT++IK
Sbjct: 77 AKAATKKVIEIIAPKFANRNGGYTRIIK 104
>UniRef50_Q6MJ37 Cluster: 50S ribosomal protein L17; n=1;
Bdellovibrio bacteriovorus|Rep: 50S ribosomal protein
L17 - Bdellovibrio bacteriovorus
Length = 181
Score = 41.1 bits (92), Expect = 0.022
Identities = 27/86 (31%), Positives = 43/86 (50%)
Frame = +1
Query: 82 RLXKLRKTVTGLIKFEXIXLNINRGDEARQYAERLISEAIRHGDCHKPTMDMANFWLLEK 261
R LR VT LI+ I ++R E R++ E+ I+ + GD + ++ F K
Sbjct: 18 RKALLRGLVTSLIEHGRITTTVDRAKEVRRHVEKAITLG-KKGDLSTTRLLLSRF--PNK 74
Query: 262 QLVHKLFKVLVPRFENSTVSYTKMIK 339
+ V + K L PRF+ YT++IK
Sbjct: 75 EAVATIMKDLSPRFKTRPGGYTRIIK 100
>UniRef50_O51456 Cluster: 50S ribosomal protein L17; n=3; Borrelia
burgdorferi group|Rep: 50S ribosomal protein L17 -
Borrelia burgdorferi (Lyme disease spirochete)
Length = 123
Score = 40.7 bits (91), Expect = 0.030
Identities = 31/107 (28%), Positives = 50/107 (46%)
Frame = +1
Query: 82 RLXKLRKTVTGLIKFEXIXLNINRGDEARQYAERLISEAIRHGDCHKPTMDMANFWLLEK 261
R L+ V K E I + E +++AERLI+ A D +++ F + +K
Sbjct: 17 RRALLKNMVISFFKHEKISSTKTKLFEVKRFAERLITRA--KVDTVHNRRELSKF-IHDK 73
Query: 262 QLVHKLFKVLVPRFENSTVSYTKMIKAPKAQNTEHTNKIVLELRGNP 402
+++KLF + P F + YT+MIK K + +LEL P
Sbjct: 74 HILNKLFTKISPVFRQRSGGYTRMIKLGKRYG-DAAEMAILELVEKP 119
>UniRef50_Q1GK03 Cluster: 50S ribosomal protein L17; n=55; cellular
organisms|Rep: 50S ribosomal protein L17 - Silicibacter
sp. (strain TM1040)
Length = 141
Score = 37.9 bits (84), Expect = 0.21
Identities = 26/76 (34%), Positives = 40/76 (52%)
Frame = +1
Query: 115 LIKFEXIXLNINRGDEARQYAERLISEAIRHGDCHKPTMDMANFWLLEKQLVHKLFKVLV 294
LI+ E I + + E R E++I+ A R GD H + L E + V KLF VL
Sbjct: 28 LIEHEQIKTTLPKAKELRPIIEKMITLAKR-GDLHARRQAASK--LKEDKDVAKLFDVLG 84
Query: 295 PRFENSTVSYTKMIKA 342
PR+++ Y +++KA
Sbjct: 85 PRYKDRQGGYVRILKA 100
>UniRef50_Q8LD39 Cluster: Ribsomal protein-like; n=12;
Magnoliophyta|Rep: Ribsomal protein-like - Arabidopsis
thaliana (Mouse-ear cress)
Length = 160
Score = 37.5 bits (83), Expect = 0.28
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Frame = +1
Query: 58 KNLKGPXG-RLXKLRKTVTGLIKFEXIXLNINRGDEARQYAERLISEAIRHGDCHKPTMD 234
+ L P G R+ LR V+ L+K E I + + E R+ A+ +I + G
Sbjct: 5 RKLGRPAGHRMSMLRTMVSQLVKHERIETTVTKAKEVRRLADNMIQLG-KEGSL-SAARR 62
Query: 235 MANFWLLEKQLVHKLFKVLVPRFENSTVSYTKMIK 339
A F + ++HK+F L R+++ YT++++
Sbjct: 63 AAGF-VRGDDVLHKIFTELAHRYKDRAGGYTRLLR 96
>UniRef50_A4C528 Cluster: Sensor protein; n=1; Pseudoalteromonas
tunicata D2|Rep: Sensor protein - Pseudoalteromonas
tunicata D2
Length = 648
Score = 37.1 bits (82), Expect = 0.36
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 3/94 (3%)
Frame = +1
Query: 211 DCHKPTMDMANFWLLEKQLVH-KLFKVLVPRFENSTVSYTKMIKAPKAQNTEHTNKIVLE 387
D + ++D N W L K L ++ VL +TVS K A + NT ++ +L
Sbjct: 462 DHWQESLDKYNTWHLTKPLFKTQILSVLHKHRPRNTVSLPKTASAKQTANTSRNHQCILV 521
Query: 388 LRGNPYPDLIVKQPNNRLWIQNVLLD--AAKYDY 483
+ NP ++ K+ +L Q +++ A DY
Sbjct: 522 VEDNPINQIVAKECLKKLGYQYAVVEHGQAALDY 555
>UniRef50_P0A5V5 Cluster: 50S ribosomal protein L17; n=53;
Bacteria|Rep: 50S ribosomal protein L17 - Mycobacterium
bovis
Length = 180
Score = 37.1 bits (82), Expect = 0.36
Identities = 29/99 (29%), Positives = 46/99 (46%)
Frame = +1
Query: 94 LRKTVTGLIKFEXIXLNINRGDEARQYAERLISEAIRHGDCHKPTMDMANFWLLEKQLVH 273
L T L + I + R YAE+LI+ A + G H + L +K +VH
Sbjct: 21 LANLATSLFEHGRITTTEPKARALRPYAEKLITHA-KKGALHNRREVLKK--LRDKDVVH 77
Query: 274 KLFKVLVPRFENSTVSYTKMIKAPKAQNTEHTNKIVLEL 390
LF + P F + YT++IK +A+ ++ V+EL
Sbjct: 78 TLFAEIGPFFADRDGGYTRIIKI-EARKGDNAPMAVIEL 115
>UniRef50_Q9XD08 Cluster: 50S ribosomal protein L17; n=4;
Leptospira|Rep: 50S ribosomal protein L17 - Leptospira
interrogans
Length = 171
Score = 36.7 bits (81), Expect = 0.48
Identities = 36/152 (23%), Positives = 74/152 (48%), Gaps = 6/152 (3%)
Frame = +1
Query: 94 LRKTVTGLIKFEXIXLNINRGDEARQYAERLISEAIRHGDCH-KPTMDMANFW-----LL 255
+ +T L K+E I + R +AE+LI+ A ++ KP + + N +
Sbjct: 21 INNMITSLFKYERIESTQAKLKVVRSHAEKLITRAKKNLVTDLKPEVQLHNKREVMKRIK 80
Query: 256 EKQLVHKLFKVLVPRFENSTVSYTKMIKAPKAQNTEHTNKIVLELRGNPYPDLIVKQPNN 435
++++V KLF+ + RFE YT+++K + ++++ +LEL ++K+
Sbjct: 81 DREVVVKLFEDIAKRFETKNGGYTRVLKLVN-RISDNSEVGILELTSRKERSTLLKERIE 139
Query: 436 RLWIQNVLLDAAKYDYRQSKISEIAANIGKDT 531
+ IQ A+ + R ++ S +A + K+T
Sbjct: 140 KREIQT----KAREEKRATRKSN-SAPVNKET 166
>UniRef50_Q9X797 Cluster: 50S ribosomal protein L17; n=10;
Bacteria|Rep: 50S ribosomal protein L17 - Mycobacterium
leprae
Length = 170
Score = 36.3 bits (80), Expect = 0.64
Identities = 25/75 (33%), Positives = 40/75 (53%)
Frame = +1
Query: 166 RQYAERLISEAIRHGDCHKPTMDMANFWLLEKQLVHKLFKVLVPRFENSTVSYTKMIKAP 345
R YAE+LI+ A + G H + L +K +VH LF + P F + YT++IK
Sbjct: 45 RPYAEKLITHA-KKGTLHNRREVLKK--LPDKDVVHALFAEIGPFFSDRDGGYTRIIKV- 100
Query: 346 KAQNTEHTNKIVLEL 390
+A+ ++ V+EL
Sbjct: 101 EARKGDNAPMAVIEL 115
>UniRef50_Q3ZZP5 Cluster: 50S ribosomal protein L17; n=3;
Dehalococcoides|Rep: 50S ribosomal protein L17 -
Dehalococcoides sp. (strain CBDB1)
Length = 117
Score = 36.3 bits (80), Expect = 0.64
Identities = 30/107 (28%), Positives = 49/107 (45%), Gaps = 1/107 (0%)
Frame = +1
Query: 73 PXG-RLXKLRKTVTGLIKFEXIXLNINRGDEARQYAERLISEAIRHGDCHKPTMDMANFW 249
P G R+ R VT L+ +E I ++ R E R AE++I+ + G +A +
Sbjct: 13 PTGQRMSLYRNLVTDLLNYEEITISEPRAKEIRSMAEKMITLG-KKGTLASRRRALAFVY 71
Query: 250 LLEKQLVHKLFKVLVPRFENSTVSYTKMIKAPKAQNTEHTNKIVLEL 390
+ +V K+F+ L R+ YT+M K Q + + LEL
Sbjct: 72 M--PGIVEKVFEDLSKRYAERPGGYTRMTKLGPRQG-DGAEMVKLEL 115
>UniRef50_Q0DHK1 Cluster: Os05g0460700 protein; n=4; Oryza
sativa|Rep: Os05g0460700 protein - Oryza sativa subsp.
japonica (Rice)
Length = 196
Score = 35.9 bits (79), Expect = 0.84
Identities = 22/86 (25%), Positives = 43/86 (50%)
Frame = +1
Query: 82 RLXKLRKTVTGLIKFEXIXLNINRGDEARQYAERLISEAIRHGDCHKPTMDMANFWLLEK 261
R+ LR V+ L+K E I + + E R A++++ + G A+ ++
Sbjct: 14 RVSMLRTMVSQLVKHERIETTVAKAKEVRTKADQMVQLG-KEGTLDAARR--ASAFVRGD 70
Query: 262 QLVHKLFKVLVPRFENSTVSYTKMIK 339
+VHKLF L R+++ YT++++
Sbjct: 71 NVVHKLFTELAYRYKDRAGGYTRLLR 96
>UniRef50_Q12G76 Cluster: 50S ribosomal protein L17; n=12;
Proteobacteria|Rep: 50S ribosomal protein L17 -
Polaromonas sp. (strain JS666 / ATCC BAA-500)
Length = 132
Score = 35.9 bits (79), Expect = 0.84
Identities = 25/86 (29%), Positives = 43/86 (50%)
Frame = +1
Query: 82 RLXKLRKTVTGLIKFEXIXLNINRGDEARQYAERLISEAIRHGDCHKPTMDMANFWLLEK 261
RL LR + L++ E I + + E R+ E +I+ A +K +A L ++
Sbjct: 17 RLAMLRNMMNSLLQHEVIKTTLPKAKELRRVVEPMITLAKEPTVANKR---LAFDRLRDR 73
Query: 262 QLVHKLFKVLVPRFENSTVSYTKMIK 339
+V KLF L PR++ YT+++K
Sbjct: 74 DMVVKLFAELGPRYKARPGGYTRILK 99
>UniRef50_Q8XV39 Cluster: 50S ribosomal protein L17; n=190;
Proteobacteria|Rep: 50S ribosomal protein L17 -
Ralstonia solanacearum (Pseudomonas solanacearum)
Length = 132
Score = 35.5 bits (78), Expect = 1.1
Identities = 25/86 (29%), Positives = 41/86 (47%)
Frame = +1
Query: 82 RLXKLRKTVTGLIKFEXIXLNINRGDEARQYAERLISEAIRHGDCHKPTMDMANFWLLEK 261
RL LR L + E I + + E R+ E LI+ A + ++ +A L ++
Sbjct: 17 RLAMLRNMSNSLFQHELIKTTLPKAKELRKVVEPLITLAKKDTVANRR---LAFARLRDR 73
Query: 262 QLVHKLFKVLVPRFENSTVSYTKMIK 339
+V KLF L PR+ YT+++K
Sbjct: 74 DMVTKLFTELGPRYATRPGGYTRILK 99
>UniRef50_Q7UZW7 Cluster: 50S ribosomal protein L17; n=7; cellular
organisms|Rep: 50S ribosomal protein L17 -
Prochlorococcus marinus subsp. pastoris (strain CCMP
1378 / MED4)
Length = 116
Score = 35.5 bits (78), Expect = 1.1
Identities = 28/103 (27%), Positives = 47/103 (45%)
Frame = +1
Query: 82 RLXKLRKTVTGLIKFEXIXLNINRGDEARQYAERLISEAIRHGDCHKPTMDMANFWLLEK 261
R LR T LI+ I R R AER+IS A + G + ++ +K
Sbjct: 17 RKALLRALTTQLIREGRITTTKARAKALRNEAERMISLA-KEGTLSARRRALG--YIYDK 73
Query: 262 QLVHKLFKVLVPRFENSTVSYTKMIKAPKAQNTEHTNKIVLEL 390
+LVH LF+ R+ YT++++ A+ ++ ++EL
Sbjct: 74 KLVHSLFEKAQERYGERNGGYTRIVRT-VARKGDNAQMAIIEL 115
>UniRef50_Q4YZV6 Cluster: 50S ribosomal subunit protein L17,
putative; n=6; Plasmodium|Rep: 50S ribosomal subunit
protein L17, putative - Plasmodium berghei
Length = 166
Score = 34.7 bits (76), Expect = 1.9
Identities = 22/103 (21%), Positives = 48/103 (46%)
Frame = +1
Query: 82 RLXKLRKTVTGLIKFEXIXLNINRGDEARQYAERLISEAIRHGDCHKPTMDMANFWLLEK 261
R LR T +++ I + EAR+ +R+I+ A +H + + + + ++ ++
Sbjct: 63 RRALLRALTTSVLRHGKIITTEAKAKEARRKVDRIITYAKKHFNNKQYSYRLIANYIYDR 122
Query: 262 QLVHKLFKVLVPRFENSTVSYTKMIKAPKAQNTEHTNKIVLEL 390
+L + K +++ YTK+ PK++ + LEL
Sbjct: 123 ELALNVVKQAPIKYKERNGGYTKIKLLPKSRKGDAARMASLEL 165
>UniRef50_Q1MPP0 Cluster: 50S ribosomal protein L17; n=1; Lawsonia
intracellularis PHE/MN1-00|Rep: 50S ribosomal protein
L17 - Lawsonia intracellularis (strain PHE/MN1-00)
Length = 126
Score = 34.7 bits (76), Expect = 1.9
Identities = 26/89 (29%), Positives = 38/89 (42%)
Frame = +1
Query: 73 PXGRLXKLRKTVTGLIKFEXIXLNINRGDEARQYAERLISEAIRHGDCHKPTMDMANFWL 252
P R R LIK I + E R+ E LI+ A+R+ D H + +
Sbjct: 14 PSHRKALFRNMANELIKHGKICTTETKAKELRRIVEPLITLALRN-DLHSRRLAFQSMG- 71
Query: 253 LEKQLVHKLFKVLVPRFENSTVSYTKMIK 339
+ QLV LF + P F N YT++ +
Sbjct: 72 -DHQLVKHLFNNVAPAFVNVPGGYTRITR 99
>UniRef50_Q1IS92 Cluster: 50S ribosomal protein L17; n=2;
Acidobacteria|Rep: 50S ribosomal protein L17 -
Acidobacteria bacterium (strain Ellin345)
Length = 161
Score = 34.7 bits (76), Expect = 1.9
Identities = 23/86 (26%), Positives = 40/86 (46%)
Frame = +1
Query: 82 RLXKLRKTVTGLIKFEXIXLNINRGDEARQYAERLISEAIRHGDCHKPTMDMANFWLLEK 261
R LR VT LI E I + + R + E++I+ + G+ A +L+
Sbjct: 17 RRALLRNLVTSLIVEERIETTVPKAKAMRPHVEKMITLG-KQGNV--AARRQAAAYLMTS 73
Query: 262 QLVHKLFKVLVPRFENSTVSYTKMIK 339
+ V KLF + PRF + Y ++++
Sbjct: 74 EAVDKLFNTISPRFGDREGGYLRIVR 99
>UniRef50_Q97DW5 Cluster: Polyketide synthase pksE (Short-chain
alcohol dehydrogenase,acyl- carrier-protein
S-malonyltransferase,3-oxoacyl-(Acyl-carrier-protein)
synthase I domains); n=1; Clostridium acetobutylicum|Rep:
Polyketide synthase pksE (Short-chain alcohol
dehydrogenase,acyl- carrier-protein
S-malonyltransferase,3-oxoacyl-(Acyl-carrier-protein)
synthase I domains) - Clostridium acetobutylicum
Length = 1795
Score = 34.3 bits (75), Expect = 2.6
Identities = 16/82 (19%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Frame = +1
Query: 304 ENSTVSYTKMIKAPKAQNTEHTNKIVLE--LRGNPYPDLIVKQPNNRLWIQNVLLDAAKY 477
EN +++ +++ K +NT H+ +LE L + + ++ + ++N++ D K
Sbjct: 1676 ENIPLTFEHLLEEEKPKNTSHSKNTILENDLEEAAIEESMDEKSSVENRLKNIISDVTKI 1735
Query: 478 DYRQSKISEIAANIGKDTQLSS 543
D + K+ + +++G D+ +++
Sbjct: 1736 DASKIKVEDAISDLGIDSMMAN 1757
>UniRef50_Q23RC2 Cluster: Ser/Thr protein phosphatase family
protein; n=1; Tetrahymena thermophila SB210|Rep: Ser/Thr
protein phosphatase family protein - Tetrahymena
thermophila SB210
Length = 1170
Score = 34.3 bits (75), Expect = 2.6
Identities = 28/118 (23%), Positives = 59/118 (50%), Gaps = 1/118 (0%)
Frame = +1
Query: 238 ANFWLLEKQLVHKLFKVLVPRFENSTVSYTKM-IKAPKAQNTEHTNKIVLELRGNPYPDL 414
AN L+KQ ++ + K + +N + + ++ + QN+ + +I L+ N ++
Sbjct: 598 ANQQFLKKQSIYHIRKYNSKKNQNDLQNNQPIQLQQDELQNSINETQIDSPLQSNGNKNI 657
Query: 415 IVKQPNNRLWIQNVLLDAAKYDYRQSKISEIAANIGKDTQLSSSSLTANNKGGTQKEE 588
KQP N+ IQ V D+ ++S S+I+ NI ++++ S + A + T + +
Sbjct: 658 FFKQPQNKRTIQQVKNDSL---IQRSSSSKISFNIRRNSKSSVNLQYAKSNTSTPQNK 712
>UniRef50_A2DXX1 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 1176
Score = 34.3 bits (75), Expect = 2.6
Identities = 40/138 (28%), Positives = 64/138 (46%), Gaps = 4/138 (2%)
Frame = +1
Query: 91 KLRKTVTGLIKFEXIXLNINRGDEARQYAERLISEAIRHGDCHKPTMDMANFWL-LEKQL 267
KL + V + K E I N DE + I+E H P +D + L LE L
Sbjct: 722 KLDEVVPKIPKVESIAKKANSKDERSSF---FINEL--HNYFITPNIDFCSMMLKLEFPL 776
Query: 268 VHKLFKVLVPRFENSTVSYTKMIKAPKAQNTEHTNKIVLELRGNPYPDLIVKQPNNRL-- 441
+ F++L+ R NS Y+K+I+ PK ++ E + P+ + QP+N +
Sbjct: 777 DDQKFRILI-RLLNS---YSKLIETPKKKSKETPIEY-------PFKTKQLSQPSNEIIQ 825
Query: 442 WIQNVLL-DAAKYDYRQS 492
W+ VLL + K D R++
Sbjct: 826 WLSTVLLPNLLKSDNRKA 843
>UniRef50_Q11FN1 Cluster: Putative uncharacterized protein; n=1;
Mesorhizobium sp. BNC1|Rep: Putative uncharacterized
protein - Mesorhizobium sp. (strain BNC1)
Length = 690
Score = 33.9 bits (74), Expect = 3.4
Identities = 20/75 (26%), Positives = 31/75 (41%)
Frame = +1
Query: 241 NFWLLEKQLVHKLFKVLVPRFENSTVSYTKMIKAPKAQNTEHTNKIVLELRGNPYPDLIV 420
NFW +E V + ++ + + + + P+ + KIV E G P P L
Sbjct: 128 NFWQVE---VFAILSEIMENYPSGDGFFFNYLHVPRC-HCSRCQKIVFEATGKPVPALGT 183
Query: 421 KQPNNRLWIQNVLLD 465
+ P W QN L D
Sbjct: 184 RDPAYEQWRQNYLAD 198
>UniRef50_Q22AG9 Cluster: Putative uncharacterized protein; n=2;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 583
Score = 33.9 bits (74), Expect = 3.4
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Frame = +2
Query: 191 QKLSVMVTV-TNQLWTWPIFGFLKNSLFINYSKFWFQDLKTRQFLIQK*LKHLKLRILNI 367
Q LS+ T +NQ + +F +K+S + KF FQD + K ++LK+ ILNI
Sbjct: 115 QNLSIKATYCSNQERSLTVFKHIKHSKSLKNFKFSFQDKSKVYDGVFKYEENLKIMILNI 174
Query: 368 QIKLY*NCEVIHIQT*LSNNQIIDYGFKMY 457
L E+ + + N + ++ FK+Y
Sbjct: 175 TNILLDESEIQSLSLFIQNKKELE-SFKLY 203
>UniRef50_Q8D1Y7 Cluster: 50S ribosomal protein L17; n=1;
Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis|Rep: 50S ribosomal protein L17 -
Wigglesworthia glossinidia brevipalpis
Length = 122
Score = 33.5 bits (73), Expect = 4.5
Identities = 19/83 (22%), Positives = 40/83 (48%)
Frame = +1
Query: 94 LRKTVTGLIKFEXIXLNINRGDEARQYAERLISEAIRHGDCHKPTMDMANFWLLEKQLVH 273
L+ + LI++E I + + E R+ E LI+ + + ++ + + +++H
Sbjct: 21 LKNMIISLIRYEIIHTTLQKAKELRKILEPLITISKINSISNRRNIYSK---IRNNEIIH 77
Query: 274 KLFKVLVPRFENSTVSYTKMIKA 342
KLF + PRF Y ++K+
Sbjct: 78 KLFNDIGPRFLKKNGGYLSILKS 100
>UniRef50_Q98N32 Cluster: 50S ribosomal protein L17; n=37;
Proteobacteria|Rep: 50S ribosomal protein L17 -
Rhizobium loti (Mesorhizobium loti)
Length = 143
Score = 33.5 bits (73), Expect = 4.5
Identities = 20/76 (26%), Positives = 37/76 (48%)
Frame = +1
Query: 115 LIKFEXIXLNINRGDEARQYAERLISEAIRHGDCHKPTMDMANFWLLEKQLVHKLFKVLV 294
L++ E I + + + R E+L++ R GD H +A + +V +LF +
Sbjct: 28 LLEHEQIVTTLPKAKDLRPIVEKLVTLGKR-GDLHARRQVIAQIG--NEGVVKRLFDTIA 84
Query: 295 PRFENSTVSYTKMIKA 342
PR+ N Y +++KA
Sbjct: 85 PRYANRNGGYLRIMKA 100
>UniRef50_Q6CLM8 Cluster: Similar to sp|P22353 Saccharomyces
cerevisiae YJL063c MRPL8 ribosomal protein L17; n=1;
Kluyveromyces lactis|Rep: Similar to sp|P22353
Saccharomyces cerevisiae YJL063c MRPL8 ribosomal protein
L17 - Kluyveromyces lactis (Yeast) (Candida sphaerica)
Length = 246
Score = 33.1 bits (72), Expect = 5.9
Identities = 30/126 (23%), Positives = 60/126 (47%), Gaps = 8/126 (6%)
Frame = +1
Query: 94 LRKTVTGLIKFEXIXLNINRGDEARQYAERLISEA---IRHGDCHKPTMDMANFWLLE-- 258
+R T L++ I + E ++Y ER+I+ A I++G+ ++ + L
Sbjct: 20 IRNMATQLLQHGTISSTTPKLKETQRYVERIITIAKNGIQNGNPSSSVPELQSRLYLSGD 79
Query: 259 -KQLVHKLFKVLVPRFENSTVSYTKMIKAPKAQNTEHTNKIVLELRGNPY--PDLIVKQP 429
+L+ KLF + PR+ YT+++K + + + + +LEL P D + +
Sbjct: 80 NSKLLKKLFDEIAPRYTARNGGYTRVMKL-EPRLGDRAPQAILELVDAPVQNEDGQLLKG 138
Query: 430 NNRLWI 447
N +LW+
Sbjct: 139 NLKLWL 144
>UniRef50_Q552E6 Cluster: Putative uncharacterized protein; n=2;
Dictyostelium discoideum|Rep: Putative uncharacterized
protein - Dictyostelium discoideum AX4
Length = 714
Score = 32.7 bits (71), Expect = 7.8
Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Frame = +1
Query: 307 NSTVSYTKMIKAPKAQNTEHTNKIVLEL-RGNPYPDLIVKQPNNRLWIQNVLLDAAKYDY 483
NS +YT ++ NT TN G+ NN LW++ + LD K +
Sbjct: 259 NSFSNYTPIVSLSSINNTIATNSYNSPTGTGSGGSGGGSGSGNNNLWLEGLELDFLKNPH 318
Query: 484 RQSKISEIAANIGKDTQLSSSSLTANNKGGT 576
KI+E+ N Q+++++ NN GG+
Sbjct: 319 LPEKIAELINN-----QINNNNNNNNNSGGS 344
>UniRef50_Q2HB27 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 2238
Score = 32.7 bits (71), Expect = 7.8
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +1
Query: 424 QPNNRLWIQNVLLDAAKYDYRQSKISEIAANIGKDTQLSSSSLTANNKG 570
Q NN +WIQ ++ DY+ EIAA + ++SS A KG
Sbjct: 784 QDNNAVWIQEEVMKLRSPDYQPPTPEEIAAAFAEIATAAASSGAARGKG 832
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 518,980,908
Number of Sequences: 1657284
Number of extensions: 9518978
Number of successful extensions: 23757
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 23101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23745
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 48760335122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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