Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_D14
(814 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical pr... 29 4.0
L23647-8|AAK29993.1| 54|Caenorhabditis elegans Hypothetical pr... 29 4.0
L07144-2|AAK21439.1| 54|Caenorhabditis elegans Hypothetical pr... 29 4.0
DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein. 29 4.0
AL032626-10|CAA21531.1| 458|Caenorhabditis elegans Hypothetical... 29 5.2
AF039716-2|AAB96737.1| 462|Caenorhabditis elegans Hypothetical ... 29 5.2
AC024801-4|AAF59648.4| 485|Caenorhabditis elegans Hypothetical ... 29 5.2
U64837-2|AAB04836.3| 213|Caenorhabditis elegans Hypothetical pr... 28 9.1
AC084153-7|AAK84593.1| 451|Caenorhabditis elegans Hypothetical ... 28 9.1
>Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical
protein ZK520.3a protein.
Length = 1383
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 381 HINDAQNSTNQLIDFVCYKDGDRIALFIAEGG 476
++ DA N T +LID K+GD +A+ +A G
Sbjct: 66 NVIDALNPTGKLIDIAWDKEGDVLAIAVANTG 97
>Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical
protein ZK520.3a protein.
Length = 1383
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 381 HINDAQNSTNQLIDFVCYKDGDRIALFIAEGG 476
++ DA N T +LID K+GD +A+ +A G
Sbjct: 66 NVIDALNPTGKLIDIAWDKEGDVLAIAVANTG 97
>L23647-8|AAK29993.1| 54|Caenorhabditis elegans Hypothetical
protein ZC262.5 protein.
Length = 54
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +3
Query: 66 LITXFAAGVLADXFSQXTAVVTSQCTKNNAEDKVPEVEAALRT 194
++ AAG+ +SQ A V QCTK A K P +A L+T
Sbjct: 1 MVAWRAAGLNYVRYSQIAAQVVRQCTKGGANVKKP--QATLKT 41
>L07144-2|AAK21439.1| 54|Caenorhabditis elegans Hypothetical
protein R05D3.6 protein.
Length = 54
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +3
Query: 66 LITXFAAGVLADXFSQXTAVVTSQCTKNNAEDKVPEVEAALRT 194
++ AAG+ +SQ A V QCTK A K P +A L+T
Sbjct: 1 MVAWRAAGLNYVRYSQIAAQVVRQCTKGGANVKKP--QATLKT 41
>DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein.
Length = 1383
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 381 HINDAQNSTNQLIDFVCYKDGDRIALFIAEGG 476
++ DA N T +LID K+GD +A+ +A G
Sbjct: 66 NVIDALNPTGKLIDIAWDKEGDVLAIAVANTG 97
>AL032626-10|CAA21531.1| 458|Caenorhabditis elegans Hypothetical
protein Y37D8A.12a protein.
Length = 458
Score = 28.7 bits (61), Expect = 5.2
Identities = 24/81 (29%), Positives = 34/81 (41%)
Frame = +3
Query: 480 ECFQQKTENLKTCFLNLKQSFPTVESANNLSLVEKCAKVDEMTSCIVKSLEECSTPTPAN 659
E ++K L T NL P ++ A L + EK K T K TP +
Sbjct: 374 ESSKRKAPKLSTDLTNL---VPLLQQAQMLPVTEKATKEKLQTP---KQSPMPGTPENTS 427
Query: 660 MAESLIKFMRKDSPCHTALPK 722
+ SLIK +K+S A P+
Sbjct: 428 LPPSLIKKKKKESTSEQAAPE 448
>AF039716-2|AAB96737.1| 462|Caenorhabditis elegans Hypothetical
protein W03G9.3 protein.
Length = 462
Score = 28.7 bits (61), Expect = 5.2
Identities = 24/81 (29%), Positives = 34/81 (41%)
Frame = +3
Query: 480 ECFQQKTENLKTCFLNLKQSFPTVESANNLSLVEKCAKVDEMTSCIVKSLEECSTPTPAN 659
E ++K L T NL P ++ A L + EK K T K TP +
Sbjct: 378 ESSKRKAPKLSTDLTNL---VPLLQQAQMLPVTEKATKEKLQTP---KQSPMPGTPENTS 431
Query: 660 MAESLIKFMRKDSPCHTALPK 722
+ SLIK +K+S A P+
Sbjct: 432 LPPSLIKKKKKESTSEQAAPE 452
>AC024801-4|AAF59648.4| 485|Caenorhabditis elegans Hypothetical
protein Y50D7A.3a protein.
Length = 485
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = -2
Query: 657 LRVSVWNTLRGISR-YRRSSHQLLRIFQQGSSYWRIPQWGSSVSNLKSM 514
L V ++ L G + Y R +LR+ QQG +R QW + + K++
Sbjct: 226 LGVIMYTLLAGCAPFYHRKQLMMLRLIQQGKFEFRNEQWANITAEAKNL 274
>U64837-2|AAB04836.3| 213|Caenorhabditis elegans Hypothetical
protein T27E4.5 protein.
Length = 213
Score = 27.9 bits (59), Expect = 9.1
Identities = 16/58 (27%), Positives = 31/58 (53%)
Frame = +3
Query: 465 AEGGPECFQQKTENLKTCFLNLKQSFPTVESANNLSLVEKCAKVDEMTSCIVKSLEEC 638
A PE ++KTE KTC L+ ++ +++ V+ C K D+ C+ ++++C
Sbjct: 132 ANHSPE-IERKTEEFKTCPSQLQMAYFCQKTSTARKTVKPC-KTDQ--DCMFSNVQKC 185
>AC084153-7|AAK84593.1| 451|Caenorhabditis elegans Hypothetical
protein Y22D7AL.4 protein.
Length = 451
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +3
Query: 168 PEVEAALRTFGNCLKGLVDLNVLKTEIEEAKPN 266
PE E +RT G+ G++D+N + + A+PN
Sbjct: 64 PEFEVEIRTNGHIYAGILDINGAEPGDKGAEPN 96
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,852,629
Number of Sequences: 27780
Number of extensions: 367403
Number of successful extensions: 1054
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1005
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1054
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1998381620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -