Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_D13
(764 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of pr... 36 0.024
AC024696-9|AAK84508.1| 1900|Caenorhabditis elegans Hypothetical ... 36 0.024
AC024206-4|AAK67240.1| 564|Caenorhabditis elegans Hypothetical ... 32 0.51
AC024206-3|AAF36052.1| 561|Caenorhabditis elegans Hypothetical ... 32 0.51
Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical pr... 31 0.90
Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical pr... 31 0.90
Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical p... 31 0.90
U41543-4|AAM69116.1| 575|Caenorhabditis elegans Hypothetical pr... 31 1.2
U41543-3|AAB37024.1| 572|Caenorhabditis elegans Hypothetical pr... 31 1.2
AF039047-2|ABR92603.1| 403|Caenorhabditis elegans Serpentine re... 30 2.1
AF039047-1|AAB94224.2| 403|Caenorhabditis elegans Serpentine re... 30 2.1
Z73102-7|CAA97420.1| 727|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z92789-5|CAB07217.1| 397|Caenorhabditis elegans Hypothetical pr... 28 6.3
U61954-8|AAM98018.1| 1005|Caenorhabditis elegans Hypothetical pr... 28 6.3
U61954-7|AAK29803.1| 1140|Caenorhabditis elegans Hypothetical pr... 28 6.3
U27312-6|AAA68250.1| 512|Caenorhabditis elegans Hypothetical pr... 28 6.3
AC006807-5|AAK84619.1| 349|Caenorhabditis elegans Hypothetical ... 28 6.3
Z66562-4|CAA91465.1| 258|Caenorhabditis elegans Hypothetical pr... 28 8.4
>U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of
presynaptic morphologyprotein 1 protein.
Length = 3766
Score = 36.3 bits (80), Expect = 0.024
Identities = 34/122 (27%), Positives = 54/122 (44%), Gaps = 5/122 (4%)
Frame = +3
Query: 300 DGEDAIFKCNVMLGSEDNIFDLKIILPETDNFEY---VGPDSQTVENTIKFVAEDSDLET 470
DG+ +I + L S DNI +I+ +T+ F + VG D + + V E +
Sbjct: 885 DGDSSIIHSHTALLSSDNILKAQIVANKTNIFIFPREVGKDYIVIRRKLN-VFEHHASDY 943
Query: 471 KTIKTIWATYDEKNNNWH--PVRYEVKNYNELLGLLEKHEIWDYFNFNTGFDKSAFDVSQ 644
K T WAT + + W+ E+K Y ++ EK + D F+ T + F V
Sbjct: 944 KCWYTSWATDPKYDMLWYYNSAEMEIKGY-DIFKKSEK-SVGDAFDSLTFLAGAEFAVQV 1001
Query: 645 YD 650
YD
Sbjct: 1002 YD 1003
>AC024696-9|AAK84508.1| 1900|Caenorhabditis elegans Hypothetical
protein F07B7.12 protein.
Length = 1900
Score = 36.3 bits (80), Expect = 0.024
Identities = 34/122 (27%), Positives = 54/122 (44%), Gaps = 5/122 (4%)
Frame = +3
Query: 300 DGEDAIFKCNVMLGSEDNIFDLKIILPETDNFEY---VGPDSQTVENTIKFVAEDSDLET 470
DG+ +I + L S DNI +I+ +T+ F + VG D + + V E +
Sbjct: 885 DGDSSIIHSHTALLSSDNILKAQIVANKTNIFIFPREVGKDYIVIRRKLN-VFEHHASDY 943
Query: 471 KTIKTIWATYDEKNNNWH--PVRYEVKNYNELLGLLEKHEIWDYFNFNTGFDKSAFDVSQ 644
K T WAT + + W+ E+K Y ++ EK + D F+ T + F V
Sbjct: 944 KCWYTSWATDPKYDMLWYYNSAEMEIKGY-DIFKKSEK-SVGDAFDSLTFLAGAEFAVQV 1001
Query: 645 YD 650
YD
Sbjct: 1002 YD 1003
>AC024206-4|AAK67240.1| 564|Caenorhabditis elegans Hypothetical
protein Y74C9A.4b protein.
Length = 564
Score = 31.9 bits (69), Expect = 0.51
Identities = 24/80 (30%), Positives = 37/80 (46%)
Frame = +3
Query: 279 EIHPETDDGEDAIFKCNVMLGSEDNIFDLKIILPETDNFEYVGPDSQTVENTIKFVAEDS 458
++ E D+ E+A + + G+ D F L DN +VG + Q + I+ AE
Sbjct: 74 DLEDEEDEDEEAEAREHHESGAHDTSFSNP--LSNVDNLIHVGTEYQAI---IQPTAEQL 128
Query: 459 DLETKTIKTIWATYDEKNNN 518
+ E + IWA DE N N
Sbjct: 129 EKEPCRDQQIWAFPDEMNEN 148
>AC024206-3|AAF36052.1| 561|Caenorhabditis elegans Hypothetical
protein Y74C9A.4a protein.
Length = 561
Score = 31.9 bits (69), Expect = 0.51
Identities = 24/80 (30%), Positives = 37/80 (46%)
Frame = +3
Query: 279 EIHPETDDGEDAIFKCNVMLGSEDNIFDLKIILPETDNFEYVGPDSQTVENTIKFVAEDS 458
++ E D+ E+A + + G+ D F L DN +VG + Q + I+ AE
Sbjct: 71 DLEDEEDEDEEAEAREHHESGAHDTSFSNP--LSNVDNLIHVGTEYQAI---IQPTAEQL 125
Query: 459 DLETKTIKTIWATYDEKNNN 518
+ E + IWA DE N N
Sbjct: 126 EKEPCRDQQIWAFPDEMNEN 145
>Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical protein
F25F2.2 protein.
Length = 4307
Score = 31.1 bits (67), Expect = 0.90
Identities = 23/109 (21%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Frame = +3
Query: 141 MSISAGNVQDYSVWKTNHSSRVD---YNKGAVKSIIVDENAKYRYGVSYEIHPETDDGED 311
+ + N++ ++ + N + D Y G VDE+ ++ + D GE+
Sbjct: 1455 VQVQQANMKSFATFSVNINDENDNSPYFVGHTAFAFVDESDTVDDVLATVTAFDKDRGEN 1514
Query: 312 AIFKCNVMLGSEDNIFDLKIILPETDNFEYVGPDSQTVENTIKFVAEDS 458
I +++ G+E+++F + E + + P+ Q VE+ ++ A DS
Sbjct: 1515 GIVTYSIVSGNEESLFKIDAKSGEVRLAKPLDPELQHVESILRIRAIDS 1563
>Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical protein
F25F2.2 protein.
Length = 4307
Score = 31.1 bits (67), Expect = 0.90
Identities = 23/109 (21%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Frame = +3
Query: 141 MSISAGNVQDYSVWKTNHSSRVD---YNKGAVKSIIVDENAKYRYGVSYEIHPETDDGED 311
+ + N++ ++ + N + D Y G VDE+ ++ + D GE+
Sbjct: 1455 VQVQQANMKSFATFSVNINDENDNSPYFVGHTAFAFVDESDTVDDVLATVTAFDKDRGEN 1514
Query: 312 AIFKCNVMLGSEDNIFDLKIILPETDNFEYVGPDSQTVENTIKFVAEDS 458
I +++ G+E+++F + E + + P+ Q VE+ ++ A DS
Sbjct: 1515 GIVTYSIVSGNEESLFKIDAKSGEVRLAKPLDPELQHVESILRIRAIDS 1563
>Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical
protein F25F2.2 protein.
Length = 4307
Score = 31.1 bits (67), Expect = 0.90
Identities = 23/109 (21%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Frame = +3
Query: 141 MSISAGNVQDYSVWKTNHSSRVD---YNKGAVKSIIVDENAKYRYGVSYEIHPETDDGED 311
+ + N++ ++ + N + D Y G VDE+ ++ + D GE+
Sbjct: 1455 VQVQQANMKSFATFSVNINDENDNSPYFVGHTAFAFVDESDTVDDVLATVTAFDKDRGEN 1514
Query: 312 AIFKCNVMLGSEDNIFDLKIILPETDNFEYVGPDSQTVENTIKFVAEDS 458
I +++ G+E+++F + E + + P+ Q VE+ ++ A DS
Sbjct: 1515 GIVTYSIVSGNEESLFKIDAKSGEVRLAKPLDPELQHVESILRIRAIDS 1563
>U41543-4|AAM69116.1| 575|Caenorhabditis elegans Hypothetical
protein F46H5.7b protein.
Length = 575
Score = 30.7 bits (66), Expect = 1.2
Identities = 29/117 (24%), Positives = 52/117 (44%)
Frame = +3
Query: 360 DLKIILPETDNFEYVGPDSQTVENTIKFVAEDSDLETKTIKTIWATYDEKNNNWHPVRYE 539
DL + N E +Q+ ++ KFV DS+++ K + +DE+ NN H V E
Sbjct: 193 DLSAAQLKVKNLEKKLESAQSADSEEKFVRIDSEIDEKRSQ----DHDEEINNLHNVIEE 248
Query: 540 VKNYNELLGLLEKHEIWDYFNFNTGFDKSAFDVSQYDCDDENVEEHTLQSETVTKFL 710
++N + K ++ F+ N + K+A D + + N + H T + L
Sbjct: 249 LRNKLATVESKNK-DLETKFSENQDYLKNAKDKVTFLENQLNSDAHEEVKSTAVRAL 304
>U41543-3|AAB37024.1| 572|Caenorhabditis elegans Hypothetical
protein F46H5.7a protein.
Length = 572
Score = 30.7 bits (66), Expect = 1.2
Identities = 29/117 (24%), Positives = 52/117 (44%)
Frame = +3
Query: 360 DLKIILPETDNFEYVGPDSQTVENTIKFVAEDSDLETKTIKTIWATYDEKNNNWHPVRYE 539
DL + N E +Q+ ++ KFV DS+++ K + +DE+ NN H V E
Sbjct: 193 DLSAAQLKVKNLEKKLESAQSADSEEKFVRIDSEIDEKRSQ----DHDEEINNLHNVIEE 248
Query: 540 VKNYNELLGLLEKHEIWDYFNFNTGFDKSAFDVSQYDCDDENVEEHTLQSETVTKFL 710
++N + K ++ F+ N + K+A D + + N + H T + L
Sbjct: 249 LRNKLATVESKNK-DLETKFSENQDYLKNAKDKVTFLENQLNSDAHEEVKSTAVRAL 304
>AF039047-2|ABR92603.1| 403|Caenorhabditis elegans Serpentine
receptor, class r protein4, isoform b protein.
Length = 403
Score = 29.9 bits (64), Expect = 2.1
Identities = 21/78 (26%), Positives = 39/78 (50%)
Frame = +3
Query: 345 EDNIFDLKIILPETDNFEYVGPDSQTVENTIKFVAEDSDLETKTIKTIWATYDEKNNNWH 524
+D I IL E+++FE ++Q V T + + D L+++T + + +NN +
Sbjct: 318 QDQIVATSKILMESEDFE--NAENQKVYQTYRLMV-DRSLKSETRIFVVNAFGINSNNLN 374
Query: 525 PVRYEVKNYNELLGLLEK 578
+ + N LL +LEK
Sbjct: 375 IAMFVIPNLGPLLMMLEK 392
>AF039047-1|AAB94224.2| 403|Caenorhabditis elegans Serpentine
receptor, class r protein4, isoform a protein.
Length = 403
Score = 29.9 bits (64), Expect = 2.1
Identities = 21/78 (26%), Positives = 39/78 (50%)
Frame = +3
Query: 345 EDNIFDLKIILPETDNFEYVGPDSQTVENTIKFVAEDSDLETKTIKTIWATYDEKNNNWH 524
+D I IL E+++FE ++Q V T + + D L+++T + + +NN +
Sbjct: 318 QDQIVATSKILMESEDFE--NAENQKVYQTYRLMV-DRSLKSETRIFVVNAFGINSNNLN 374
Query: 525 PVRYEVKNYNELLGLLEK 578
+ + N LL +LEK
Sbjct: 375 IAMFVIPNLGPLLMMLEK 392
>Z73102-7|CAA97420.1| 727|Caenorhabditis elegans Hypothetical
protein B0035.6 protein.
Length = 727
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 6/52 (11%)
Frame = +3
Query: 615 FDKSAFDVSQYDCDDENVEEH------TLQSETVTKFLMFMDPENDKHVDHV 752
FD+ FD+ + + D+++ E TL SE+ K + +D ++D VD++
Sbjct: 409 FDERTFDIEESETVDQSINEEDEERCSTLSSESSVKTAISIDHKSDTAVDNL 460
>Z92789-5|CAB07217.1| 397|Caenorhabditis elegans Hypothetical
protein H02I12.3 protein.
Length = 397
Score = 28.3 bits (60), Expect = 6.3
Identities = 25/89 (28%), Positives = 40/89 (44%)
Frame = -2
Query: 568 SPNSSL*FLTSYLTGCQLLFFSS*VAQIVFIVLVSKSLSSATNLIVFSTVCESGPTYSKL 389
S NS SY T ++ + +++ + SLS ++ F VCE G
Sbjct: 264 SKNSKTPASRSYSTRSTNVYSKLKLVWTTLLIVSTFSLSWGLCVLYFVIVCEEGCMLIYN 323
Query: 388 SVSGKIIFKSNILSSDPSITLHLKIASSP 302
G ++ S LSS +I + LK+AS+P
Sbjct: 324 ENIG--LYLSLFLSSSVNILVMLKLASNP 350
>U61954-8|AAM98018.1| 1005|Caenorhabditis elegans Hypothetical
protein F41H10.3b protein.
Length = 1005
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = +3
Query: 504 EKNNNWHPVRYEVKNYNELL-GLLEKHEIWDYFNFNTGFDK 623
E N W P RY V YN ++ L K E+W FDK
Sbjct: 384 ESNGKWVPRRYLVDIYNHIMFPLFVKWELWP-STLKWAFDK 423
>U61954-7|AAK29803.1| 1140|Caenorhabditis elegans Hypothetical
protein F41H10.3a protein.
Length = 1140
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = +3
Query: 504 EKNNNWHPVRYEVKNYNELL-GLLEKHEIWDYFNFNTGFDK 623
E N W P RY V YN ++ L K E+W FDK
Sbjct: 384 ESNGKWVPRRYLVDIYNHIMFPLFVKWELWP-STLKWAFDK 423
>U27312-6|AAA68250.1| 512|Caenorhabditis elegans Hypothetical
protein F26A1.3 protein.
Length = 512
Score = 28.3 bits (60), Expect = 6.3
Identities = 25/93 (26%), Positives = 40/93 (43%)
Frame = +3
Query: 240 VDENAKYRYGVSYEIHPETDDGEDAIFKCNVMLGSEDNIFDLKIILPETDNFEYVGPDSQ 419
+ +N+++ G I+ +TDD ED KC +L D+ I T N + PD +
Sbjct: 129 LQDNSQFLLGTVSNINDQTDDDEDENMKCASVLMLYDHGRFGNI---HTINVRCM-PDDE 184
Query: 420 TVENTIKFVAEDSDLETKTIKTIWATYDEKNNN 518
T E+ K +TK ++ I N N
Sbjct: 185 TNEDEEKDKDNSKSKKTKEVQQILKVGRRMNAN 217
>AC006807-5|AAK84619.1| 349|Caenorhabditis elegans Hypothetical
protein Y58A7A.5 protein.
Length = 349
Score = 28.3 bits (60), Expect = 6.3
Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 7/98 (7%)
Frame = +3
Query: 126 FEAVRMSISAGNVQDYSVW--KTNHSSRVDYNKG-AVKSIIVDENAKYRYGVSYEIHPET 296
FE S+ QDYS + K+ S+ K A++S VDEN K + VSY I+ +T
Sbjct: 207 FEIRSAKTSSARGQDYSNFLSKSREFSKKSNAKVMALRSEKVDENVKSQPTVSYNIY-KT 265
Query: 297 DDGEDAI----FKCNVMLGSEDNIFDLKIILPETDNFE 398
+D + FK V+ S + + K+ + D+ +
Sbjct: 266 HRSQDVVGKEMFKAKVVSKSRRHRPNKKVDMENYDDLD 303
>Z66562-4|CAA91465.1| 258|Caenorhabditis elegans Hypothetical
protein F42E11.3 protein.
Length = 258
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = -1
Query: 362 VEYIIFRSKHYITLENRIFTIVSFWVDLI*DSVSVFCVFIYDNTFHSSFVV 210
V+ +FR HY+ L +++F + + LI V FI ++TF + F++
Sbjct: 15 VDLNVFRKIHYLELLSQMFGFLFYTFYLIIFLVHGKTFFISEHTFKAIFII 65
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,951,854
Number of Sequences: 27780
Number of extensions: 358342
Number of successful extensions: 1082
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1037
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1082
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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