Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_D12
(465 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P08570 Cluster: 60S acidic ribosomal protein P1; n=15; ... 84 1e-15
UniRef50_Q16FG5 Cluster: Acidic ribosomal protein P1, putative; ... 64 1e-09
UniRef50_Q17FT7 Cluster: Acidic ribosomal protein P1, putative; ... 61 1e-08
UniRef50_Q16VR0 Cluster: Putative uncharacterized protein; n=1; ... 61 1e-08
UniRef50_P05386 Cluster: 60S acidic ribosomal protein P1; n=156;... 59 4e-08
UniRef50_Q9FLV1 Cluster: 60s acidic ribosomal protein P1; n=1; A... 50 2e-05
UniRef50_Q5DBA6 Cluster: SJCHGC09468 protein; n=1; Schistosoma j... 46 3e-04
UniRef50_P50344 Cluster: 60S acidic ribosomal protein P1; n=14; ... 46 4e-04
UniRef50_Q5CJB8 Cluster: Acidic ribosomal protein P1; n=3; Eimer... 42 0.007
UniRef50_UPI0000F2B32D Cluster: PREDICTED: hypothetical protein;... 40 0.035
UniRef50_UPI0000499C26 Cluster: 60S acidic ribosomal protein P1;... 40 0.035
UniRef50_Q7R476 Cluster: GLP_480_102976_103332; n=1; Giardia lam... 40 0.035
UniRef50_Q0UPB2 Cluster: Putative uncharacterized protein; n=1; ... 39 0.062
UniRef50_Q7R992 Cluster: Acidic ribosomal protein P1-hydromedusa... 36 0.57
UniRef50_Q4N3J3 Cluster: 60S acidic ribosomal protein P1, putati... 36 0.57
UniRef50_A0DBJ7 Cluster: Chromosome undetermined scaffold_44, wh... 34 1.3
UniRef50_P10622 Cluster: 60S acidic ribosomal protein P1-beta; n... 33 3.1
UniRef50_Q7XBP6 Cluster: Ubiquitin/ribosomal protein P1 fusion; ... 33 4.1
>UniRef50_P08570 Cluster: 60S acidic ribosomal protein P1; n=15;
Eukaryota|Rep: 60S acidic ribosomal protein P1 -
Drosophila melanogaster (Fruit fly)
Length = 112
Score = 84.2 bits (199), Expect = 1e-15
Identities = 42/67 (62%), Positives = 45/67 (67%)
Frame = +2
Query: 68 MVSKAXFACXXXXXXXXXXXXXXTGXXISTILKAAAVXVXPYWPGLFAKALEGINVRDLI 247
M +KA AC TG I+TILKAA V V PYWPGLFAKALEGINV+DLI
Sbjct: 1 MSTKAELACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLI 60
Query: 248 TNIGSGV 268
TNIGSGV
Sbjct: 61 TNIGSGV 67
>UniRef50_Q16FG5 Cluster: Acidic ribosomal protein P1, putative;
n=2; Aedes aegypti|Rep: Acidic ribosomal protein P1,
putative - Aedes aegypti (Yellowfever mosquito)
Length = 106
Score = 64.5 bits (150), Expect = 1e-09
Identities = 34/63 (53%), Positives = 37/63 (58%)
Frame = +2
Query: 80 AXFACXXXXXXXXXXXXXXTGXXISTILKAAAVXVXPYWPGLFAKALEGINVRDLITNIG 259
A +C T ISTI A V + PYWPGLF KALEGINV+DLITNIG
Sbjct: 15 AIASCAYSALILFDDDVAVTDEKISTI--QANVDIEPYWPGLFTKALEGINVKDLITNIG 72
Query: 260 SGV 268
SGV
Sbjct: 73 SGV 75
>UniRef50_Q17FT7 Cluster: Acidic ribosomal protein P1, putative;
n=1; Aedes aegypti|Rep: Acidic ribosomal protein P1,
putative - Aedes aegypti (Yellowfever mosquito)
Length = 88
Score = 61.3 bits (142), Expect = 1e-08
Identities = 27/33 (81%), Positives = 29/33 (87%)
Frame = +2
Query: 170 AAVXVXPYWPGLFAKALEGINVRDLITNIGSGV 268
A V + PYWP LFAKALEGINV+DLITNIGSGV
Sbjct: 6 ANVDIEPYWPALFAKALEGINVKDLITNIGSGV 38
>UniRef50_Q16VR0 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 88
Score = 60.9 bits (141), Expect = 1e-08
Identities = 32/42 (76%), Positives = 33/42 (78%)
Frame = +2
Query: 137 TGXXISTILKAAAVXVXPYWPGLFAKALEGINVRDLITNIGS 262
T ISTILKAA V PYW LFAKALEGINV+DLITNIGS
Sbjct: 49 TDEKISTILKAA--NVEPYWRALFAKALEGINVKDLITNIGS 88
>UniRef50_P05386 Cluster: 60S acidic ribosomal protein P1; n=156;
Eukaryota|Rep: 60S acidic ribosomal protein P1 - Homo
sapiens (Human)
Length = 114
Score = 59.3 bits (137), Expect = 4e-08
Identities = 27/66 (40%), Positives = 36/66 (54%)
Frame = +2
Query: 68 MVSKAXFACXXXXXXXXXXXXXXTGXXISTILKAAAVXVXPYWPGLFAKALEGINVRDLI 247
M S + AC T I+ ++KAA V V P+WPGLFAKAL +N+ LI
Sbjct: 1 MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI 60
Query: 248 TNIGSG 265
N+G+G
Sbjct: 61 CNVGAG 66
>UniRef50_Q9FLV1 Cluster: 60s acidic ribosomal protein P1; n=1;
Arabidopsis thaliana|Rep: 60s acidic ribosomal protein
P1 - Arabidopsis thaliana (Mouse-ear cress)
Length = 111
Score = 50.4 bits (115), Expect = 2e-05
Identities = 25/65 (38%), Positives = 32/65 (49%)
Frame = +2
Query: 71 VSKAXFACXXXXXXXXXXXXXXTGXXISTILKAAAVXVXPYWPGLFAKALEGINVRDLIT 250
+S + AC T IS ++K A V V YWP LFAK E N+ DLI
Sbjct: 1 MSTSELACTYAALILHDDGIEITAENISKLVKTANVNVESYWPSLFAKLCEKKNIDDLIM 60
Query: 251 NIGSG 265
N+G+G
Sbjct: 61 NVGAG 65
>UniRef50_Q5DBA6 Cluster: SJCHGC09468 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09468 protein - Schistosoma
japonicum (Blood fluke)
Length = 116
Score = 46.4 bits (105), Expect = 3e-04
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +2
Query: 71 VSKAXFACXXXXXXXXXXXXXXTGXXISTILKAAAVX-VXPYWPGLFAKALEGINVRDLI 247
+SK+ AC T I+TILKAA + V Y P LFA +L G NV+DL+
Sbjct: 1 MSKSELACVYAALMLADDDIDVTADKINTILKAANIKFVESYLPNLFATSLNGKNVKDLL 60
Query: 248 TNIGS 262
++GS
Sbjct: 61 MSMGS 65
>UniRef50_P50344 Cluster: 60S acidic ribosomal protein P1; n=14;
Dikarya|Rep: 60S acidic ribosomal protein P1 -
Cladosporium herbarum (Davidiella tassiana)
Length = 110
Score = 46.0 bits (104), Expect = 4e-04
Identities = 21/44 (47%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Frame = +2
Query: 137 TGXXISTILKAAAV-XVXPYWPGLFAKALEGINVRDLITNIGSG 265
T + ++ AA V + P W LFAKALEG +V+DL+ N+GSG
Sbjct: 23 TADKLQALISAAKVPEIEPIWTSLFAKALEGKDVKDLLLNVGSG 66
>UniRef50_Q5CJB8 Cluster: Acidic ribosomal protein P1; n=3;
Eimeriorina|Rep: Acidic ribosomal protein P1 -
Cryptosporidium hominis
Length = 124
Score = 41.9 bits (94), Expect = 0.007
Identities = 19/42 (45%), Positives = 25/42 (59%)
Frame = +2
Query: 137 TGXXISTILKAAAVXVXPYWPGLFAKALEGINVRDLITNIGS 262
T I I+ AA V PY+PGLFA+AL NV D++ G+
Sbjct: 34 TSENIKKIISAAGGSVEPYFPGLFAQALSTTNVSDIVAGCGA 75
>UniRef50_UPI0000F2B32D Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 103
Score = 39.5 bits (88), Expect = 0.035
Identities = 15/27 (55%), Positives = 21/27 (77%)
Frame = +2
Query: 149 ISTILKAAAVXVXPYWPGLFAKALEGI 229
I+T +KAA + V P+WPGLFAK+L +
Sbjct: 41 INTPIKAAGINVEPFWPGLFAKSLNNV 67
>UniRef50_UPI0000499C26 Cluster: 60S acidic ribosomal protein P1;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: 60S acidic
ribosomal protein P1 - Entamoeba histolytica HM-1:IMSS
Length = 106
Score = 39.5 bits (88), Expect = 0.035
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = +2
Query: 137 TGXXISTILKAAAVXVXPYWPGLFAKALEGINVRDLITNIGS 262
T I+T+L A + V +WP + AKAL N+ DLI + GS
Sbjct: 27 TAEHINTVLHHANIKVEGFWPIIMAKALTNANIEDLIMDAGS 68
>UniRef50_Q7R476 Cluster: GLP_480_102976_103332; n=1; Giardia
lamblia ATCC 50803|Rep: GLP_480_102976_103332 - Giardia
lamblia ATCC 50803
Length = 118
Score = 39.5 bits (88), Expect = 0.035
Identities = 21/58 (36%), Positives = 27/58 (46%)
Frame = +2
Query: 89 ACXXXXXXXXXXXXXXTGXXISTILKAAAVXVXPYWPGLFAKALEGINVRDLITNIGS 262
AC T + +I AA V V W LFA LEG NV++L+T +GS
Sbjct: 7 ACVLAAIILADENQEPTAANLKSICDAAGVKVDSIWFTLFANYLEGKNVKELLTTLGS 64
>UniRef50_Q0UPB2 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 114
Score = 38.7 bits (86), Expect = 0.062
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +2
Query: 137 TGXXISTILKAAAVX-VXPYWPGLFAKALEGINVRDLITNIGS 262
T + +L AA + V P W LFAKALEG +V+D++T + S
Sbjct: 24 TPEKLQVLLIAAGIEDVEPIWTTLFAKALEGKDVKDILTEVAS 66
>UniRef50_Q7R992 Cluster: Acidic ribosomal protein P1-hydromedusa;
n=5; Plasmodium|Rep: Acidic ribosomal protein
P1-hydromedusa - Plasmodium yoelii yoelii
Length = 119
Score = 35.5 bits (78), Expect = 0.57
Identities = 19/70 (27%), Positives = 30/70 (42%)
Frame = +2
Query: 56 SKLKMVSKAXFACXXXXXXXXXXXXXXTGXXISTILKAAAVXVXPYWPGLFAKALEGINV 235
++L K C T I ++K + V PY P LF KAL+G ++
Sbjct: 7 AELPECEKQELLCTYAALILHEEKMSITNENIVKLIKKSNNTVLPYLPMLFEKALKGKDI 66
Query: 236 RDLITNIGSG 265
L++N+ G
Sbjct: 67 EGLLSNLSVG 76
>UniRef50_Q4N3J3 Cluster: 60S acidic ribosomal protein P1, putative;
n=2; Theileria|Rep: 60S acidic ribosomal protein P1,
putative - Theileria parva
Length = 117
Score = 35.5 bits (78), Expect = 0.57
Identities = 20/70 (28%), Positives = 33/70 (47%)
Frame = +2
Query: 56 SKLKMVSKAXFACXXXXXXXXXXXXXXTGXXISTILKAAAVXVXPYWPGLFAKALEGINV 235
S+L + C T I ++KAA + P+ P LFA+AL+G ++
Sbjct: 7 SELTKEQREELMCVYSSLVLYDDGLDVTQDNILKLVKAAKGDMQPFTPMLFARALKGKDL 66
Query: 236 RDLITNIGSG 265
L++ +GSG
Sbjct: 67 GSLLSAVGSG 76
>UniRef50_A0DBJ7 Cluster: Chromosome undetermined scaffold_44, whole
genome shotgun sequence; n=8; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_44,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 122
Score = 34.3 bits (75), Expect = 1.3
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +2
Query: 89 ACXXXXXXXXXXXXXXTGXXISTILKAAAVXVXPYWPGLFAKALEGINVRDLI-TNIGS 262
AC ++ I+KAA + V P W +F KAL+G V DL+ N GS
Sbjct: 20 ACTYAALILYEDNQEINAAKLAQIIKAANLRVEPIWTKVFEKALKGKKVGDLLHGNSGS 78
>UniRef50_P10622 Cluster: 60S acidic ribosomal protein P1-beta;
n=21; Ascomycota|Rep: 60S acidic ribosomal protein
P1-beta - Saccharomyces cerevisiae (Baker's yeast)
Length = 106
Score = 33.1 bits (72), Expect = 3.1
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +2
Query: 137 TGXXISTILKAAAVXVXPYWPGLFAKALEGINVRDLIT 250
T + TI KAA V W ++AKALEG +++++++
Sbjct: 21 TSDNLLTITKAAGANVDNVWADVYAKALEGKDLKEILS 58
>UniRef50_Q7XBP6 Cluster: Ubiquitin/ribosomal protein P1 fusion;
n=3; Chlorarachniophyceae|Rep: Ubiquitin/ribosomal
protein P1 fusion - Bigelowiella natans (Pedinomonas
minutissima) (Chlorarachnion sp.(strain CCMP 621))
Length = 221
Score = 32.7 bits (71), Expect = 4.1
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +2
Query: 137 TGXXISTILKAAAVXVXPYWPGLFAKALEG 226
T I+ +L A+ + V PYWP +FA+ ++G
Sbjct: 139 TEENINKLLSASKIEVAPYWPKMFAEIVKG 168
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 235,461,096
Number of Sequences: 1657284
Number of extensions: 2969926
Number of successful extensions: 6038
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 5979
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6037
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 25191138900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -