Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_D09
         (504 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0400 + 3017898-3017980,3018785-3018869,3019686-3019775,301...    37   0.008
02_04_0138 - 20144653-20144685,20144992-20145081,20145405-201454...    33   0.13 

>11_01_0400 +
           3017898-3017980,3018785-3018869,3019686-3019775,
           3019896-3019928
          Length = 96

 Score = 37.1 bits (82), Expect = 0.008
 Identities = 20/65 (30%), Positives = 29/65 (44%)
 Frame = +1

Query: 91  VXPQQSLRXACSQKPDAQNMWAKYQXCNDRVNSRSKTAETCEEELIDYVHVLDKCVTKDL 270
           V P++ L   C  KP       +Y+ C  RV       + C  +  DY   +DKCV   L
Sbjct: 34  VDPKKYLEERC--KPQCVKPLYEYEKCVKRVEKDDTGHKHCTGQYFDYWSCIDKCVAPKL 91

Query: 271 FKRLK 285
            ++LK
Sbjct: 92  LEKLK 96


>02_04_0138 -
           20144653-20144685,20144992-20145081,20145405-20145489,
           20146859-20146922,20149388-20149628
          Length = 170

 Score = 33.1 bits (72), Expect = 0.13
 Identities = 15/45 (33%), Positives = 21/45 (46%)
 Frame = +1

Query: 151 WAKYQXCNDRVNSRSKTAETCEEELIDYVHVLDKCVTKDLFKRLK 285
           W +YQ C  R+       + C  +  DY   +DK V + LF  LK
Sbjct: 126 WYEYQKCVKRIEDDETGQKHCTGQYFDYWKCVDKNVAEKLFDSLK 170


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,563,819
Number of Sequences: 37544
Number of extensions: 149103
Number of successful extensions: 236
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 235
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 236
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1071221400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)