Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_D06
(617 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_57744| Best HMM Match : LIM (HMM E-Value=4.3e-15) 86 2e-17
SB_2694| Best HMM Match : LIM (HMM E-Value=6.6e-14) 68 5e-12
SB_59654| Best HMM Match : LIM (HMM E-Value=0.0026) 60 2e-09
SB_57743| Best HMM Match : LIM (HMM E-Value=1.7e-08) 57 1e-08
SB_40829| Best HMM Match : LIM (HMM E-Value=1.7e-14) 46 2e-05
SB_38221| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_22219| Best HMM Match : LIM (HMM E-Value=8.2e-22) 42 3e-04
SB_1883| Best HMM Match : LIM (HMM E-Value=2.20004e-42) 42 3e-04
SB_40925| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_30891| Best HMM Match : LIM (HMM E-Value=4.40008e-43) 38 0.005
SB_26948| Best HMM Match : LIM (HMM E-Value=2.3e-39) 38 0.009
SB_20358| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.011
SB_29553| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.015
SB_9083| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.020
SB_26945| Best HMM Match : PET (HMM E-Value=7.4e-34) 36 0.035
SB_30367| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.046
SB_15482| Best HMM Match : LIM (HMM E-Value=0) 34 0.080
SB_13716| Best HMM Match : LIM (HMM E-Value=0) 34 0.11
SB_26947| Best HMM Match : LIM (HMM E-Value=6.2e-32) 33 0.14
SB_2217| Best HMM Match : LIM (HMM E-Value=1.2e-40) 33 0.14
SB_5864| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.25
SB_177| Best HMM Match : SBP_bac_3 (HMM E-Value=0.032) 31 0.99
SB_34203| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_20426| Best HMM Match : LIM (HMM E-Value=3e-35) 30 1.7
SB_20707| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_59568| Best HMM Match : TPP_enzyme_C (HMM E-Value=3.6e-34) 29 4.0
SB_20996| Best HMM Match : LIM (HMM E-Value=9e-22) 29 4.0
SB_57162| Best HMM Match : DUF1086 (HMM E-Value=3.4) 28 5.3
SB_34962| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_22733| Best HMM Match : Ribosomal_S27 (HMM E-Value=9.8) 28 5.3
SB_9634| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 5.3
SB_12399| Best HMM Match : DUF885 (HMM E-Value=2.3e-08) 28 5.3
SB_43770| Best HMM Match : PET (HMM E-Value=8.8e-24) 28 7.0
SB_16305| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_4754| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_40368| Best HMM Match : SASP_gamma (HMM E-Value=2.3) 28 7.0
>SB_57744| Best HMM Match : LIM (HMM E-Value=4.3e-15)
Length = 85
Score = 86.2 bits (204), Expect = 2e-17
Identities = 33/58 (56%), Positives = 42/58 (72%)
Frame = +3
Query: 144 KCPKCGKSVYAAEERVAGGLKWHKMCFKCGLCQKLLDSTNCSEHEGELYCKVCHARKF 317
KCP+C K+VY AEER+A G KWHK C C C K LDSTN ++ +GE+YCK C+ + F
Sbjct: 9 KCPRCSKTVYKAEERLAIGKKWHKSCLTCKCCNKSLDSTNLADKDGEIYCKGCYGKNF 66
>SB_2694| Best HMM Match : LIM (HMM E-Value=6.6e-14)
Length = 446
Score = 68.1 bits (159), Expect = 5e-12
Identities = 30/62 (48%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Frame = +3
Query: 132 ADN-PKCPKCGKSVYAAEERVAGGLKWHKMCFKCGLCQKLLDSTNCSEHEGELYCKVCHA 308
ADN PKCP+CG +VY AEE K+HK CF C C+K LDSTN + H+G+ + +
Sbjct: 38 ADNMPKCPRCGDNVYHAEEVSMENHKFHKKCFSCKDCRKKLDSTNAASHDGKCHTTIVTQ 97
Query: 309 RK 314
R+
Sbjct: 98 RR 99
Score = 58.4 bits (135), Expect = 4e-09
Identities = 22/44 (50%), Positives = 27/44 (61%)
Frame = +3
Query: 147 CPKCGKSVYAAEERVAGGLKWHKMCFKCGLCQKLLDSTNCSEHE 278
CP+C K YAAE+ + G WHK CF C C K LDST + H+
Sbjct: 218 CPRCEKRAYAAEQVLGAGFNWHKSCFNCYKCHKKLDSTTVAVHK 261
Score = 50.8 bits (116), Expect = 9e-07
Identities = 22/48 (45%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +3
Query: 144 KCPKCGKSVYAAEERVAGGLKWHKMCFKCG--LCQKLLDSTNCSEHEG 281
+C +C K Y AE G +WHK CF C C+K L+STNC E G
Sbjct: 296 RCGRCDKMCYHAEGISMAGKRWHKSCFACAEVRCRKKLESTNCCEGNG 343
>SB_59654| Best HMM Match : LIM (HMM E-Value=0.0026)
Length = 56
Score = 59.7 bits (138), Expect = 2e-09
Identities = 25/52 (48%), Positives = 32/52 (61%)
Frame = +3
Query: 117 MPFKPADNPKCPKCGKSVYAAEERVAGGLKWHKMCFKCGLCQKLLDSTNCSE 272
M K PKCPKC K+VY+AE + G+ +HK CF C C K LDST ++
Sbjct: 2 MSSKYGGGPKCPKCDKTVYSAEGQALLGMTFHKRCFTCTTCNKSLDSTTVAD 53
>SB_57743| Best HMM Match : LIM (HMM E-Value=1.7e-08)
Length = 197
Score = 56.8 bits (131), Expect = 1e-08
Identities = 23/45 (51%), Positives = 27/45 (60%)
Frame = +3
Query: 144 KCPKCGKSVYAAEERVAGGLKWHKMCFKCGLCQKLLDSTNCSEHE 278
KCP+C K VY AE+ A G WHK C C C K LDSTN + +
Sbjct: 4 KCPRCEKPVYFAEQAKANGKSWHKPCLTCKHCNKRLDSTNLTNKD 48
>SB_40829| Best HMM Match : LIM (HMM E-Value=1.7e-14)
Length = 82
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/63 (34%), Positives = 33/63 (52%)
Frame = +3
Query: 129 PADNPKCPKCGKSVYAAEERVAGGLKWHKMCFKCGLCQKLLDSTNCSEHEGELYCKVCHA 308
P+ C CG+ E + A G ++H CF+C +C++ L ST+ ELYCK +
Sbjct: 5 PSSINYCATCGEPCIKTEYKYAIGKRFHNACFRCVVCEERL-STDFYARGSELYCKKDYL 63
Query: 309 RKF 317
KF
Sbjct: 64 SKF 66
>SB_38221| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 575
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/56 (32%), Positives = 26/56 (46%)
Frame = +3
Query: 144 KCPKCGKSVYAAEERVAGGLKWHKMCFKCGLCQKLLDSTNCSEHEGELYCKVCHAR 311
+C CG+ + + G WHK CF C C + L S S +G YC C+ +
Sbjct: 462 RCASCGEPLLEGGV-LYNGETWHKACFSCYFCHRSLASAAFSVRDGCRYCMECYGK 516
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +3
Query: 144 KCPKCGKSVYAAEERVA-GGLKWHKMCFKCGLCQKLLDSTNCSEHEGELYCKVCHARKF 317
+C CG+ + + R+ G WH+ CF+C C + + ++ + +C C+ KF
Sbjct: 401 ECFACGQMIDSGASRLEYSGNFWHENCFRCANCGEAIGTSGFVPKDDTFFCPGCYQSKF 459
Score = 33.1 bits (72), Expect = 0.19
Identities = 16/53 (30%), Positives = 21/53 (39%)
Frame = +3
Query: 144 KCPKCGKSVYAAEERVAGGLKWHKMCFKCGLCQKLLDSTNCSEHEGELYCKVC 302
+C C K++ E +HK CF C C + L S EL C C
Sbjct: 521 QCEICLKAIVGGEYYTLEESNFHKECFMCSRCGRSLASEGFVREGDELLCGDC 573
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/68 (20%), Positives = 29/68 (42%), Gaps = 3/68 (4%)
Frame = +3
Query: 123 FKPADNPKCPKCGKSVYAAEERVAGG--LKWHKMCFKCGLCQKLLDST-NCSEHEGELYC 293
FK + +C C + + ++ WH CF C +C++ L S + + ++ C
Sbjct: 331 FKDSYAHECEACHQKIGPESRDISSDDDRHWHDKCFICDICRRPLKSDGKFTFYRDQILC 390
Query: 294 KVCHARKF 317
C+ +
Sbjct: 391 NNCYVANY 398
>SB_22219| Best HMM Match : LIM (HMM E-Value=8.2e-22)
Length = 163
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/56 (32%), Positives = 26/56 (46%)
Frame = +3
Query: 144 KCPKCGKSVYAAEERVAGGLKWHKMCFKCGLCQKLLDSTNCSEHEGELYCKVCHAR 311
+C CG+ + + G WHK CF C C + L S S +G YC C+ +
Sbjct: 50 RCASCGEPLLEGGV-LYNGETWHKACFSCYFCHRSLASAAFSVRDGCRYCMECYGK 104
Score = 33.5 bits (73), Expect = 0.14
Identities = 10/37 (27%), Positives = 19/37 (51%)
Frame = +3
Query: 207 WHKMCFKCGLCQKLLDSTNCSEHEGELYCKVCHARKF 317
WH+ CF+C C + + ++ + +C C+ KF
Sbjct: 11 WHENCFRCANCGEAIGTSGFVPKDDTFFCPGCYQSKF 47
Score = 33.1 bits (72), Expect = 0.19
Identities = 16/53 (30%), Positives = 21/53 (39%)
Frame = +3
Query: 144 KCPKCGKSVYAAEERVAGGLKWHKMCFKCGLCQKLLDSTNCSEHEGELYCKVC 302
+C C K++ E +HK CF C C + L S EL C C
Sbjct: 109 QCEICLKAIVGGEYYTLEESNFHKECFMCSRCGRSLASEGFVREGDELLCGDC 161
>SB_1883| Best HMM Match : LIM (HMM E-Value=2.20004e-42)
Length = 328
Score = 42.3 bits (95), Expect = 3e-04
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +3
Query: 144 KCPKCGKSVYAAEERVAGGLKWHKMCFKCGLC-QKLLDSTNCSEHEGELYCKVCHARKF 317
+C C + G WH C KC LC +L C +G++YCK +AR+F
Sbjct: 101 RCVGCEAKIVDRYLVKVSGRAWHTKCLKCCLCSDELGREATCYTKDGKIYCKADYARQF 159
Score = 36.3 bits (80), Expect = 0.020
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +3
Query: 144 KCPKCGKSVYAAE-ERVAGGLKWHKMCFKCGLCQKLLDS-TNCSEHEGELYCKV 299
KC +CG+S++A + R A +H CF C C++ L + + +G + CK+
Sbjct: 162 KCARCGRSIHANDWVRRAKNCVYHLACFACDNCKRQLSTGEEFALKDGHVLCKL 215
>SB_40925| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 30
Score = 38.3 bits (85), Expect = 0.005
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +3
Query: 204 KWHKMCFKCGLCQKLLDSTNCSEHE 278
K+HK CF C C+K LDSTN + H+
Sbjct: 5 KFHKKCFSCKDCRKKLDSTNAASHD 29
>SB_30891| Best HMM Match : LIM (HMM E-Value=4.40008e-43)
Length = 511
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +3
Query: 147 CPKCGKSVYAAEERVAGGLKWHKMCFKCGLCQKLLDS-TNCSEHEGELYCKVCHARKF 317
C CG + +A +WH C KC C+ LD+ C +G + C+ + R+F
Sbjct: 248 CAGCGSRILERFYLMAVDQEWHADCLKCSDCELRLDNELTCFSKDGVILCREDYYRRF 305
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +3
Query: 144 KCPKCGKSVYAAEERV-AGGLKWHKMCFKCGLCQKLLDSTNCSEHEG-ELYCK 296
KC C +++ + E + A +H CF C C+++L + G +YCK
Sbjct: 309 KCSSCSQAISSKELVMRARDQVYHVNCFACDRCKRMLATGEYFGMRGIRIYCK 361
>SB_26948| Best HMM Match : LIM (HMM E-Value=2.3e-39)
Length = 351
Score = 37.5 bits (83), Expect = 0.009
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = +3
Query: 147 CPKCGKSVYAAEERVAGGLKWHKMCFKCGLCQKLLDSTNCSEHEGELYCKVCHARKF 317
C KC + + + + AG +H CF C C K L + ++ EG C+ C+ ++
Sbjct: 237 CVKCNQVIKTSSVQHAGST-YHSECFTCHHCDKPLAGSPFTKQEGRNVCQNCYRERY 292
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/54 (29%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Frame = +3
Query: 144 KCPKCGKSVYAAEERVAGGLKW-HKMCFKCGLCQKLLDSTNCSEHEGELYCKVC 302
+C C + + VA K+ H+ CF C C K L +GE C C
Sbjct: 295 RCGACHNLIEGNTKFVAYDEKYFHRECFTCCKCNKPLAGEKFRIRDGEKICLPC 348
Score = 27.5 bits (58), Expect = 9.2
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +3
Query: 183 ERVAGGLKWHKMCFKCGLCQKLL-DSTNCSEHEGELYC 293
ER+ WH CF C +LL D CS+ + E+YC
Sbjct: 97 ERLGPDSCWHVKCFTCEEDGELLVDLIYCSK-DDEIYC 133
>SB_20358| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1323
Score = 37.1 bits (82), Expect = 0.011
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = +3
Query: 108 ARTMPFKPADNPKCPKCGKSVYAAEERVAGGLKWHKMCFKCGLCQKLLDS-TNCSEHEGE 284
A M P+ C CG+ VY E VA +H+ CF+C C L + T E E
Sbjct: 598 APMMQCMPSLGTACLICGERVYLMERLVAERRLFHRACFRCSRCNSSLRAGTYTFFPESE 657
Query: 285 LYC 293
+C
Sbjct: 658 SFC 660
>SB_29553| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 573
Score = 36.7 bits (81), Expect = 0.015
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Frame = +3
Query: 135 DNPKCPKCGKSVYAAEERVAGGLKWHKMCFKCGLCQKLLDSTN-C--SEHEGELYC 293
++ +C CGKSV E +HK CF C +C L+ N C +H+ + YC
Sbjct: 241 ESNRCDSCGKSVDILERVAVENHVFHKACFVCAICNVWLNHFNYCFVPDHD-KFYC 295
>SB_9083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 180
Score = 36.3 bits (80), Expect = 0.020
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +3
Query: 147 CPKCGKSVYAAEERVAGGLKWHKMCFKCGLCQKLLDSTNCSEHEGELYCK 296
C CG+++ ++ +A +WH CF C C LL S +G+ YC+
Sbjct: 89 CAGCGEAIKGSQALLALEKQWHLWCFSCTKCHCLL-SLEYMGMDGKPYCE 137
>SB_26945| Best HMM Match : PET (HMM E-Value=7.4e-34)
Length = 621
Score = 35.5 bits (78), Expect = 0.035
Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Frame = +3
Query: 147 CPKCGKSVYAAEERV----AGGLK-WHKMCFKCGLCQKLLDSTNCSEHEGELYCKVCHAR 311
C +C K V E V AG K WH CF C +C LL +G +YC +A
Sbjct: 309 CFRCSKPVMTGEVAVFASRAGEDKCWHPGCFVCTVCNNLLVDLIYFYKDGVIYCGRHYAE 368
Query: 312 KF 317
+F
Sbjct: 369 QF 370
Score = 30.7 bits (66), Expect = 0.99
Identities = 13/59 (22%), Positives = 25/59 (42%)
Frame = +3
Query: 141 PKCPKCGKSVYAAEERVAGGLKWHKMCFKCGLCQKLLDSTNCSEHEGELYCKVCHARKF 317
P+C C + +++ A WH+ F C C + L G+ +C C+ + +
Sbjct: 372 PRCAACDELIFSETYTQAEDRNWHQRHFCCLECDRDLGGQLYVARGGQPHCLECYDKYY 430
>SB_30367| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 35.1 bits (77), Expect = 0.046
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 207 WHKMCFKCGLCQKLLDSTNCSEHEGELYCKVCHARKF 317
+H CF C C+K L +EHEG C C+ ++
Sbjct: 82 YHSDCFVCSRCRKPLAGKTFTEHEGSWVCDDCYHDRY 118
>SB_15482| Best HMM Match : LIM (HMM E-Value=0)
Length = 349
Score = 34.3 bits (75), Expect = 0.080
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +3
Query: 207 WHKMCFKCGLCQKLLDSTNCSEHEGELYCKVCHARKF 317
WH+ C +C +C+ L S +C + +LYC+ + + F
Sbjct: 66 WHESCLQCCICRSQL-SRSCFSKDRKLYCRTDYEKVF 101
>SB_13716| Best HMM Match : LIM (HMM E-Value=0)
Length = 401
Score = 33.9 bits (74), Expect = 0.11
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +3
Query: 147 CPKCGKSVYAAEERVAGGLKWHKMCFKCGLCQKLLDSTNCSEHEGELYCK 296
C C K + + A G WH F C C+ L + N E +G+ YC+
Sbjct: 282 CAACNKPIIG-QVCTALGKTWHPEHFACVACEAPLGTQNFFERDGKPYCE 330
>SB_26947| Best HMM Match : LIM (HMM E-Value=6.2e-32)
Length = 648
Score = 33.5 bits (73), Expect = 0.14
Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 3/52 (5%)
Frame = +3
Query: 147 CPKCGKSVYAAEERVA-GGLKWHKM--CFKCGLCQKLLDSTNCSEHEGELYC 293
C CG+ + ++A G WH CF C C K L GE+YC
Sbjct: 203 CDSCGEPIEPDASQMAHNGQHWHATNECFSCCTCGKALLGLPFLPKSGEIYC 254
Score = 33.1 bits (72), Expect = 0.19
Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 5/59 (8%)
Frame = +3
Query: 147 CPKCGKSVYAAE-----ERVAGGLKWHKMCFKCGLCQKLLDSTNCSEHEGELYCKVCHA 308
C +CG+ V A R WH CF C C++LL + ++YC HA
Sbjct: 78 CKECGECVTAGSMAVYASRAGQHTCWHASCFICTTCKELLVDLIYFYKDSKVYCGRHHA 136
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/55 (27%), Positives = 22/55 (40%)
Frame = +3
Query: 141 PKCPKCGKSVYAAEERVAGGLKWHKMCFKCGLCQKLLDSTNCSEHEGELYCKVCH 305
P+C C + ++A + A WH F C C L + + YC CH
Sbjct: 141 PRCAACDEIIFAEQCTEAEDSCWHVQHFCCFECDCPLGGMRYVMRDNKPYC--CH 193
>SB_2217| Best HMM Match : LIM (HMM E-Value=1.2e-40)
Length = 434
Score = 33.5 bits (73), Expect = 0.14
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +3
Query: 207 WHKMCFKCGLCQKLLDSTNCSEHEGELYCKVCHARKF 317
WH C +C C+ L + C EG+L+CK R++
Sbjct: 25 WHAQCVQCSDCKCPL-TERCFSREGKLFCKTDFYRRY 60
>SB_5864| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 325
Score = 32.7 bits (71), Expect = 0.25
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 147 CPKCGKSVYAAEERVAGGLKWHKMCFKCGLCQK 245
C CGK + A ER+A ++ HK F C +C+K
Sbjct: 106 CGNCGKDM-ATPERLAKHMETHKKKFGCDICEK 137
>SB_177| Best HMM Match : SBP_bac_3 (HMM E-Value=0.032)
Length = 619
Score = 30.7 bits (66), Expect = 0.99
Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 2/89 (2%)
Frame = +1
Query: 10 ELRAQQSRHHRPVTVHASGXSXLVPTRXTGXVKRAQCLSNPLITRSARNVANQFTPLRSA 189
EL+A + HA + L P +K Q L +P R + FT LRS
Sbjct: 244 ELQAGVKHWEKKGVAHAHSTTILQPRVFEAFLK--QDLPHPRRLRIVTIEHHPFTMLRSP 301
Query: 190 WLVASNGTKCAS--NVVCAKNCWTQPTAQ 270
GTKC+S +V+C + +P+ Q
Sbjct: 302 DFSNKMGTKCSSENSVLCLRYSKNKPSGQ 330
>SB_34203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 152
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = +3
Query: 147 CPKCGKSVYAAEERV--AGGLKWHKMCFKCGLCQKLLDSTNCSEHEGELYCK 296
C CG+ V E+RV A G WH F C C+K E +G YC+
Sbjct: 81 CFCCGRPV---EDRVVHALGKAWHVEHFVCAKCEKPFYGHRYYERKGLAYCE 129
Score = 29.9 bits (64), Expect = 1.7
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +3
Query: 207 WHKMCFKCGLCQKLLDSTNCSEHEGELY 290
WH CF+C +C L T ++ G Y
Sbjct: 33 WHPDCFRCEICNDCLADTGFVKNAGSTY 60
>SB_20426| Best HMM Match : LIM (HMM E-Value=3e-35)
Length = 160
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/65 (26%), Positives = 24/65 (36%), Gaps = 2/65 (3%)
Frame = +3
Query: 129 PADNPKCPKCGKSVYAAEERVAGGLKWHKMCFKCGLCQKLLDSTNCSEHE--GELYCKVC 302
P + C C + + A G WH+ C KC C L S + + CK
Sbjct: 11 PVERRLCRSCNEPISDKYVLQALGSYWHEGCLKCECCDSRLGDIGSSLYSKANLILCKRD 70
Query: 303 HARKF 317
+ R F
Sbjct: 71 YLRLF 75
>SB_20707| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 705
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +3
Query: 207 WHKMCFKCGLCQKLLDSTNCSEHEGELYC 293
WHK CFKC C L+ ++ YC
Sbjct: 213 WHKGCFKCESCGMTLNMKTYKGYQKLPYC 241
>SB_59568| Best HMM Match : TPP_enzyme_C (HMM E-Value=3.6e-34)
Length = 521
Score = 28.7 bits (61), Expect = 4.0
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -3
Query: 303 GTLCSTVHPRALSSWLSPAIFGT 235
GT + PRA SWL P FGT
Sbjct: 362 GTAAYILRPRAPLSWLDPGAFGT 384
>SB_20996| Best HMM Match : LIM (HMM E-Value=9e-22)
Length = 81
Score = 28.7 bits (61), Expect = 4.0
Identities = 12/38 (31%), Positives = 16/38 (42%)
Frame = +3
Query: 204 KWHKMCFKCGLCQKLLDSTNCSEHEGELYCKVCHARKF 317
K+H F C C K L+ E + YC C + F
Sbjct: 43 KFHPEHFVCAFCLKQLNKGTFKEQNDKPYCHPCFVKLF 80
>SB_57162| Best HMM Match : DUF1086 (HMM E-Value=3.4)
Length = 512
Score = 28.3 bits (60), Expect = 5.3
Identities = 17/77 (22%), Positives = 26/77 (33%)
Frame = +3
Query: 45 CNCXRVRXLXSRSDSTHRXS*ARTMPFKPADNPKCPKCGKSVYAAEERVAGGLKWHKMCF 224
C C + +T + +R + N CP CGK Y + K
Sbjct: 192 CICRAEKSFTRNGKTTKKYLYSRKWGIMESKNELCPNCGKCGYIKYYYLGLHEKLKNWFR 251
Query: 225 KCGLCQKLLDSTNCSEH 275
+C+K+L EH
Sbjct: 252 NLNMCRKMLSHWQEREH 268
>SB_34962| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 203
Score = 28.3 bits (60), Expect = 5.3
Identities = 17/77 (22%), Positives = 26/77 (33%)
Frame = +3
Query: 45 CNCXRVRXLXSRSDSTHRXS*ARTMPFKPADNPKCPKCGKSVYAAEERVAGGLKWHKMCF 224
C C + +T + +R + N CP CGK Y + K
Sbjct: 89 CICRAEKSFTRNGKTTKKYLYSRKWGIMESKNELCPNCGKCGYIKYYYLGLHEKLKNWFR 148
Query: 225 KCGLCQKLLDSTNCSEH 275
+C+K+L EH
Sbjct: 149 NLNMCRKMLSHWQEREH 165
>SB_22733| Best HMM Match : Ribosomal_S27 (HMM E-Value=9.8)
Length = 203
Score = 28.3 bits (60), Expect = 5.3
Identities = 17/77 (22%), Positives = 26/77 (33%)
Frame = +3
Query: 45 CNCXRVRXLXSRSDSTHRXS*ARTMPFKPADNPKCPKCGKSVYAAEERVAGGLKWHKMCF 224
C C + +T + +R + N CP CGK Y + K
Sbjct: 89 CICRAEKSFTRNGKTTKKYLYSRKWGIMESKNELCPNCGKCGYIKYYYLGLHEKLKNWFR 148
Query: 225 KCGLCQKLLDSTNCSEH 275
+C+K+L EH
Sbjct: 149 NLNMCRKMLSHWQEREH 165
>SB_9634| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 587
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +3
Query: 144 KCPKCGKSVYAAEERVAGGLKWHKMCFKCGLC 239
KCP C K E+R + HK ++CG C
Sbjct: 188 KCPHCKKVFSDKEKRKDHYISAHKKEYRCGKC 219
>SB_12399| Best HMM Match : DUF885 (HMM E-Value=2.3e-08)
Length = 718
Score = 28.3 bits (60), Expect = 5.3
Identities = 17/77 (22%), Positives = 26/77 (33%)
Frame = +3
Query: 45 CNCXRVRXLXSRSDSTHRXS*ARTMPFKPADNPKCPKCGKSVYAAEERVAGGLKWHKMCF 224
C C + +T + +R + N CP CGK Y + K
Sbjct: 117 CICRAEKSFTRNGKTTKKYLYSRKWGIMESKNELCPNCGKCGYIKYYYLGLHEKLKNWFR 176
Query: 225 KCGLCQKLLDSTNCSEH 275
+C+K+L EH
Sbjct: 177 NLNMCRKMLSHWQEREH 193
>SB_43770| Best HMM Match : PET (HMM E-Value=8.8e-24)
Length = 251
Score = 27.9 bits (59), Expect = 7.0
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +3
Query: 183 ERVAGGLKWHKMCFKCGLCQKLL-DSTNCSEHEGELYC 293
ER+ WH CF C +LL D CS+ + E+YC
Sbjct: 210 ERLGPDSCWHVKCFTCEEDGELLVDLIYCSK-DAEIYC 246
>SB_16305| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1122
Score = 27.9 bits (59), Expect = 7.0
Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Frame = +3
Query: 75 SRSDSTHRXS*ARTMPFKPADNP-KCPKCGKSVYAAEERVAGGLKWHKMCFKCGLCQK 245
S+S +T R S R M D P +C CGKS E K +KC +C K
Sbjct: 626 SKSFTTSR-SMVRHMLTHSEDRPYQCDVCGKSYKCYEALTKHTTTHSKKPYKCNVCDK 682
>SB_4754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 850
Score = 27.9 bits (59), Expect = 7.0
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1
Query: 37 HRPVTVHASGXSXLVPTR 90
HRP+ +HASG L PTR
Sbjct: 255 HRPLQLHASGQRGLQPTR 272
>SB_40368| Best HMM Match : SASP_gamma (HMM E-Value=2.3)
Length = 325
Score = 27.9 bits (59), Expect = 7.0
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +3
Query: 9 RTSRTAVSASPPCNCXRVRXLXSRSDSTHRXS*ARTMPFKPADNPKCP 152
R SR +PP +++ L ++ HR S T P +P NP CP
Sbjct: 27 RRSRETPPETPPV---QLKHLAGPAEKPHRPS-RETPPVQPRRNPTCP 70
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,346,339
Number of Sequences: 59808
Number of extensions: 325757
Number of successful extensions: 880
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 790
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 877
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1524174750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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